Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2808719Fold b.69: 7-bladed beta-propeller [50964] (15 superfamilies)
    consists of seven 4-stranded beta-sheet motifs; meander
  4. 2809651Superfamily b.69.13: Oligoxyloglucan reducing end-specific cellobiohydrolase [110296] (2 families) (S)
    duplication: # two beta-propeller domains are swapped with the N-terminal strands; similar domain arrangment to the Actin interacting protein 1 (89378)
  5. 2809665Family b.69.13.0: automated matches [227242] (1 protein)
    not a true family
  6. 2809666Protein automated matches [227008] (11 species)
    not a true protein

Species:

  1. 2809667Acidothermus cellulolyticus [TaxId:351607] [311397] (1 PDB entry)
  2. 2809670Caldicellulosiruptor lactoaceticus [TaxId:632516] [372404] (1 PDB entry)
  3. 2809672Cellvibrio japonicus [TaxId:498211] [278979] (4 PDB entries)
    1. Domains for 5fkq:
      1. 2809679Domain d5fkqa1: 5fkq A:34-448 [278980]
        Other proteins in same PDB: d5fkqa3
        automated match to d3a0fa1
        complexed with br, edo, k
      2. 2809680Domain d5fkqa2: 5fkq A:449-765 [278981]
        Other proteins in same PDB: d5fkqa3
        automated match to d3a0fa2
        complexed with br, edo, k
      3. 2809681Domain d5fkqb1: 5fkq B:35-448 [278982]
        Other proteins in same PDB: d5fkqa3
        automated match to d3a0fa1
        complexed with br, edo, k
      4. 2809682Domain d5fkqb2: 5fkq B:449-765 [278983]
        Other proteins in same PDB: d5fkqa3
        automated match to d3a0fa2
        complexed with br, edo, k
    2. Domains for 5fkr:
      1. 2809683Domain d5fkra1: 5fkr A:35-448 [310549]
        automated match to d5fkta1
        complexed with br, edo, k
      2. 2809684Domain d5fkra2: 5fkr A:449-765 [310550]
        automated match to d5fkta2
        complexed with br, edo, k
    3. Domains for 5fks:
      1. 2809677Domain d5fksa1: 5fks A:35-448 [310551]
        automated match to d5fkta1
        complexed with br, edo, k
      2. 2809678Domain d5fksa2: 5fks A:449-765 [310552]
        automated match to d5fkta2
        complexed with br, edo, k
    4. Domains for 5fkt:
      1. 2809673Domain d5fkta1: 5fkt A:35-448 [278984]
        Other proteins in same PDB: d5fktb3
        automated match to d3a0fa1
        complexed with br, edo, k
      2. 2809674Domain d5fkta2: 5fkt A:449-765 [278985]
        Other proteins in same PDB: d5fktb3
        automated match to d3a0fa2
        complexed with br, edo, k
      3. 2809675Domain d5fktb1: 5fkt B:34-448 [278986]
        Other proteins in same PDB: d5fktb3
        automated match to d3a0fa1
        complexed with br, edo, k
      4. 2809676Domain d5fktb2: 5fkt B:449-765 [278987]
        Other proteins in same PDB: d5fktb3
        automated match to d3a0fa2
        complexed with br, edo, k
  4. 2809685Clostridium thermocellum [TaxId:1515] [311203] (2 PDB entries)
    1. Domains for 2cn2:
      1. 2809686Domain d2cn2a1: 2cn2 A:33-445 [303679]
        automated match to d5fkta1
        complexed with cd
      2. 2809687Domain d2cn2a2: 2cn2 A:446-760 [303680]
        automated match to d5fkta2
        complexed with cd
      3. 2809688Domain d2cn2b1: 2cn2 B:33-445 [303681]
        automated match to d5fkta1
        complexed with cd
      4. 2809689Domain d2cn2b2: 2cn2 B:446-760 [303682]
        automated match to d5fkta2
        complexed with cd
      5. 2809690Domain d2cn2c1: 2cn2 C:33-445 [303683]
        automated match to d5fkta1
        complexed with cd
      6. 2809691Domain d2cn2c2: 2cn2 C:446-760 [303684]
        automated match to d5fkta2
        complexed with cd
      7. 2809692Domain d2cn2d1: 2cn2 D:33-445 [303685]
        automated match to d5fkta1
        complexed with cd
      8. 2809693Domain d2cn2d2: 2cn2 D:446-760 [303686]
        automated match to d5fkta2
        complexed with cd
    2. Domains for 2cn3:
      1. 2809694Domain d2cn3a1: 2cn3 A:33-445 [303687]
        automated match to d5fkqa1
        complexed with ca
      2. 2809695Domain d2cn3a2: 2cn3 A:446-760 [303688]
        automated match to d5fkqa2
        complexed with ca
      3. 2809696Domain d2cn3b1: 2cn3 B:33-445 [303689]
        automated match to d5fkqa1
        complexed with ca
      4. 2809697Domain d2cn3b2: 2cn3 B:446-760 [303690]
        automated match to d5fkqa2
        complexed with ca
  5. 2809698Geotrichum sp. [TaxId:203496] [225698] (1 PDB entry)
  6. 2809701Niastella koreensis [TaxId:700598] [372387] (1 PDB entry)
  7. 2809704Paenibacillus graminis [TaxId:189425] [372382] (1 PDB entry)
  8. 2809707Paenibacillus odorifer [TaxId:189426] [362770] (3 PDB entries)
    1. Domains for 6mgj:
      1. 2809718Domain d6mgja1: 6mgj A:35-441 [362777]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna1
        complexed with cl, gol, mg, pe3, po4
      2. 2809719Domain d6mgja2: 6mgj A:442-779 [362778]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna2
        complexed with cl, gol, mg, pe3, po4
      3. 2809720Domain d6mgjb1: 6mgj B:35-441 [363024]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna1
        complexed with cl, gol, mg, pe3, po4
      4. 2809721Domain d6mgjb2: 6mgj B:442-779 [363025]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna2
        complexed with cl, gol, mg, pe3, po4
      5. 2809722Domain d6mgjc1: 6mgj C:35-441 [363031]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna1
        complexed with cl, gol, mg, pe3, po4
      6. 2809723Domain d6mgjc2: 6mgj C:442-779 [363032]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna2
        complexed with cl, gol, mg, pe3, po4
      7. 2809724Domain d6mgjd1: 6mgj D:35-441 [362787]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna1
        complexed with cl, gol, mg, pe3, po4
      8. 2809725Domain d6mgjd2: 6mgj D:442-779 [362788]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna2
        complexed with cl, gol, mg, pe3, po4
      9. 2809726Domain d6mgje1: 6mgj E:35-441 [362780]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna1
        complexed with cl, gol, mg, pe3, po4
      10. 2809727Domain d6mgje2: 6mgj E:442-779 [362781]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna2
        complexed with cl, gol, mg, pe3, po4
      11. 2809728Domain d6mgjf1: 6mgj F:35-441 [362771]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna1
        complexed with cl, gol, mg, pe3, po4
      12. 2809729Domain d6mgjf2: 6mgj F:442-779 [362772]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna2
        complexed with cl, gol, mg, pe3, po4
      13. 2809730Domain d6mgjg1: 6mgj G:35-441 [362812]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna1
        complexed with cl, gol, mg, pe3, po4
      14. 2809731Domain d6mgjg2: 6mgj G:442-779 [362813]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna2
        complexed with cl, gol, mg, pe3, po4
      15. 2809732Domain d6mgjh1: 6mgj H:35-441 [362993]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna1
        complexed with cl, gol, mg, pe3, po4
      16. 2809733Domain d6mgjh2: 6mgj H:442-779 [362994]
        Other proteins in same PDB: d6mgja3, d6mgjb3, d6mgjc3, d6mgjd3, d6mgje3, d6mgjf3, d6mgjg3, d6mgjh3
        automated match to d4lgna2
        complexed with cl, gol, mg, pe3, po4
    2. Domains for 6mgk:
      1. 2809710Domain d6mgka1: 6mgk A:1-407 [362808]
        Other proteins in same PDB: d6mgka3, d6mgkb3, d6mgkc3, d6mgkd3
        automated match to d4lgna1
        complexed with cl, gol, pe3
      2. 2809711Domain d6mgka2: 6mgk A:408-745 [362809]
        Other proteins in same PDB: d6mgka3, d6mgkb3, d6mgkc3, d6mgkd3
        automated match to d4lgna2
        complexed with cl, gol, pe3
      3. 2809712Domain d6mgkb1: 6mgk B:1-407 [362818]
        Other proteins in same PDB: d6mgka3, d6mgkb3, d6mgkc3, d6mgkd3
        automated match to d4lgna1
        complexed with cl, gol, pe3
      4. 2809713Domain d6mgkb2: 6mgk B:408-745 [362819]
        Other proteins in same PDB: d6mgka3, d6mgkb3, d6mgkc3, d6mgkd3
        automated match to d4lgna2
        complexed with cl, gol, pe3
      5. 2809714Domain d6mgkc1: 6mgk C:1-407 [362774]
        Other proteins in same PDB: d6mgka3, d6mgkb3, d6mgkc3, d6mgkd3
        automated match to d4lgna1
        complexed with cl, gol, pe3
      6. 2809715Domain d6mgkc2: 6mgk C:408-745 [362775]
        Other proteins in same PDB: d6mgka3, d6mgkb3, d6mgkc3, d6mgkd3
        automated match to d4lgna2
        complexed with cl, gol, pe3
      7. 2809716Domain d6mgkd1: 6mgk D:1-407 [362854]
        Other proteins in same PDB: d6mgka3, d6mgkb3, d6mgkc3, d6mgkd3
        automated match to d4lgna1
        complexed with cl, gol, pe3
      8. 2809717Domain d6mgkd2: 6mgk D:408-745 [362855]
        Other proteins in same PDB: d6mgka3, d6mgkb3, d6mgkc3, d6mgkd3
        automated match to d4lgna2
        complexed with cl, gol, pe3
    3. Domains for 6mgl:
      1. 2809708Domain d6mgla1: 6mgl A:1-407 [362783]
        Other proteins in same PDB: d6mgla3
        automated match to d4lgna1
        complexed with cl, gol, mg, pe3; mutant
      2. 2809709Domain d6mgla2: 6mgl A:408-745 [362784]
        Other proteins in same PDB: d6mgla3
        automated match to d4lgna2
        complexed with cl, gol, mg, pe3; mutant
  9. 2809734Streptomyces rapamycinicus [TaxId:1343740] [372390] (1 PDB entry)
  10. 2809739Streptomyces sp. [TaxId:862751] [318010] (1 PDB entry)
  11. 2809744Xanthomonas campestris [TaxId:190485] [405380] (1 PDB entry)

More info for Protein automated matches from b.69.13.0: automated matches

Timeline for Protein automated matches from b.69.13.0: automated matches: