Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1531182Fold b.19: Viral protein domain [49817] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. 1531183Superfamily b.19.1: Viral protein domain [49818] (4 families) (S)
    forms homotrimers
  5. 1531708Family b.19.1.0: automated matches [227246] (1 protein)
    not a true family
  6. 1531709Protein automated matches [227017] (14 species)
    not a true protein

Species:

  1. 1531710Influenza a (virus a/turkey/italy/214845/2002 (h7n3)) [TaxId:265120] [226708] (1 PDB entry)
  2. 1531712Influenza a virus (a/chicken/potsdam/4705/1984(h2n2)) [TaxId:139280] [255660] (1 PDB entry)
  3. 1531722Influenza a virus (a/japan/305+/1957(h2n2)) [TaxId:382813] [255658] (2 PDB entries)
    1. Domains for 2wrd:
      1. 1531726Domain d2wrda1: 2wrd A:8-325 [244232]
        Other proteins in same PDB: d2wrda2, d2wrdb2, d2wrdc2
        automated match to d1ha0a1
      2. 1531727Domain d2wrdb1: 2wrd B:5-325 [244234]
        Other proteins in same PDB: d2wrda2, d2wrdb2, d2wrdc2
        automated match to d1ha0a1
      3. 1531728Domain d2wrdc1: 2wrd C:8-324 [244236]
        Other proteins in same PDB: d2wrda2, d2wrdb2, d2wrdc2
        automated match to d1ha0a1
    2. Domains for 2wre:
      1. 1531723Domain d2wrea1: 2wre A:8-325 [244238]
        Other proteins in same PDB: d2wrea2, d2wreb2, d2wrec2
        automated match to d1ha0a1
      2. 1531724Domain d2wreb1: 2wre B:5-325 [244240]
        Other proteins in same PDB: d2wrea2, d2wreb2, d2wrec2
        automated match to d1ha0a1
      3. 1531725Domain d2wrec1: 2wre C:8-324 [244242]
        Other proteins in same PDB: d2wrea2, d2wreb2, d2wrec2
        automated match to d1ha0a1
  4. 1531729Influenza a virus (a/mallard/sweden/51/2002 (h10n2)) [TaxId:757360] [256744] (2 PDB entries)
    1. Domain for 4cyv:
    2. Domain for 4cyw:
  5. 1531732Influenza a virus (a/singapore/1/1957(h2n2)) [TaxId:382781] [225764] (1 PDB entry)
  6. 1531736Influenza A virus [TaxId:1129347] [256297] (1 PDB entry)
  7. 1531739Influenza A virus [TaxId:11320] [228462] (9 PDB entries)
    1. Domains for 2wrb:
      1. 1531747Domain d2wrba1: 2wrb A:9-324 [244226]
        Other proteins in same PDB: d2wrba2, d2wrbb2, d2wrbc2
        automated match to d1ha0a1
        complexed with sia
      2. 1531748Domain d2wrbb1: 2wrb B:5-324 [244228]
        Other proteins in same PDB: d2wrba2, d2wrbb2, d2wrbc2
        automated match to d1ha0a1
        complexed with sia
      3. 1531749Domain d2wrbc1: 2wrb C:7-324 [244230]
        Other proteins in same PDB: d2wrba2, d2wrbb2, d2wrbc2
        automated match to d1ha0a1
        complexed with sia
    2. Domains for 4k3x:
      1. 1531740Domain d4k3xa_: 4k3x A: [235093]
        Other proteins in same PDB: d4k3xb_, d4k3xd_, d4k3xf_
        automated match to d4k3xe_
        complexed with nag, p4g
      2. 1531741Domain d4k3xc_: 4k3x C: [235094]
        Other proteins in same PDB: d4k3xb_, d4k3xd_, d4k3xf_
        automated match to d4k3xe_
        complexed with nag, p4g
      3. 1531742Domain d4k3xe_: 4k3x E: [228463]
        Other proteins in same PDB: d4k3xb_, d4k3xd_, d4k3xf_
        automated match to d1rvxa_
        complexed with nag, p4g
    3. Domains for 4lcx:
      1. 1531753Domain d4lcxa_: 4lcx A: [253548]
        Other proteins in same PDB: d4lcxb_, d4lcxd_, d4lcxf_
        automated match to d4bsha_
        complexed with nag
      2. 1531754Domain d4lcxc_: 4lcx C: [253550]
        Other proteins in same PDB: d4lcxb_, d4lcxd_, d4lcxf_
        automated match to d4bsha_
        complexed with nag
      3. 1531755Domain d4lcxe_: 4lcx E: [253552]
        Other proteins in same PDB: d4lcxb_, d4lcxd_, d4lcxf_
        automated match to d4bsha_
        complexed with nag
    4. Domains for 4lkg:
      1. 1531756Domain d4lkga_: 4lkg A: [235395]
        Other proteins in same PDB: d4lkgb_, d4lkgd_, d4lkgf_
        automated match to d4lkge_
        complexed with nag
      2. 1531757Domain d4lkgc_: 4lkg C: [235394]
        Other proteins in same PDB: d4lkgb_, d4lkgd_, d4lkgf_
        automated match to d4lkge_
        complexed with nag
      3. 1531758Domain d4lkge_: 4lkg E: [228796]
        Other proteins in same PDB: d4lkgb_, d4lkgd_, d4lkgf_
        automated match to d1rvxa_
        complexed with nag
    5. Domain for 4lkh:
    6. Domain for 4lki:
    7. Domain for 4lkj:
    8. Domain for 4lkk:
    9. Domains for 4mc5:
      1. 1531743Domain d4mc5a1: 4mc5 A:4-325 [228537]
        Other proteins in same PDB: d4mc5c2
        automated match to d1ha0a1
        complexed with fuc, nag
      2. 1531744Domain d4mc5b1: 4mc5 B:4-325 [235595]
        Other proteins in same PDB: d4mc5c2
        automated match to d1ha0a1
        complexed with fuc, nag
      3. 1531745Domain d4mc5c1: 4mc5 C:4-326 [240531]
        Other proteins in same PDB: d4mc5c2
        automated match to d1ha0a1
        complexed with fuc, nag
  8. 1531759Influenza a virus [TaxId:1332244] [228093] (9 PDB entries)
    1. Domains for 4ln3:
      1. 1531770Domain d4ln3a_: 4ln3 A: [235421]
        Other proteins in same PDB: d4ln3b_, d4ln3d_, d4ln3f_, d4ln3h_, d4ln3j_, d4ln3l_
        automated match to d4ln3e_
        complexed with nag
      2. 1531771Domain d4ln3c_: 4ln3 C: [235420]
        Other proteins in same PDB: d4ln3b_, d4ln3d_, d4ln3f_, d4ln3h_, d4ln3j_, d4ln3l_
        automated match to d4ln3e_
        complexed with nag
      3. 1531772Domain d4ln3e_: 4ln3 E: [228094]
        Other proteins in same PDB: d4ln3b_, d4ln3d_, d4ln3f_, d4ln3h_, d4ln3j_, d4ln3l_
        automated match to d1rvxa_
        complexed with nag
      4. 1531773Domain d4ln3g_: 4ln3 G: [235422]
        Other proteins in same PDB: d4ln3b_, d4ln3d_, d4ln3f_, d4ln3h_, d4ln3j_, d4ln3l_
        automated match to d4ln3e_
        complexed with nag
      5. 1531774Domain d4ln3i_: 4ln3 I: [235424]
        Other proteins in same PDB: d4ln3b_, d4ln3d_, d4ln3f_, d4ln3h_, d4ln3j_, d4ln3l_
        automated match to d4ln3e_
        complexed with nag
      6. 1531775Domain d4ln3k_: 4ln3 K: [235423]
        Other proteins in same PDB: d4ln3b_, d4ln3d_, d4ln3f_, d4ln3h_, d4ln3j_, d4ln3l_
        automated match to d4ln3e_
        complexed with nag
    2. Domains for 4ln8:
      1. 1531762Domain d4ln8a_: 4ln8 A: [235428]
        Other proteins in same PDB: d4ln8b_, d4ln8d_, d4ln8f_, d4ln8h_, d4ln8j_, d4ln8l_
        automated match to d4ln8e_
        complexed with ca, nag
      2. 1531763Domain d4ln8c_: 4ln8 C: [235429]
        Other proteins in same PDB: d4ln8b_, d4ln8d_, d4ln8f_, d4ln8h_, d4ln8j_, d4ln8l_
        automated match to d4ln8e_
        complexed with ca, nag
      3. 1531764Domain d4ln8e_: 4ln8 E: [228097]
        Other proteins in same PDB: d4ln8b_, d4ln8d_, d4ln8f_, d4ln8h_, d4ln8j_, d4ln8l_
        automated match to d1rvxa_
        complexed with ca, nag
      4. 1531765Domain d4ln8g_: 4ln8 G: [235431]
        Other proteins in same PDB: d4ln8b_, d4ln8d_, d4ln8f_, d4ln8h_, d4ln8j_, d4ln8l_
        automated match to d4ln8e_
        complexed with ca, nag
      5. 1531766Domain d4ln8i_: 4ln8 I: [235432]
        Other proteins in same PDB: d4ln8b_, d4ln8d_, d4ln8f_, d4ln8h_, d4ln8j_, d4ln8l_
        automated match to d4ln8e_
        complexed with ca, nag
      6. 1531767Domain d4ln8k_: 4ln8 K: [235430]
        Other proteins in same PDB: d4ln8b_, d4ln8d_, d4ln8f_, d4ln8h_, d4ln8j_, d4ln8l_
        automated match to d4ln8e_
        complexed with ca, nag
    3. Domains for 4n5j:
      1. 1531778Domain d4n5ja_: 4n5j A: [229926]
        Other proteins in same PDB: d4n5jb_, d4n5jd_
        automated match to d4bsea_
        complexed with nag
      2. 1531779Domain d4n5jc_: 4n5j C: [229929]
        Other proteins in same PDB: d4n5jb_, d4n5jd_
        automated match to d4bsea_
        complexed with nag
    4. Domains for 4n5k:
      1. 1531782Domain d4n5ka_: 4n5k A: [229928]
        Other proteins in same PDB: d4n5kb_, d4n5kd_
        automated match to d4bsea_
        complexed with nag, sia
      2. 1531783Domain d4n5kc_: 4n5k C: [229927]
        Other proteins in same PDB: d4n5kb_, d4n5kd_
        automated match to d4bsea_
        complexed with nag, sia
    5. Domains for 4n60:
      1. 1531784Domain d4n60a_: 4n60 A: [229938]
        Other proteins in same PDB: d4n60b_, d4n60d_
        automated match to d4bsea_
        complexed with nag
      2. 1531785Domain d4n60c_: 4n60 C: [229939]
        Other proteins in same PDB: d4n60b_, d4n60d_
        automated match to d4bsea_
        complexed with nag
    6. Domains for 4n61:
      1. 1531768Domain d4n61a_: 4n61 A: [229934]
        Other proteins in same PDB: d4n61b_, d4n61d_
        automated match to d4bsea_
        complexed with nag, sia
      2. 1531769Domain d4n61c_: 4n61 C: [229935]
        Other proteins in same PDB: d4n61b_, d4n61d_
        automated match to d4bsea_
        complexed with nag, sia
    7. Domains for 4n62:
      1. 1531760Domain d4n62a_: 4n62 A: [229932]
        Other proteins in same PDB: d4n62b_, d4n62d_
        automated match to d4bsea_
        complexed with nag
      2. 1531761Domain d4n62c_: 4n62 C: [229933]
        Other proteins in same PDB: d4n62b_, d4n62d_
        automated match to d4bsea_
        complexed with nag
    8. Domains for 4n63:
      1. 1531776Domain d4n63a_: 4n63 A: [229930]
        Other proteins in same PDB: d4n63b_, d4n63d_
        automated match to d4bsea_
        complexed with nag
      2. 1531777Domain d4n63c_: 4n63 C: [229931]
        Other proteins in same PDB: d4n63b_, d4n63d_
        automated match to d4bsea_
        complexed with nag
    9. Domains for 4n64:
      1. 1531780Domain d4n64a_: 4n64 A: [229936]
        Other proteins in same PDB: d4n64b_, d4n64d_
        automated match to d4bsea_
        complexed with nag
      2. 1531781Domain d4n64c_: 4n64 C: [229937]
        Other proteins in same PDB: d4n64b_, d4n64d_
        automated match to d4bsea_
        complexed with nag
  9. 1531786Influenza A virus [TaxId:490450] [255956] (1 PDB entry)
  10. 1531790Influenza virus (a/turkey/italy/214845/2002 (h7n3)) [TaxId:265120] [226710] (1 PDB entry)
  11. 1531792Influenza virus (a/turkey/italy/214845/2002(h7n3)) [TaxId:265120] [226709] (1 PDB entry)
  12. 1531794Influenza virus a/anhui/1/2013 (h7n9) [TaxId:11320] [226707] (6 PDB entries)
    1. Domain for 4bsa:
    2. Domain for 4bsb:
    3. Domain for 4bsc:
    4. Domain for 4bsd:
    5. Domain for 4bse:
    6. Domain for 4bsf:
  13. 1531801Influenza virus a/jiangxi- donghu/346/2013 (h10n8) [TaxId:11309] [256758] (1 PDB entry)
  14. 1531804Unidentified influenza virus [TaxId:11309] [225763] (4 PDB entries)
    1. Domains for 2wr0:
      1. 1531808Domain d2wr0a1: 2wr0 A:5-325 [206968]
        automated match to d1ha0a1
        complexed with nag
      2. 1531809Domain d2wr0b1: 2wr0 B:5-326 [206969]
        automated match to d1ha0a1
        complexed with nag
      3. 1531810Domain d2wr0c1: 2wr0 C:6-324 [206970]
        automated match to d1ha0a1
        complexed with nag
    2. Domains for 2wr1:
      1. 1531805Domain d2wr1a1: 2wr1 A:5-325 [206971]
        automated match to d1ha0a1
        complexed with nag
      2. 1531806Domain d2wr1b1: 2wr1 B:5-326 [206972]
        automated match to d1ha0a1
        complexed with nag
      3. 1531807Domain d2wr1c1: 2wr1 C:6-324 [206973]
        automated match to d1ha0a1
        complexed with nag
    3. Domains for 2wr5:
      1. 1531811Domain d2wr5a1: 2wr5 A:6-324 [206974]
        automated match to d1ha0a1
      2. 1531812Domain d2wr5b1: 2wr5 B:6-324 [206975]
        automated match to d1ha0a1
      3. 1531813Domain d2wr5c1: 2wr5 C:6-324 [206976]
        automated match to d1ha0a1
    4. Domains for 2wrc:
      1. 1531814Domain d2wrca1: 2wrc A:9-324 [206980]
        automated match to d1ha0a1
      2. 1531815Domain d2wrcb1: 2wrc B:5-324 [206981]
        automated match to d1ha0a1
      3. 1531816Domain d2wrcc1: 2wrc C:7-324 [206982]
        automated match to d1ha0a1

More info for Protein automated matches from b.19.1.0: automated matches

Timeline for Protein automated matches from b.19.1.0: automated matches: