Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1449807Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)
  3. 1451317Fold e.6: Acyl-CoA dehydrogenase NM domain-like [56644] (1 superfamily)
    2 domains: (1) all-alpha: 5 helices; (2) contains an open beta-sheet barrel: n*=5, S*=8; complex topology
  4. 1451318Superfamily e.6.1: Acyl-CoA dehydrogenase NM domain-like [56645] (3 families) (S)
    flavoprotein: binds FAD; constituent families differ in the numbers of C-terminal domains (four-helical bundles)
  5. 1451319Family e.6.1.1: Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains [56646] (10 proteins)
  6. 1451418Protein automated matches [226961] (2 species)
    not a true protein

Species:

  1. 1451419Fusarium oxysporum [TaxId:5507] [231929] (4 PDB entries)
    1. Domains for 3d9d:
      1. 1451420Domain d3d9da1: 3d9d A:2-260 [231930]
        Other proteins in same PDB: d3d9da2, d3d9db2, d3d9dc2, d3d9dd2
        automated match to d2c0ua2
        complexed with fad, gol, n6c; mutant
      2. 1451421Domain d3d9db1: 3d9d B:2-260 [231934]
        Other proteins in same PDB: d3d9da2, d3d9db2, d3d9dc2, d3d9dd2
        automated match to d2c0ua2
        complexed with fad, gol, n6c; mutant
      3. 1451422Domain d3d9dc1: 3d9d C:2-260 [231936]
        Other proteins in same PDB: d3d9da2, d3d9db2, d3d9dc2, d3d9dd2
        automated match to d2c0ua2
        complexed with fad, gol, n6c; mutant
      4. 1451423Domain d3d9dd1: 3d9d D:2-260 [231938]
        Other proteins in same PDB: d3d9da2, d3d9db2, d3d9dc2, d3d9dd2
        automated match to d2c0ua2
        complexed with fad, gol, n6c; mutant
    2. Domains for 3d9e:
      1. 1451428Domain d3d9ea1: 3d9e A:2-260 [231940]
        Other proteins in same PDB: d3d9ea2, d3d9eb2, d3d9ec2, d3d9ed2
        automated match to d2c0ua2
        complexed with fad, gol, n8c; mutant
      2. 1451429Domain d3d9eb1: 3d9e B:2-260 [231941]
        Other proteins in same PDB: d3d9ea2, d3d9eb2, d3d9ec2, d3d9ed2
        automated match to d2c0ua2
        complexed with fad, gol, n8c; mutant
      3. 1451430Domain d3d9ec1: 3d9e C:2-260 [231942]
        Other proteins in same PDB: d3d9ea2, d3d9eb2, d3d9ec2, d3d9ed2
        automated match to d2c0ua2
        complexed with fad, gol, n8c; mutant
      4. 1451431Domain d3d9ed1: 3d9e D:2-260 [231943]
        Other proteins in same PDB: d3d9ea2, d3d9eb2, d3d9ec2, d3d9ed2
        automated match to d2c0ua2
        complexed with fad, gol, n8c; mutant
    3. Domains for 3d9f:
      1. 1451432Domain d3d9fa1: 3d9f A:2-260 [231946]
        Other proteins in same PDB: d3d9fa2, d3d9fb2, d3d9fc2, d3d9fd2
        automated match to d2c0ua2
        complexed with fad, gol, n6c; mutant
      2. 1451433Domain d3d9fb1: 3d9f B:2-260 [231951]
        Other proteins in same PDB: d3d9fa2, d3d9fb2, d3d9fc2, d3d9fd2
        automated match to d2c0ua2
        complexed with fad, gol, n6c; mutant
      3. 1451434Domain d3d9fc1: 3d9f C:2-260 [231952]
        Other proteins in same PDB: d3d9fa2, d3d9fb2, d3d9fc2, d3d9fd2
        automated match to d2c0ua2
        complexed with fad, gol, n6c; mutant
      4. 1451435Domain d3d9fd1: 3d9f D:2-260 [231955]
        Other proteins in same PDB: d3d9fa2, d3d9fb2, d3d9fc2, d3d9fd2
        automated match to d2c0ua2
        complexed with fad, gol, n6c; mutant
    4. Domains for 3d9g:
      1. 1451424Domain d3d9ga1: 3d9g A:2-260 [231956]
        Other proteins in same PDB: d3d9ga2, d3d9gb2, d3d9gc2, d3d9gd2
        automated match to d2c0ua2
        complexed with cnx, fad, gol
      2. 1451425Domain d3d9gb1: 3d9g B:2-260 [231957]
        Other proteins in same PDB: d3d9ga2, d3d9gb2, d3d9gc2, d3d9gd2
        automated match to d2c0ua2
        complexed with cnx, fad, gol
      3. 1451426Domain d3d9gc1: 3d9g C:2-260 [231959]
        Other proteins in same PDB: d3d9ga2, d3d9gb2, d3d9gc2, d3d9gd2
        automated match to d2c0ua2
      4. 1451427Domain d3d9gd1: 3d9g D:2-260 [231963]
        Other proteins in same PDB: d3d9ga2, d3d9gb2, d3d9gc2, d3d9gd2
        automated match to d2c0ua2
  2. 1451436Human (Homo sapiens) [TaxId:9606] [225392] (1 PDB entry)

More info for Protein automated matches from e.6.1.1: Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains

Timeline for Protein automated matches from e.6.1.1: Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains:

  • Protein automated matches from e.6.1.1: Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains is new in SCOPe 2.03-stable
  • Protein automated matches from e.6.1.1: Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains appears in SCOPe 2.04
  • Protein automated matches from e.6.1.1: Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains appears in the current release, SCOPe 2.07