Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2326510Fold a.74: Cyclin-like [47953] (1 superfamily)
    core: 5 helices; one helix is surrounded by the others
  4. 2326511Superfamily a.74.1: Cyclin-like [47954] (4 families) (S)
    duplication: consists of two domains of this fold
  5. 2326512Family a.74.1.1: Cyclin [47955] (9 protein domains)
  6. 2326968Protein automated matches [227027] (3 species)
    not a true protein

Species:

  1. 2326969Cow (Bos taurus) [TaxId:9913] [226306] (3 PDB entries)
    1. Domains for 3tnw:
      1. 2326970Domain d3tnwb1: 3tnw B:176-308 [216908]
        Other proteins in same PDB: d3tnwa1, d3tnwa2, d3tnwc_
        automated match to d3ddqb1
        complexed with f18, na
      2. 2326971Domain d3tnwb2: 3tnw B:309-432 [216909]
        Other proteins in same PDB: d3tnwa1, d3tnwa2, d3tnwc_
        automated match to d1vina2
        complexed with f18, na
      3. 2326972Domain d3tnwd1: 3tnw D:176-308 [216911]
        Other proteins in same PDB: d3tnwa1, d3tnwa2, d3tnwc_
        automated match to d3ddqb1
        complexed with f18, na
      4. 2326973Domain d3tnwd2: 3tnw D:309-432 [216912]
        Other proteins in same PDB: d3tnwa1, d3tnwa2, d3tnwc_
        automated match to d1vina2
        complexed with f18, na
    2. Domains for 4bco:
      1. 2326974Domain d4bcob1: 4bco B:175-308 [219433]
        Other proteins in same PDB: d4bcoa1, d4bcoa2, d4bcoc1, d4bcoc2
        automated match to d2cchb1
        complexed with sgm, so4, t6q
      2. 2326975Domain d4bcob2: 4bco B:309-432 [219434]
        Other proteins in same PDB: d4bcoa1, d4bcoa2, d4bcoc1, d4bcoc2
        automated match to d2cchb2
        complexed with sgm, so4, t6q
      3. 2326976Domain d4bcod1: 4bco D:177-308 [219436]
        Other proteins in same PDB: d4bcoa1, d4bcoa2, d4bcoc1, d4bcoc2
        automated match to d2cchb1
        complexed with sgm, so4, t6q
      4. 2326977Domain d4bcod2: 4bco D:309-432 [219437]
        Other proteins in same PDB: d4bcoa1, d4bcoa2, d4bcoc1, d4bcoc2
        automated match to d2cchb2
        complexed with sgm, so4, t6q
    3. Domains for 4bcq:
      1. 2326978Domain d4bcqb1: 4bcq B:176-308 [219439]
        Other proteins in same PDB: d4bcqa1, d4bcqa2, d4bcqb3, d4bcqc1, d4bcqc2
        automated match to d2cchb1
        complexed with tjf
      2. 2326979Domain d4bcqb2: 4bcq B:309-431 [219440]
        Other proteins in same PDB: d4bcqa1, d4bcqa2, d4bcqb3, d4bcqc1, d4bcqc2
        automated match to d2cchb2
        complexed with tjf
      3. 2326980Domain d4bcqd1: 4bcq D:176-308 [219442]
        Other proteins in same PDB: d4bcqa1, d4bcqa2, d4bcqb3, d4bcqc1, d4bcqc2
        automated match to d2cchb1
        complexed with tjf
      4. 2326981Domain d4bcqd2: 4bcq D:309-431 [219443]
        Other proteins in same PDB: d4bcqa1, d4bcqa2, d4bcqb3, d4bcqc1, d4bcqc2
        automated match to d2cchb2
        complexed with tjf
  2. 2326982Human (Homo sapiens) [TaxId:9606] [225840] (12 PDB entries)
    1. Domains for 3mia:
      1. 2327003Domain d3miab1: 3mia B:7-150 [247710]
        Other proteins in same PDB: d3miaa_
        automated match to d2pk2a2
        complexed with anp, mg, zn
      2. 2327004Domain d3miab2: 3mia B:151-261 [247711]
        Other proteins in same PDB: d3miaa_
        automated match to d2pk2a1
        complexed with anp, mg, zn
    2. Domains for 4bck:
      1. 2326987Domain d4bckb1: 4bck B:176-308 [219421]
        Other proteins in same PDB: d4bcka1, d4bcka2, d4bckc1, d4bckc2
        automated match to d2cchb1
        complexed with sgm, t3e
      2. 2326988Domain d4bckb2: 4bck B:309-432 [219422]
        Other proteins in same PDB: d4bcka1, d4bcka2, d4bckc1, d4bckc2
        automated match to d2cchb2
        complexed with sgm, t3e
      3. 2326989Domain d4bckd1: 4bck D:178-308 [219424]
        Other proteins in same PDB: d4bcka1, d4bcka2, d4bckc1, d4bckc2
        automated match to d2cchb1
        complexed with sgm, t3e
      4. 2326990Domain d4bckd2: 4bck D:309-430 [219425]
        Other proteins in same PDB: d4bcka1, d4bcka2, d4bckc1, d4bckc2
        automated match to d2cchb2
        complexed with sgm, t3e
    3. Domains for 4bcm:
      1. 2326995Domain d4bcmb1: 4bcm B:176-308 [201605]
        Other proteins in same PDB: d4bcma1, d4bcma2, d4bcmc1, d4bcmc2
        automated match to d2cchb1
        complexed with sgm, t7z
      2. 2326996Domain d4bcmb2: 4bcm B:309-432 [201606]
        Other proteins in same PDB: d4bcma1, d4bcma2, d4bcmc1, d4bcmc2
        automated match to d2cchb2
        complexed with sgm, t7z
      3. 2326997Domain d4bcmd1: 4bcm D:176-308 [201607]
        Other proteins in same PDB: d4bcma1, d4bcma2, d4bcmc1, d4bcmc2
        automated match to d2cchb1
        complexed with sgm, t7z
      4. 2326998Domain d4bcmd2: 4bcm D:309-428 [201608]
        Other proteins in same PDB: d4bcma1, d4bcma2, d4bcmc1, d4bcmc2
        automated match to d2cchb2
        complexed with sgm, t7z
    4. Domains for 4bcn:
      1. 2326983Domain d4bcnb1: 4bcn B:176-308 [219427]
        Other proteins in same PDB: d4bcna1, d4bcna2, d4bcnc1, d4bcnc2
        automated match to d2cchb1
        complexed with so4, t9n
      2. 2326984Domain d4bcnb2: 4bcn B:309-432 [219428]
        Other proteins in same PDB: d4bcna1, d4bcna2, d4bcnc1, d4bcnc2
        automated match to d2cchb2
        complexed with so4, t9n
      3. 2326985Domain d4bcnd1: 4bcn D:177-308 [219430]
        Other proteins in same PDB: d4bcna1, d4bcna2, d4bcnc1, d4bcnc2
        automated match to d2cchb1
        complexed with so4, t9n
      4. 2326986Domain d4bcnd2: 4bcn D:309-431 [219431]
        Other proteins in same PDB: d4bcna1, d4bcna2, d4bcnc1, d4bcnc2
        automated match to d2cchb2
        complexed with so4, t9n
    5. Domains for 4bcp:
      1. 2326991Domain d4bcpb1: 4bcp B:176-308 [201609]
        Other proteins in same PDB: d4bcpa1, d4bcpa2, d4bcpc1, d4bcpc2
        automated match to d2cchb1
        complexed with sgm, so4, t3c
      2. 2326992Domain d4bcpb2: 4bcp B:309-432 [201610]
        Other proteins in same PDB: d4bcpa1, d4bcpa2, d4bcpc1, d4bcpc2
        automated match to d2cchb2
        complexed with sgm, so4, t3c
      3. 2326993Domain d4bcpd1: 4bcp D:176-308 [201611]
        Other proteins in same PDB: d4bcpa1, d4bcpa2, d4bcpc1, d4bcpc2
        automated match to d2cchb1
        complexed with sgm, so4, t3c
      4. 2326994Domain d4bcpd2: 4bcp D:309-432 [201612]
        Other proteins in same PDB: d4bcpa1, d4bcpa2, d4bcpc1, d4bcpc2
        automated match to d2cchb2
        complexed with sgm, so4, t3c
    6. Domains for 4cjy:
      1. 2327009Domain d4cjya1: 4cjy A:22-157 [307119]
        Other proteins in same PDB: d4cjyc_, d4cjyd_
        automated match to d2i53a1
      2. 2327010Domain d4cjya2: 4cjy A:158-260 [307120]
        Other proteins in same PDB: d4cjyc_, d4cjyd_
        automated match to d2i53a2
      3. 2327011Domain d4cjyb1: 4cjy B:22-157 [307121]
        Other proteins in same PDB: d4cjyc_, d4cjyd_
        automated match to d2i53a1
      4. 2327012Domain d4cjyb2: 4cjy B:158-260 [307122]
        Other proteins in same PDB: d4cjyc_, d4cjyd_
        automated match to d2i53a2
    7. Domains for 4cxa:
      1. 2327019Domain d4cxab1: 4cxa B:20-157 [256728]
        Other proteins in same PDB: d4cxaa_, d4cxac_
        automated match to d2i53a1
        complexed with anp
      2. 2327020Domain d4cxab2: 4cxa B:158-265 [256729]
        Other proteins in same PDB: d4cxaa_, d4cxac_
        automated match to d2i53a2
        complexed with anp
      3. 2327021Domain d4cxad1: 4cxa D:22-157 [256730]
        Other proteins in same PDB: d4cxaa_, d4cxac_
        automated match to d2i53a1
        complexed with anp
      4. 2327022Domain d4cxad2: 4cxa D:158-262 [256731]
        Other proteins in same PDB: d4cxaa_, d4cxac_
        automated match to d2i53a2
        complexed with anp
    8. Domains for 4un0:
      1. 2327015Domain d4un0a1: 4un0 A:22-157 [263963]
        Other proteins in same PDB: d4un0c_, d4un0d_
        automated match to d2i53a1
      2. 2327016Domain d4un0a2: 4un0 A:158-260 [263964]
        Other proteins in same PDB: d4un0c_, d4un0d_
        automated match to d2i53a2
      3. 2327017Domain d4un0b1: 4un0 B:22-157 [263965]
        Other proteins in same PDB: d4un0c_, d4un0d_
        automated match to d2i53a1
      4. 2327018Domain d4un0b2: 4un0 B:158-260 [263966]
        Other proteins in same PDB: d4un0c_, d4un0d_
        automated match to d2i53a2
    9. Domains for 5acb:
      1. 2327005Domain d5acba1: 5acb A:20-157 [318434]
        Other proteins in same PDB: d5acbc_, d5acbd_
        automated match to d2i53a1
        complexed with 5i1
      2. 2327006Domain d5acba2: 5acb A:158-260 [318435]
        Other proteins in same PDB: d5acbc_, d5acbd_
        automated match to d2i53a2
        complexed with 5i1
      3. 2327007Domain d5acbb1: 5acb B:20-157 [318452]
        Other proteins in same PDB: d5acbc_, d5acbd_
        automated match to d2i53a1
        complexed with 5i1
      4. 2327008Domain d5acbb2: 5acb B:158-267 [318453]
        Other proteins in same PDB: d5acbc_, d5acbd_
        automated match to d2i53a2
        complexed with 5i1
    10. Domains for 5efq:
      1. 2326999Domain d5efqb1: 5efq B:21-157 [344210]
        Other proteins in same PDB: d5efqa_, d5efqc_
        automated match to d2i53a1
        complexed with adp, af3, mg
      2. 2327000Domain d5efqb2: 5efq B:158-262 [344211]
        Other proteins in same PDB: d5efqa_, d5efqc_
        automated match to d2i53a2
        complexed with adp, af3, mg
      3. 2327001Domain d5efqd1: 5efq D:21-157 [344212]
        Other proteins in same PDB: d5efqa_, d5efqc_
        automated match to d2i53a1
        complexed with adp, af3, mg
      4. 2327002Domain d5efqd2: 5efq D:158-259 [344213]
        Other proteins in same PDB: d5efqa_, d5efqc_
        automated match to d2i53a2
        complexed with adp, af3, mg
    11. Domains for 5l2w:
      1. 2327013Domain d5l2wb1: 5l2w B:88-227 [321842]
        Other proteins in same PDB: d5l2wa1, d5l2wa2
        automated match to d1w98b2
        complexed with 1qk, gol
      2. 2327014Domain d5l2wb2: 5l2w B:228-357 [321843]
        Other proteins in same PDB: d5l2wa1, d5l2wa2
        automated match to d1w98b1
        complexed with 1qk, gol
    12. Domains for 6b3e:
      1. 3049732Domain d6b3eb1: 6b3e B:20-157 [349794]
        Other proteins in same PDB: d6b3ea_, d6b3ec_
        automated match to d2i53a1
        complexed with cjm, edo, mg
      2. 3049733Domain d6b3eb2: 6b3e B:158-259 [349795]
        Other proteins in same PDB: d6b3ea_, d6b3ec_
        automated match to d2i53a2
        complexed with cjm, edo, mg
      3. 3049864Domain d6b3ed1: 6b3e D:21-157 [349926]
        Other proteins in same PDB: d6b3ea_, d6b3ec_
        automated match to d2i53a1
        complexed with cjm, edo, mg
      4. 3049865Domain d6b3ed2: 6b3e D:158-261 [349927]
        Other proteins in same PDB: d6b3ea_, d6b3ec_
        automated match to d2i53a2
        complexed with cjm, edo, mg
  3. 2327023Mouse (Mus musculus) [TaxId:10090] [226547] (2 PDB entries)
    1. Domains for 4i3z:
      1. 2327028Domain d4i3zb1: 4i3z B:175-309 [202534]
        Other proteins in same PDB: d4i3za_, d4i3zc_
        automated match to d1finb1
        complexed with adp, cl, gol, mg
      2. 2327029Domain d4i3zb2: 4i3z B:310-431 [202535]
        Other proteins in same PDB: d4i3za_, d4i3zc_
        automated match to d1oiub2
        complexed with adp, cl, gol, mg
      3. 2327030Domain d4i3zd1: 4i3z D:175-309 [202536]
        Other proteins in same PDB: d4i3za_, d4i3zc_
        automated match to d1finb1
        complexed with adp, cl, gol, mg
      4. 2327031Domain d4i3zd2: 4i3z D:310-431 [202537]
        Other proteins in same PDB: d4i3za_, d4i3zc_
        automated match to d1oiub2
        complexed with adp, cl, gol, mg
    2. Domains for 4ii5:
      1. 2327024Domain d4ii5b1: 4ii5 B:175-309 [223185]
        Other proteins in same PDB: d4ii5a_, d4ii5c_
        automated match to d1finb1
        complexed with adp, gol, mg
      2. 2327025Domain d4ii5b2: 4ii5 B:310-430 [223186]
        Other proteins in same PDB: d4ii5a_, d4ii5c_
        automated match to d1oiub2
        complexed with adp, gol, mg
      3. 2327026Domain d4ii5d1: 4ii5 D:175-309 [223188]
        Other proteins in same PDB: d4ii5a_, d4ii5c_
        automated match to d1finb1
        complexed with adp, gol, mg
      4. 2327027Domain d4ii5d2: 4ii5 D:310-431 [223189]
        Other proteins in same PDB: d4ii5a_, d4ii5c_
        automated match to d1oiub2
        complexed with adp, gol, mg

More info for Protein automated matches from a.74.1.1: Cyclin

Timeline for Protein automated matches from a.74.1.1: Cyclin: