Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2054165Fold b.43: Reductase/isomerase/elongation factor common domain [50412] (4 superfamilies)
    barrel, closed; n=6, S=10; greek-key
  4. 2054166Superfamily b.43.2: FucI/AraA C-terminal domain-like [50443] (3 families) (S)
  5. 2054185Family b.43.2.0: automated matches [227252] (1 protein)
    not a true family
  6. 2054186Protein automated matches [227032] (4 species)
    not a true protein

Species:

  1. 2054187Escherichia coli K-12 [TaxId:83333] [226394] (1 PDB entry)
  2. 2054191Geobacillus kaustophilus [TaxId:235909] [275932] (3 PDB entries)
    1. Domains for 4r1o:
      1. 2054204Domain d4r1oa2: 4r1o A:328-497 [275937]
        Other proteins in same PDB: d4r1oa1, d4r1ob1, d4r1oc1, d4r1od1, d4r1oe1, d4r1of1
        automated match to d2ajta1
      2. 2054205Domain d4r1ob2: 4r1o B:328-496 [275933]
        Other proteins in same PDB: d4r1oa1, d4r1ob1, d4r1oc1, d4r1od1, d4r1oe1, d4r1of1
        automated match to d2ajta1
      3. 2054206Domain d4r1oc2: 4r1o C:328-497 [275936]
        Other proteins in same PDB: d4r1oa1, d4r1ob1, d4r1oc1, d4r1od1, d4r1oe1, d4r1of1
        automated match to d2ajta1
      4. 2054207Domain d4r1od2: 4r1o D:328-497 [275939]
        Other proteins in same PDB: d4r1oa1, d4r1ob1, d4r1oc1, d4r1od1, d4r1oe1, d4r1of1
        automated match to d2ajta1
      5. 2054208Domain d4r1oe2: 4r1o E:328-496 [275943]
        Other proteins in same PDB: d4r1oa1, d4r1ob1, d4r1oc1, d4r1od1, d4r1oe1, d4r1of1
        automated match to d2ajta1
      6. 2054209Domain d4r1of2: 4r1o F:328-496 [275941]
        Other proteins in same PDB: d4r1oa1, d4r1ob1, d4r1oc1, d4r1od1, d4r1oe1, d4r1of1
        automated match to d2ajta1
    2. Domains for 4r1p:
      1. 2054198Domain d4r1pa2: 4r1p A:328-496 [275957]
        Other proteins in same PDB: d4r1pa1, d4r1pb1, d4r1pc1, d4r1pd1, d4r1pe1, d4r1pf1
        automated match to d2ajta1
        complexed with mn
      2. 2054199Domain d4r1pb2: 4r1p B:328-494 [275969]
        Other proteins in same PDB: d4r1pa1, d4r1pb1, d4r1pc1, d4r1pd1, d4r1pe1, d4r1pf1
        automated match to d2ajta1
        complexed with mn
      3. 2054200Domain d4r1pc2: 4r1p C:328-496 [275963]
        Other proteins in same PDB: d4r1pa1, d4r1pb1, d4r1pc1, d4r1pd1, d4r1pe1, d4r1pf1
        automated match to d2ajta1
        complexed with mn
      4. 2054201Domain d4r1pd2: 4r1p D:328-496 [275971]
        Other proteins in same PDB: d4r1pa1, d4r1pb1, d4r1pc1, d4r1pd1, d4r1pe1, d4r1pf1
        automated match to d2ajta1
        complexed with mn
      5. 2054202Domain d4r1pe2: 4r1p E:328-496 [275967]
        Other proteins in same PDB: d4r1pa1, d4r1pb1, d4r1pc1, d4r1pd1, d4r1pe1, d4r1pf1
        automated match to d2ajta1
        complexed with mn
      6. 2054203Domain d4r1pf2: 4r1p F:328-496 [275965]
        Other proteins in same PDB: d4r1pa1, d4r1pb1, d4r1pc1, d4r1pd1, d4r1pe1, d4r1pf1
        automated match to d2ajta1
        complexed with mn
    3. Domains for 4r1q:
      1. 2054192Domain d4r1qa2: 4r1q A:328-496 [275947]
        Other proteins in same PDB: d4r1qa1, d4r1qb1, d4r1qc1, d4r1qd1, d4r1qe1, d4r1qf1
        automated match to d2ajta1
        complexed with mn, sst
      2. 2054193Domain d4r1qb2: 4r1q B:328-497 [275945]
        Other proteins in same PDB: d4r1qa1, d4r1qb1, d4r1qc1, d4r1qd1, d4r1qe1, d4r1qf1
        automated match to d2ajta1
        complexed with mn, sst
      3. 2054194Domain d4r1qc2: 4r1q C:328-497 [275952]
        Other proteins in same PDB: d4r1qa1, d4r1qb1, d4r1qc1, d4r1qd1, d4r1qe1, d4r1qf1
        automated match to d2ajta1
        complexed with mn, sst
      4. 2054195Domain d4r1qd2: 4r1q D:328-496 [275955]
        Other proteins in same PDB: d4r1qa1, d4r1qb1, d4r1qc1, d4r1qd1, d4r1qe1, d4r1qf1
        automated match to d2ajta1
        complexed with mn, sst
      5. 2054196Domain d4r1qe2: 4r1q E:328-497 [275961]
        Other proteins in same PDB: d4r1qa1, d4r1qb1, d4r1qc1, d4r1qd1, d4r1qe1, d4r1qf1
        automated match to d2ajta1
        complexed with mn, sst
      6. 2054197Domain d4r1qf2: 4r1q F:328-496 [275959]
        Other proteins in same PDB: d4r1qa1, d4r1qb1, d4r1qc1, d4r1qd1, d4r1qe1, d4r1qf1
        automated match to d2ajta1
        complexed with mn, sst
  3. 2054210Geobacillus pallidus [TaxId:33936] [225863] (3 PDB entries)
    1. Domains for 3a9r:
      1. 2054214Domain d3a9ra2: 3a9r A:361-590 [208161]
        Other proteins in same PDB: d3a9ra1, d3a9rb1, d3a9rc1
        automated match to d1fuia1
        complexed with mn, mrd
      2. 2054215Domain d3a9rb2: 3a9r B:361-590 [208163]
        Other proteins in same PDB: d3a9ra1, d3a9rb1, d3a9rc1
        automated match to d1fuia1
        complexed with mn, mrd
      3. 2054216Domain d3a9rc2: 3a9r C:361-590 [208165]
        Other proteins in same PDB: d3a9ra1, d3a9rb1, d3a9rc1
        automated match to d1fuia1
        complexed with mn, mrd
    2. Domains for 3a9s:
      1. 2054211Domain d3a9sa2: 3a9s A:361-590 [208167]
        Other proteins in same PDB: d3a9sa1, d3a9sb1, d3a9sc1
        automated match to d1fuia1
        complexed with gol, mn
      2. 2054212Domain d3a9sb2: 3a9s B:361-590 [208169]
        Other proteins in same PDB: d3a9sa1, d3a9sb1, d3a9sc1
        automated match to d1fuia1
        complexed with gol, mn
      3. 2054213Domain d3a9sc2: 3a9s C:361-590 [208171]
        Other proteins in same PDB: d3a9sa1, d3a9sb1, d3a9sc1
        automated match to d1fuia1
        complexed with gol, mn
    3. Domains for 3a9t:
      1. 2054217Domain d3a9ta2: 3a9t A:361-590 [208173]
        Other proteins in same PDB: d3a9ta1, d3a9tb1, d3a9tc1
        automated match to d1fuia1
        complexed with foc, mn
      2. 2054218Domain d3a9tb2: 3a9t B:361-590 [208175]
        Other proteins in same PDB: d3a9ta1, d3a9tb1, d3a9tc1
        automated match to d1fuia1
        complexed with foc, mn
      3. 2054219Domain d3a9tc2: 3a9t C:361-590 [208177]
        Other proteins in same PDB: d3a9ta1, d3a9tb1, d3a9tc1
        automated match to d1fuia1
        complexed with foc, mn
  4. 2054220Streptococcus pneumoniae [TaxId:170187] [229525] (3 PDB entries)
    1. Domains for 4c20:
      1. 2054221Domain d4c20a2: 4c20 A:354-588 [229530]
        Other proteins in same PDB: d4c20a1, d4c20b1, d4c20b3
        automated match to d1fuia1
        complexed with edo, mn, so4, trs
      2. 2054222Domain d4c20b2: 4c20 B:354-588 [235850]
        Other proteins in same PDB: d4c20a1, d4c20b1, d4c20b3
        automated match to d4c20a2
        complexed with edo, mn, so4, trs
    2. Domains for 4c21:
      1. 2054223Domain d4c21a2: 4c21 A:354-588 [229526]
        Other proteins in same PDB: d4c21a1, d4c21b1, d4c21b3
        automated match to d1fuia1
        complexed with edo, foc, mn
      2. 2054224Domain d4c21b2: 4c21 B:354-588 [235858]
        Other proteins in same PDB: d4c21a1, d4c21b1, d4c21b3
        automated match to d4c21a2
        complexed with edo, foc, mn
    3. Domains for 4c22:
      1. 2054225Domain d4c22a2: 4c22 A:354-588 [229528]
        Other proteins in same PDB: d4c22a1, d4c22b1, d4c22b3
        automated match to d1fuia1
        complexed with cvu, edo, fuc, mn
      2. 2054226Domain d4c22b2: 4c22 B:354-588 [235856]
        Other proteins in same PDB: d4c22a1, d4c22b1, d4c22b3
        automated match to d4c22a2
        complexed with cvu, edo, fuc, mn

More info for Protein automated matches from b.43.2.0: automated matches

Timeline for Protein automated matches from b.43.2.0: automated matches: