![]() | Class d: Alpha and beta proteins (a+b) [53931] (396 folds) |
![]() | Fold d.131: DNA clamp [55978] (1 superfamily) contains two helices and two beta sheets duplication: fold has internal pseudo two-fold symmetry |
![]() | Superfamily d.131.1: DNA clamp [55979] (3 families) ![]() |
![]() | Family d.131.1.2: DNA polymerase processivity factor [55983] (5 proteins) duplication: consists of two domains of this fold |
![]() | Protein automated matches [227006] (3 species) not a true protein |
![]() | Archaeoglobus fulgidus [TaxId:2234] [256015] (1 PDB entry) |
![]() | Domain d3p83a1: 3p83 A:1-122 [248430] Other proteins in same PDB: d3p83d1, d3p83d2, d3p83e1, d3p83e2, d3p83f_ automated match to d1rwza1 protein/DNA complex; protein/RNA complex |
![]() | Domain d3p83a2: 3p83 A:123-244 [248431] Other proteins in same PDB: d3p83d1, d3p83d2, d3p83e1, d3p83e2, d3p83f_ automated match to d1rwza2 protein/DNA complex; protein/RNA complex |
![]() | Domain d3p83b1: 3p83 B:1-122 [248432] Other proteins in same PDB: d3p83d1, d3p83d2, d3p83e1, d3p83e2, d3p83f_ automated match to d1rwza1 protein/DNA complex; protein/RNA complex |
![]() | Domain d3p83b2: 3p83 B:123-244 [248433] Other proteins in same PDB: d3p83d1, d3p83d2, d3p83e1, d3p83e2, d3p83f_ automated match to d1rwza2 protein/DNA complex; protein/RNA complex |
![]() | Domain d3p83c1: 3p83 C:1-122 [248434] Other proteins in same PDB: d3p83d1, d3p83d2, d3p83e1, d3p83e2, d3p83f_ automated match to d1rwza1 protein/DNA complex; protein/RNA complex |
![]() | Domain d3p83c2: 3p83 C:123-243 [248435] Other proteins in same PDB: d3p83d1, d3p83d2, d3p83e1, d3p83e2, d3p83f_ automated match to d1rwza2 protein/DNA complex; protein/RNA complex |
![]() | Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [232312] (4 PDB entries) |
![]() | Domain d3gpna1: 3gpn A:1-126 [232313] automated match to d1plqa1 mutant |
![]() | Domain d3gpna2: 3gpn A:127-253 [232314] automated match to d1plqa2 mutant |
![]() | Domain d3l0wa1: 3l0w A:1-126 [232749] automated match to d1plqa1 |
![]() | Domain d3l10a1: 3l10 A:1-126 [232750] automated match to d1plqa1 |
![]() | Domain d3l10a2: 3l10 A:127-163 [232795] automated match to d1plqa2 fragment; missing more than one-third of the common structure and/or sequence |
![]() | Domain d3pgeb1: 3pge B:1-126 [233236] Other proteins in same PDB: d3pgeb2 automated match to d1plqa1 |
![]() | Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [233826] (5 PDB entries) |
![]() | Domain d3v60b1: 3v60 B:1-126 [233827] Other proteins in same PDB: d3v60a_ automated match to d1plqa1 protein/DNA complex; complexed with so4 |
![]() | Domain d3v60b2: 3v60 B:127-256 [233828] Other proteins in same PDB: d3v60a_ automated match to d1plqa2 protein/DNA complex; complexed with so4 |
![]() | Domain d3v61b1: 3v61 B:1-126 [233829] Other proteins in same PDB: d3v61a_ automated match to d1plqa1 protein/DNA complex; complexed with ba, neq |
![]() | Domain d3v61b2: 3v61 B:127-254 [233830] Other proteins in same PDB: d3v61a_ automated match to d1plqa2 protein/DNA complex; complexed with ba, neq |
![]() | Domain d3v62b1: 3v62 B:1-126 [239888] Other proteins in same PDB: d3v62a_, d3v62d_ automated match to d3v60b1 protein/DNA complex; complexed with neq, so4 |
![]() | Domain d3v62b2: 3v62 B:127-255 [239889] Other proteins in same PDB: d3v62a_, d3v62d_ automated match to d3v60b2 protein/DNA complex; complexed with neq, so4 |
![]() | Domain d3v62e1: 3v62 E:1-126 [239890] Other proteins in same PDB: d3v62a_, d3v62d_ automated match to d3v60b1 protein/DNA complex; complexed with neq, so4 |
![]() | Domain d3v62e2: 3v62 E:127-255 [239891] Other proteins in same PDB: d3v62a_, d3v62d_ automated match to d3v60b2 protein/DNA complex; complexed with neq, so4 |
![]() | Domain d4l60a1: 4l60 A:1-126 [253529] automated match to d1plqa1 mutant |
![]() | Domain d4l60a2: 4l60 A:127-256 [253530] automated match to d1plqa2 mutant |
![]() | Domain d4l6pa1: 4l6p A:1-126 [259790] Other proteins in same PDB: d4l6pa3, d4l6pb3, d4l6pc3 automated match to d1plqa1 complexed with gol; mutant |
![]() | Domain d4l6pa2: 4l6p A:127-254 [259791] Other proteins in same PDB: d4l6pa3, d4l6pb3, d4l6pc3 automated match to d1plqa2 complexed with gol; mutant |
![]() | Domain d4l6pb1: 4l6p B:1-126 [260676] Other proteins in same PDB: d4l6pa3, d4l6pb3, d4l6pc3 automated match to d1plqa1 complexed with gol; mutant |
![]() | Domain d4l6pb2: 4l6p B:127-253 [260677] Other proteins in same PDB: d4l6pa3, d4l6pb3, d4l6pc3 automated match to d1plqa2 complexed with gol; mutant |
![]() | Domain d4l6pc1: 4l6p C:1-125 [262901] Other proteins in same PDB: d4l6pa3, d4l6pb3, d4l6pc3 automated match to d1plqa1 complexed with gol; mutant |
![]() | Domain d4l6pc2: 4l6p C:130-255 [262902] Other proteins in same PDB: d4l6pa3, d4l6pb3, d4l6pc3 automated match to d1plqa2 complexed with gol; mutant |
Timeline for Protein automated matches from d.131.1.2: DNA polymerase processivity factor: