Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2105127Fold c.25: Ferredoxin reductase-like, C-terminal NADP-linked domain [52342] (1 superfamily)
    3 layers, a/b/a; parallel beta-sheet of 5 strands, order 32145
  4. 2105128Superfamily c.25.1: Ferredoxin reductase-like, C-terminal NADP-linked domain [52343] (6 families) (S)
    binds NADP differently than classical Rossmann-fold
    N-terminal FAD-linked domain contains (6,10) barrel
  5. 2105129Family c.25.1.1: Reductases [52344] (5 protein domains)
  6. 2105215Protein automated matches [226995] (7 species)
    not a true protein

Species:

  1. 2105216Anabaena pcc7119 [TaxId:1168] [254931] (1 PDB entry)
  2. 2105218Anabaena sp. [TaxId:1167] [229046] (3 PDB entries)
    1. Domain for 2bsa:
    2. Domain for 4bpr:
    3. Domain for 4c43:
  3. 2105222Anabaena sp. [TaxId:1168] [254932] (3 PDB entries)
    1. Domain for 1w34:
    2. Domains for 1w87:
      1. 2105225Domain d1w87a2: 1w87 A:142-303 [120713]
        Other proteins in same PDB: d1w87a1, d1w87b1
        automated match to d1ewya2
        complexed with fad, nap; mutant
      2. 2105226Domain d1w87b2: 1w87 B:142-303 [120715]
        Other proteins in same PDB: d1w87a1, d1w87b1
        automated match to d1ewya2
        complexed with fad, nap; mutant
    3. Domain for 2bmw:
  4. 2105227Escherichia coli [TaxId:562] [226085] (1 PDB entry)
  5. 2105230Nostoc sp. [TaxId:1168] [229177] (3 PDB entries)
    1. Domain for 3zbt:
    2. Domain for 3zbu:
    3. Domains for 3zc3:
      1. 2105233Domain d3zc3a2: 3zc3 A:142-303 [229180]
        Other proteins in same PDB: d3zc3a1, d3zc3b1
        automated match to d1ewya2
        complexed with fad, gol, nap; mutant
      2. 2105234Domain d3zc3b2: 3zc3 B:142-303 [235908]
        Other proteins in same PDB: d3zc3a1, d3zc3b1
        automated match to d3zc3a2
        complexed with fad, gol, nap; mutant
  6. 2105235Pea (Pisum sativum) [TaxId:3888] [226086] (3 PDB entries)
    1. Domains for 2xnc:
      1. 2105236Domain d2xnca2: 2xnc A:140-299 [207280]
        Other proteins in same PDB: d2xnca1, d2xnca3, d2xncb1, d2xncb3
        automated match to d1frna2
        complexed with fad, so4
      2. 2105237Domain d2xncb2: 2xnc B:140-299 [207282]
        Other proteins in same PDB: d2xnca1, d2xnca3, d2xncb1, d2xncb3
        automated match to d1frna2
        complexed with fad, so4
    2. Domains for 4af6:
      1. 2105240Domain d4af6a2: 4af6 A:149-308 [218821]
        Other proteins in same PDB: d4af6a1, d4af6b1
        automated match to d1frna2
        complexed with fad; mutant
      2. 2105241Domain d4af6b2: 4af6 B:149-308 [218823]
        Other proteins in same PDB: d4af6a1, d4af6b1
        automated match to d1frna2
        complexed with fad; mutant
    3. Domains for 4af7:
      1. 2105238Domain d4af7a2: 4af7 A:149-308 [218825]
        Other proteins in same PDB: d4af7a1, d4af7b1
        automated match to d1frna2
        complexed with fad; mutant
      2. 2105239Domain d4af7b2: 4af7 B:149-308 [218827]
        Other proteins in same PDB: d4af7a1, d4af7b1
        automated match to d1frna2
        complexed with fad; mutant
  7. 2105242Salmonella typhimurium [TaxId:99287] [225605] (1 PDB entry)

More info for Protein automated matches from c.25.1.1: Reductases

Timeline for Protein automated matches from c.25.1.1: Reductases: