Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2341454Fold a.175: Orange carotenoid protein, N-terminal domain [81929] (1 superfamily)
    multihelical; array
  4. 2341455Superfamily a.175.1: Orange carotenoid protein, N-terminal domain [81930] (2 families) (S)
    duplication: contains four structural repeats arranged into two intertwined 4-helical subdomains
    automatically mapped to Pfam PF09150
  5. 2341456Family a.175.1.1: Orange carotenoid protein, N-terminal domain [81931] (2 proteins)
  6. 2341461Protein automated matches [227037] (2 species)
    not a true protein

Species:

  1. 2341462Synechocystis sp. [TaxId:1111708] [275030] (4 PDB entries)
    1. Domain for 4xb5:
    2. Domains for 5tuw:
      1. 2341466Domain d5tuwa1: 5tuw A:3-173 [335294]
        Other proteins in same PDB: d5tuwa2, d5tuwb2, d5tuwc2, d5tuwd2, d5tuwe2, d5tuwf2
        automated match to d1m98a1
        complexed with eq3, gol
      2. 2341467Domain d5tuwb1: 5tuw B:3-173 [335183]
        Other proteins in same PDB: d5tuwa2, d5tuwb2, d5tuwc2, d5tuwd2, d5tuwe2, d5tuwf2
        automated match to d1m98a1
        complexed with eq3, gol
      3. 2341468Domain d5tuwc1: 5tuw C:3-173 [335173]
        Other proteins in same PDB: d5tuwa2, d5tuwb2, d5tuwc2, d5tuwd2, d5tuwe2, d5tuwf2
        automated match to d1m98a1
        complexed with eq3, gol
      4. 2341469Domain d5tuwd1: 5tuw D:2-173 [335190]
        Other proteins in same PDB: d5tuwa2, d5tuwb2, d5tuwc2, d5tuwd2, d5tuwe2, d5tuwf2
        automated match to d1m98a1
        complexed with eq3, gol
      5. 2341470Domain d5tuwe1: 5tuw E:3-173 [335279]
        Other proteins in same PDB: d5tuwa2, d5tuwb2, d5tuwc2, d5tuwd2, d5tuwe2, d5tuwf2
        automated match to d1m98a1
        complexed with eq3, gol
      6. 2341471Domain d5tuwf1: 5tuw F:3-173 [335181]
        Other proteins in same PDB: d5tuwa2, d5tuwb2, d5tuwc2, d5tuwd2, d5tuwe2, d5tuwf2
        automated match to d1m98a1
        complexed with eq3, gol
    3. Domain for 5tux:
    4. Domain for 5tv0:
  2. 2341472Synechocystis sp. [TaxId:1148] [225877] (6 PDB entries)
    1. Domains for 3i1v:
      1. 2341473Domain d3i1va1: 3i1v A:5-173 [305539]
        Other proteins in same PDB: d3i1va2, d3i1vb2
        automated match to d1m98a1
        complexed with gol, raw
      2. 2341474Domain d3i1vb1: 3i1v B:5-173 [305541]
        Other proteins in same PDB: d3i1va2, d3i1vb2
        automated match to d1m98a1
        complexed with gol, raw
    2. Domains for 3i1w:
      1. 2341481Domain d3i1wa1: 3i1w A:4-173 [305543]
        Other proteins in same PDB: d3i1wa2, d3i1wb2
        automated match to d1m98a1
        complexed with raw; mutant
      2. 2341482Domain d3i1wb1: 3i1w B:4-173 [305545]
        Other proteins in same PDB: d3i1wa2, d3i1wb2
        automated match to d1m98a1
        complexed with raw; mutant
    3. Domains for 3i1x:
      1. 2341475Domain d3i1xa1: 3i1x A:4-173 [305547]
        Other proteins in same PDB: d3i1xa2, d3i1xb2
        automated match to d1m98a1
        complexed with gol, raw; mutant
      2. 2341476Domain d3i1xb1: 3i1x B:5-173 [305549]
        Other proteins in same PDB: d3i1xa2, d3i1xb2
        automated match to d1m98a1
        complexed with gol, raw; mutant
    4. Domains for 3mg1:
      1. 2341477Domain d3mg1a1: 3mg1 A:3-173 [213237]
        Other proteins in same PDB: d3mg1a2, d3mg1b2
        automated match to d1m98a1
        complexed with ech, gol
      2. 2341478Domain d3mg1b1: 3mg1 B:3-173 [213239]
        Other proteins in same PDB: d3mg1a2, d3mg1b2
        automated match to d1m98a1
        complexed with ech, gol
    5. Domains for 3mg2:
      1. 2341483Domain d3mg2a1: 3mg2 A:4-173 [213241]
        Other proteins in same PDB: d3mg2a2, d3mg2b2
        automated match to d1m98a1
        complexed with ech; mutant
      2. 2341484Domain d3mg2b1: 3mg2 B:4-173 [213243]
        Other proteins in same PDB: d3mg2a2, d3mg2b2
        automated match to d1m98a1
        complexed with ech; mutant
    6. Domains for 3mg3:
      1. 2341479Domain d3mg3a1: 3mg3 A:4-173 [213245]
        Other proteins in same PDB: d3mg3a2, d3mg3b2
        automated match to d1m98a1
        complexed with ech, gol; mutant
      2. 2341480Domain d3mg3b1: 3mg3 B:3-173 [213247]
        Other proteins in same PDB: d3mg3a2, d3mg3b2
        automated match to d1m98a1
        complexed with ech, gol; mutant

More info for Protein automated matches from a.175.1.1: Orange carotenoid protein, N-terminal domain

Timeline for Protein automated matches from a.175.1.1: Orange carotenoid protein, N-terminal domain: