Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2090218Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2090219Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2093723Family c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain [51883] (12 protein domains)
    extra N-terminal helix displaces the C-terminal helix (following strand 6) from its usual position creating a family nicotineamide-binding site
  6. 2094007Protein automated matches [227005] (3 species)
    not a true protein

Species:

  1. 2094008Cow (Bos taurus) [TaxId:9913] [225674] (3 PDB entries)
    1. Domains for 3etd:
      1. 2094009Domain d3etda2: 3etd A:209-501 [209640]
        Other proteins in same PDB: d3etda1, d3etdb1, d3etdc1, d3etdd1, d3etde1, d3etdf1
        automated match to d1nr7a1
        complexed with b1t, glu, gtp, ndp
      2. 2094010Domain d3etdb2: 3etd B:209-501 [209642]
        Other proteins in same PDB: d3etda1, d3etdb1, d3etdc1, d3etdd1, d3etde1, d3etdf1
        automated match to d1nr7a1
        complexed with b1t, glu, gtp, ndp
      3. 2094011Domain d3etdc2: 3etd C:209-501 [209644]
        Other proteins in same PDB: d3etda1, d3etdb1, d3etdc1, d3etdd1, d3etde1, d3etdf1
        automated match to d1nr7a1
        complexed with b1t, glu, gtp, ndp
      4. 2094012Domain d3etdd2: 3etd D:209-501 [209646]
        Other proteins in same PDB: d3etda1, d3etdb1, d3etdc1, d3etdd1, d3etde1, d3etdf1
        automated match to d1nr7a1
        complexed with b1t, glu, gtp, ndp
      5. 2094013Domain d3etde2: 3etd E:209-501 [209648]
        Other proteins in same PDB: d3etda1, d3etdb1, d3etdc1, d3etdd1, d3etde1, d3etdf1
        automated match to d1nr7a1
        complexed with b1t, glu, gtp, ndp
      6. 2094014Domain d3etdf2: 3etd F:209-501 [209650]
        Other proteins in same PDB: d3etda1, d3etdb1, d3etdc1, d3etdd1, d3etde1, d3etdf1
        automated match to d1nr7a1
        complexed with b1t, glu, gtp, ndp
    2. Domains for 3ete:
      1. 2094021Domain d3etea2: 3ete A:209-498 [245907]
        Other proteins in same PDB: d3etea1, d3eteb1, d3etec1, d3eted1, d3etee1, d3etef1
        automated match to d3etda2
        complexed with glu, gtp, h3p, ndp
      2. 2094022Domain d3eteb2: 3ete B:209-498 [245909]
        Other proteins in same PDB: d3etea1, d3eteb1, d3etec1, d3eted1, d3etee1, d3etef1
        automated match to d3etda2
        complexed with glu, gtp, h3p, ndp
      3. 2094023Domain d3etec2: 3ete C:209-498 [245911]
        Other proteins in same PDB: d3etea1, d3eteb1, d3etec1, d3eted1, d3etee1, d3etef1
        automated match to d3etda2
        complexed with glu, gtp, h3p, ndp
      4. 2094024Domain d3eted2: 3ete D:209-498 [245913]
        Other proteins in same PDB: d3etea1, d3eteb1, d3etec1, d3eted1, d3etee1, d3etef1
        automated match to d3etda2
        complexed with glu, gtp, h3p, ndp
      5. 2094025Domain d3etee2: 3ete E:209-498 [245915]
        Other proteins in same PDB: d3etea1, d3eteb1, d3etec1, d3eted1, d3etee1, d3etef1
        automated match to d3etda2
        complexed with glu, gtp, h3p, ndp
      6. 2094026Domain d3etef2: 3ete F:209-498 [245917]
        Other proteins in same PDB: d3etea1, d3eteb1, d3etec1, d3eted1, d3etee1, d3etef1
        automated match to d3etda2
        complexed with glu, gtp, h3p, ndp
    3. Domains for 3etg:
      1. 2094015Domain d3etga2: 3etg A:209-501 [209652]
        Other proteins in same PDB: d3etga1, d3etgb1, d3etgc1, d3etgd1, d3etge1, d3etgf1
        automated match to d1nr7a1
        complexed with glu, gtp, gwd, ndp
      2. 2094016Domain d3etgb2: 3etg B:209-501 [209654]
        Other proteins in same PDB: d3etga1, d3etgb1, d3etgc1, d3etgd1, d3etge1, d3etgf1
        automated match to d1nr7a1
        complexed with glu, gtp, gwd, ndp
      3. 2094017Domain d3etgc2: 3etg C:209-501 [209656]
        Other proteins in same PDB: d3etga1, d3etgb1, d3etgc1, d3etgd1, d3etge1, d3etgf1
        automated match to d1nr7a1
        complexed with glu, gtp, gwd, ndp
      4. 2094018Domain d3etgd2: 3etg D:209-501 [209658]
        Other proteins in same PDB: d3etga1, d3etgb1, d3etgc1, d3etgd1, d3etge1, d3etgf1
        automated match to d1nr7a1
        complexed with glu, gtp, gwd, ndp
      5. 2094019Domain d3etge2: 3etg E:209-501 [209660]
        Other proteins in same PDB: d3etga1, d3etgb1, d3etgc1, d3etgd1, d3etge1, d3etgf1
        automated match to d1nr7a1
        complexed with glu, gtp, gwd, ndp
      6. 2094020Domain d3etgf2: 3etg F:209-501 [209662]
        Other proteins in same PDB: d3etga1, d3etgb1, d3etgc1, d3etgd1, d3etge1, d3etgf1
        automated match to d1nr7a1
        complexed with glu, gtp, gwd, ndp
  2. 2094027Salmonella enterica [TaxId:90371] [226190] (1 PDB entry)
  3. Thermotoga maritima [TaxId:2336] [255206] (1 PDB entry)

More info for Protein automated matches from c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain

Timeline for Protein automated matches from c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain: