Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2000824Fold a.74: Cyclin-like [47953] (1 superfamily)
    core: 5 helices; one helix is surrounded by the others
  4. 2000825Superfamily a.74.1: Cyclin-like [47954] (4 families) (S)
    duplication: consists of two domains of this fold
  5. 2000826Family a.74.1.1: Cyclin [47955] (9 protein domains)
  6. 2001266Protein automated matches [227027] (3 species)
    not a true protein

Species:

  1. 2001267Cow (Bos taurus) [TaxId:9913] [226306] (3 PDB entries)
    1. Domains for 3tnw:
      1. 2001268Domain d3tnwb1: 3tnw B:176-308 [216908]
        Other proteins in same PDB: d3tnwa1, d3tnwa2, d3tnwc_
        automated match to d3ddqb1
        complexed with f18, na
      2. 2001269Domain d3tnwb2: 3tnw B:309-432 [216909]
        Other proteins in same PDB: d3tnwa1, d3tnwa2, d3tnwc_
        automated match to d1vina2
        complexed with f18, na
      3. 2001270Domain d3tnwd1: 3tnw D:176-308 [216911]
        Other proteins in same PDB: d3tnwa1, d3tnwa2, d3tnwc_
        automated match to d3ddqb1
        complexed with f18, na
      4. 2001271Domain d3tnwd2: 3tnw D:309-432 [216912]
        Other proteins in same PDB: d3tnwa1, d3tnwa2, d3tnwc_
        automated match to d1vina2
        complexed with f18, na
    2. Domains for 4bco:
      1. 2001272Domain d4bcob1: 4bco B:175-308 [219433]
        Other proteins in same PDB: d4bcoa1, d4bcoa2, d4bcoc1, d4bcoc2
        automated match to d2cchb1
        complexed with sgm, so4, t6q
      2. 2001273Domain d4bcob2: 4bco B:309-432 [219434]
        Other proteins in same PDB: d4bcoa1, d4bcoa2, d4bcoc1, d4bcoc2
        automated match to d2cchb2
        complexed with sgm, so4, t6q
      3. 2001274Domain d4bcod1: 4bco D:177-308 [219436]
        Other proteins in same PDB: d4bcoa1, d4bcoa2, d4bcoc1, d4bcoc2
        automated match to d2cchb1
        complexed with sgm, so4, t6q
      4. 2001275Domain d4bcod2: 4bco D:309-432 [219437]
        Other proteins in same PDB: d4bcoa1, d4bcoa2, d4bcoc1, d4bcoc2
        automated match to d2cchb2
        complexed with sgm, so4, t6q
    3. Domains for 4bcq:
      1. 2001276Domain d4bcqb1: 4bcq B:176-308 [219439]
        Other proteins in same PDB: d4bcqa1, d4bcqa2, d4bcqb3, d4bcqc1, d4bcqc2
        automated match to d2cchb1
        complexed with tjf
      2. 2001277Domain d4bcqb2: 4bcq B:309-431 [219440]
        Other proteins in same PDB: d4bcqa1, d4bcqa2, d4bcqb3, d4bcqc1, d4bcqc2
        automated match to d2cchb2
        complexed with tjf
      3. 2001278Domain d4bcqd1: 4bcq D:176-308 [219442]
        Other proteins in same PDB: d4bcqa1, d4bcqa2, d4bcqb3, d4bcqc1, d4bcqc2
        automated match to d2cchb1
        complexed with tjf
      4. 2001279Domain d4bcqd2: 4bcq D:309-431 [219443]
        Other proteins in same PDB: d4bcqa1, d4bcqa2, d4bcqb3, d4bcqc1, d4bcqc2
        automated match to d2cchb2
        complexed with tjf
  2. 2001280Human (Homo sapiens) [TaxId:9606] [225840] (10 PDB entries)
    1. Domains for 3mia:
      1. 2001297Domain d3miab1: 3mia B:7-150 [247710]
        Other proteins in same PDB: d3miaa_
        automated match to d2pk2a2
        complexed with anp, mg, zn
      2. 2001298Domain d3miab2: 3mia B:151-261 [247711]
        Other proteins in same PDB: d3miaa_
        automated match to d2pk2a1
        complexed with anp, mg, zn
    2. Domains for 4bck:
      1. 2001285Domain d4bckb1: 4bck B:176-308 [219421]
        Other proteins in same PDB: d4bcka1, d4bcka2, d4bckc1, d4bckc2
        automated match to d2cchb1
        complexed with sgm, t3e
      2. 2001286Domain d4bckb2: 4bck B:309-432 [219422]
        Other proteins in same PDB: d4bcka1, d4bcka2, d4bckc1, d4bckc2
        automated match to d2cchb2
        complexed with sgm, t3e
      3. 2001287Domain d4bckd1: 4bck D:178-308 [219424]
        Other proteins in same PDB: d4bcka1, d4bcka2, d4bckc1, d4bckc2
        automated match to d2cchb1
        complexed with sgm, t3e
      4. 2001288Domain d4bckd2: 4bck D:309-430 [219425]
        Other proteins in same PDB: d4bcka1, d4bcka2, d4bckc1, d4bckc2
        automated match to d2cchb2
        complexed with sgm, t3e
    3. Domains for 4bcm:
      1. 2001293Domain d4bcmb1: 4bcm B:176-308 [201605]
        Other proteins in same PDB: d4bcma1, d4bcma2, d4bcmc1, d4bcmc2
        automated match to d2cchb1
        complexed with sgm, t7z
      2. 2001294Domain d4bcmb2: 4bcm B:309-432 [201606]
        Other proteins in same PDB: d4bcma1, d4bcma2, d4bcmc1, d4bcmc2
        automated match to d2cchb2
        complexed with sgm, t7z
      3. 2001295Domain d4bcmd1: 4bcm D:176-308 [201607]
        Other proteins in same PDB: d4bcma1, d4bcma2, d4bcmc1, d4bcmc2
        automated match to d2cchb1
        complexed with sgm, t7z
      4. 2001296Domain d4bcmd2: 4bcm D:309-428 [201608]
        Other proteins in same PDB: d4bcma1, d4bcma2, d4bcmc1, d4bcmc2
        automated match to d2cchb2
        complexed with sgm, t7z
    4. Domains for 4bcn:
      1. 2001281Domain d4bcnb1: 4bcn B:176-308 [219427]
        Other proteins in same PDB: d4bcna1, d4bcna2, d4bcnc1, d4bcnc2
        automated match to d2cchb1
        complexed with so4, t9n
      2. 2001282Domain d4bcnb2: 4bcn B:309-432 [219428]
        Other proteins in same PDB: d4bcna1, d4bcna2, d4bcnc1, d4bcnc2
        automated match to d2cchb2
        complexed with so4, t9n
      3. 2001283Domain d4bcnd1: 4bcn D:177-308 [219430]
        Other proteins in same PDB: d4bcna1, d4bcna2, d4bcnc1, d4bcnc2
        automated match to d2cchb1
        complexed with so4, t9n
      4. 2001284Domain d4bcnd2: 4bcn D:309-431 [219431]
        Other proteins in same PDB: d4bcna1, d4bcna2, d4bcnc1, d4bcnc2
        automated match to d2cchb2
        complexed with so4, t9n
    5. Domains for 4bcp:
      1. 2001289Domain d4bcpb1: 4bcp B:176-308 [201609]
        Other proteins in same PDB: d4bcpa1, d4bcpa2, d4bcpc1, d4bcpc2
        automated match to d2cchb1
        complexed with sgm, so4, t3c
      2. 2001290Domain d4bcpb2: 4bcp B:309-432 [201610]
        Other proteins in same PDB: d4bcpa1, d4bcpa2, d4bcpc1, d4bcpc2
        automated match to d2cchb2
        complexed with sgm, so4, t3c
      3. 2001291Domain d4bcpd1: 4bcp D:176-308 [201611]
        Other proteins in same PDB: d4bcpa1, d4bcpa2, d4bcpc1, d4bcpc2
        automated match to d2cchb1
        complexed with sgm, so4, t3c
      4. 2001292Domain d4bcpd2: 4bcp D:309-432 [201612]
        Other proteins in same PDB: d4bcpa1, d4bcpa2, d4bcpc1, d4bcpc2
        automated match to d2cchb2
        complexed with sgm, so4, t3c
    6. Domains for 4cjy:
      1. 2001299Domain d4cjya1: 4cjy A:22-157 [307119]
        Other proteins in same PDB: d4cjyc_, d4cjyd_
        automated match to d2i53a1
      2. 2001300Domain d4cjya2: 4cjy A:158-260 [307120]
        Other proteins in same PDB: d4cjyc_, d4cjyd_
        automated match to d2i53a2
      3. 2001301Domain d4cjyb1: 4cjy B:22-157 [307121]
        Other proteins in same PDB: d4cjyc_, d4cjyd_
        automated match to d2i53a1
      4. 2001302Domain d4cjyb2: 4cjy B:158-260 [307122]
        Other proteins in same PDB: d4cjyc_, d4cjyd_
        automated match to d2i53a2
    7. Domains for 4cxa:
      1. 2001307Domain d4cxab1: 4cxa B:20-157 [256728]
        Other proteins in same PDB: d4cxaa_, d4cxac_
        automated match to d2i53a1
        complexed with anp
      2. 2001308Domain d4cxab2: 4cxa B:158-265 [256729]
        Other proteins in same PDB: d4cxaa_, d4cxac_
        automated match to d2i53a2
        complexed with anp
      3. 2001309Domain d4cxad1: 4cxa D:22-157 [256730]
        Other proteins in same PDB: d4cxaa_, d4cxac_
        automated match to d2i53a1
        complexed with anp
      4. 2001310Domain d4cxad2: 4cxa D:158-262 [256731]
        Other proteins in same PDB: d4cxaa_, d4cxac_
        automated match to d2i53a2
        complexed with anp
    8. Domains for 4un0:
      1. 2001303Domain d4un0a1: 4un0 A:22-157 [263963]
        Other proteins in same PDB: d4un0c_, d4un0d_
        automated match to d2i53a1
      2. 2001304Domain d4un0a2: 4un0 A:158-260 [263964]
        Other proteins in same PDB: d4un0c_, d4un0d_
        automated match to d2i53a2
      3. 2001305Domain d4un0b1: 4un0 B:22-157 [263965]
        Other proteins in same PDB: d4un0c_, d4un0d_
        automated match to d2i53a1
      4. 2001306Domain d4un0b2: 4un0 B:158-260 [263966]
        Other proteins in same PDB: d4un0c_, d4un0d_
        automated match to d2i53a2
    9. Domains for 5acb:
      1. 2275133Domain d5acba1: 5acb A:20-157 [318434]
        Other proteins in same PDB: d5acbc_, d5acbd_
        automated match to d2i53a1
        complexed with 5i1
      2. 2275134Domain d5acba2: 5acb A:158-260 [318435]
        Other proteins in same PDB: d5acbc_, d5acbd_
        automated match to d2i53a2
        complexed with 5i1
      3. 2275151Domain d5acbb1: 5acb B:20-157 [318452]
        Other proteins in same PDB: d5acbc_, d5acbd_
        automated match to d2i53a1
        complexed with 5i1
      4. 2275152Domain d5acbb2: 5acb B:158-267 [318453]
        Other proteins in same PDB: d5acbc_, d5acbd_
        automated match to d2i53a2
        complexed with 5i1
    10. Domains for 5l2w:
      1. 2278541Domain d5l2wb1: 5l2w B:88-227 [321842]
        Other proteins in same PDB: d5l2wa1, d5l2wa2
        automated match to d1w98b2
        complexed with 1qk, gol
      2. 2278542Domain d5l2wb2: 5l2w B:228-357 [321843]
        Other proteins in same PDB: d5l2wa1, d5l2wa2
        automated match to d1w98b1
        complexed with 1qk, gol
  3. 2001311Mouse (Mus musculus) [TaxId:10090] [226547] (2 PDB entries)
    1. Domains for 4i3z:
      1. 2001312Domain d4i3zb1: 4i3z B:175-309 [202534]
        Other proteins in same PDB: d4i3za_, d4i3zc_
        automated match to d1finb1
        complexed with adp, cl, gol, mg
      2. 2001313Domain d4i3zb2: 4i3z B:310-431 [202535]
        Other proteins in same PDB: d4i3za_, d4i3zc_
        automated match to d1oiub2
        complexed with adp, cl, gol, mg
      3. 2001314Domain d4i3zd1: 4i3z D:175-309 [202536]
        Other proteins in same PDB: d4i3za_, d4i3zc_
        automated match to d1finb1
        complexed with adp, cl, gol, mg
      4. 2001315Domain d4i3zd2: 4i3z D:310-431 [202537]
        Other proteins in same PDB: d4i3za_, d4i3zc_
        automated match to d1oiub2
        complexed with adp, cl, gol, mg
    2. Domains for 4ii5:
      1. 2001316Domain d4ii5b1: 4ii5 B:175-309 [223185]
        Other proteins in same PDB: d4ii5a_, d4ii5c_
        automated match to d1finb1
        complexed with adp, gol, mg
      2. 2001317Domain d4ii5b2: 4ii5 B:310-430 [223186]
        Other proteins in same PDB: d4ii5a_, d4ii5c_
        automated match to d1oiub2
        complexed with adp, gol, mg
      3. 2001318Domain d4ii5d1: 4ii5 D:175-309 [223188]
        Other proteins in same PDB: d4ii5a_, d4ii5c_
        automated match to d1finb1
        complexed with adp, gol, mg
      4. 2001319Domain d4ii5d2: 4ii5 D:310-431 [223189]
        Other proteins in same PDB: d4ii5a_, d4ii5c_
        automated match to d1oiub2
        complexed with adp, gol, mg

More info for Protein automated matches from a.74.1.1: Cyclin

Timeline for Protein automated matches from a.74.1.1: Cyclin: