SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class a: All alpha proteins [46456] (289 folds)
Fold a.5: RuvA C-terminal domain-like [46928] (9 superfamilies)
3 helices; bundle, right-handed twist
Superfamily a.5.3: CRAL/TRIO N-terminal domain [46938] (2 families)
Family a.5.3.0: automated matches [227224] (1 protein)
not a true family
Protein automated matches [226965] (3 species)
not a true protein

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [225408] (5 PDB entries)
1. Domain for 3b74:
  - Domain d3b74a1: 3b74 A:4-94 [208545]
    Other proteins in same PDB: d3b74a2
    automated match to d1auaa1
    complexed with pee
2. Domain for 3b7n:
  - Domain d3b7na1: 3b7n A:4-94 [208549]
    Other proteins in same PDB: d3b7na2
    automated match to d1auaa1
    complexed with act, b7n, po4
3. Domains for 3b7q:
  1. Domain d3b7qa1: 3b7q A:4-94 [208551]
    Other proteins in same PDB: d3b7qa2, d3b7qb2
    automated match to d1auaa1
    complexed with 6pl, gol, po4
  2. Domain d3b7qb1: 3b7q B:3-94 [208553]
    Other proteins in same PDB: d3b7qa2, d3b7qb2
    automated match to d1auaa1
    complexed with 6pl, gol, po4
4. Domain for 3b7z:
  - Domain d3b7za1: 3b7z A:4-94 [208558]
    Other proteins in same PDB: d3b7za2
    automated match to d1auaa1
    complexed with 6pl, b7n
5. Domain for 3q8g:
  - Domain d3q8ga1: 3q8g A:4-94 [215107]
    Other proteins in same PDB: d3q8ga2
    automated match to d1auaa1
    complexed with gol, pee
Human (Homo sapiens) [TaxId:9606] [258515] (4 PDB entries)
1. Domains for 4omj:
  1. Domain d4omja1: 4omj A:1-75 [271395]
    Other proteins in same PDB: d4omja2, d4omjb2
    automated match to d1olma1
    complexed with 2tx, cl, so4
  2. Domain d4omjb1: 4omj B:1-75 [271400]
    Other proteins in same PDB: d4omja2, d4omjb2
    automated match to d1olma1
    complexed with 2tx, cl, so4
2. Domains for 4omk:
  1. Domain d4omka1: 4omk A:1-75 [271397]
    Other proteins in same PDB: d4omka2, d4omkb2
    automated match to d1olma1
    complexed with cl, ipa, so4, sql
  2. Domain d4omkb1: 4omk B:1-75 [271401]
    Other proteins in same PDB: d4omka2, d4omkb2
    automated match to d1olma1
    complexed with cl, ipa, so4, sql
3. Domains for 4tlg:
  1. Domain d4tlga1: 4tlg A:3-75 [258516]
    Other proteins in same PDB: d4tlga2, d4tlga3, d4tlgb2, d4tlgb3
    automated match to d1olma1
    complexed with 11a, edo
  2. Domain d4tlgb1: 4tlg B:7-75 [258517]
    Other proteins in same PDB: d4tlga2, d4tlga3, d4tlgb2, d4tlgb3
    automated match to d1olma1
    complexed with 11a, edo
4. Domain for 4uyb:
  - Domain d4uyba1: 4uyb A:1-75 [260101]
    Other proteins in same PDB: d4uyba2, d4uyba3, d4uyba4
    automated match to d1olma1
    complexed with edo, unl
Mouse (Mus musculus) [TaxId:10090] [233924] (2 PDB entries)
1. Domains for 3w67:
  1. Domain d3w67a1: 3w67 A:25-90 [233925]
    Other proteins in same PDB: d3w67a2, d3w67b2, d3w67c2, d3w67d2
    automated match to d1oiza1
    complexed with 3pt, viv
  2. Domain d3w67b1: 3w67 B:23-90 [239899]
    Other proteins in same PDB: d3w67a2, d3w67b2, d3w67c2, d3w67d2
    automated match to d3w68b1
    complexed with 3pt, viv
  3. Domain d3w67c1: 3w67 C:26-90 [239901]
    Other proteins in same PDB: d3w67a2, d3w67b2, d3w67c2, d3w67d2
    automated match to d3w67a1
    complexed with 3pt, viv
  4. Domain d3w67d1: 3w67 D:25-90 [239903]
    Other proteins in same PDB: d3w67a2, d3w67b2, d3w67c2, d3w67d2
    automated match to d3w67a1
    complexed with 3pt, viv
2. Domains for 3w68:
  1. Domain d3w68a1: 3w68 A:25-90 [236499]
    Other proteins in same PDB: d3w68a2, d3w68b2, d3w68c2, d3w68d2
    automated match to d3w67a1
    complexed with 4pt, pbu, po4, viv
  2. Domain d3w68b1: 3w68 B:23-90 [236494]
    Other proteins in same PDB: d3w68a2, d3w68b2, d3w68c2, d3w68d2
    automated match to d3w67a1
    complexed with 4pt, pbu, po4, viv
  3. Domain d3w68c1: 3w68 C:26-90 [236492]
    Other proteins in same PDB: d3w68a2, d3w68b2, d3w68c2, d3w68d2
    automated match to d3w67a1
    complexed with 4pt, pbu, po4, viv
  4. Domain d3w68d1: 3w68 D:25-90 [236503]
    Other proteins in same PDB: d3w68a2, d3w68b2, d3w68c2, d3w68d2
    automated match to d3w67a1
    complexed with 4pt, pbu, po4, viv

More info for Protein automated matches from a.5.3.0: automated matches

Timeline for Protein automated matches from a.5.3.0: automated matches:

Protein automated matches from a.5.3.0: automated matches first appeared in SCOPe 2.03
Protein automated matches from a.5.3.0: automated matches appears in SCOPe 2.05
Protein automated matches from a.5.3.0: automated matches appears in SCOPe 2.07
Protein automated matches from a.5.3.0: automated matches appears in the current release, SCOPe 2.08