Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2332578Fold a.116: GTPase activation domain, GAP [48349] (1 superfamily)
    multihelical
  4. 2332579Superfamily a.116.1: GTPase activation domain, GAP [48350] (3 families) (S)
  5. 2332617Family a.116.1.0: automated matches [227202] (1 protein)
    not a true family
  6. 2332618Protein automated matches [226932] (3 species)
    not a true protein

Species:

  1. 2332619Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [275444] (2 PDB entries)
    1. Domain for 4u3k:
    2. Domain for 5my3:
  2. 2332621Human (Homo sapiens) [TaxId:9606] [225230] (9 PDB entries)
    1. Domain for 2ee4:
    2. Domain for 2ee5:
    3. Domain for 2osa:
    4. Domains for 3byi:
      1. 2332625Domain d3byia1: 3byi A:262-471 [208745]
        Other proteins in same PDB: d3byia2, d3byib2
        automated match to d1grnb_
      2. 2332626Domain d3byib1: 3byi B:262-471 [208746]
        Other proteins in same PDB: d3byia2, d3byib2
        automated match to d1grnb_
      3. 2332627Domain d3byic_: 3byi C: [208747]
        Other proteins in same PDB: d3byia2, d3byib2
        automated match to d1grnb_
      4. 2332628Domain d3byid_: 3byi D: [208748]
        Other proteins in same PDB: d3byia2, d3byib2
        automated match to d1grnb_
    5. Domains for 3fk2:
      1. 2332636Domain d3fk2a_: 3fk2 A: [246161]
        automated match to d3byic_
        complexed with unx
      2. 2332637Domain d3fk2b_: 3fk2 B: [246162]
        automated match to d3byic_
        complexed with unx
      3. 2332638Domain d3fk2c_: 3fk2 C: [246163]
        automated match to d3byic_
        complexed with unx
      4. 2332639Domain d3fk2d_: 3fk2 D: [246164]
        automated match to d3byic_
        complexed with unx
    6. Domains for 3iug:
      1. 2332623Domain d3iuga1: 3iug A:367-568 [232627]
        Other proteins in same PDB: d3iuga2
        automated match to d2osaa_
        complexed with unx
      2. 2332624Domain d3iugb_: 3iug B: [232628]
        Other proteins in same PDB: d3iuga2
        automated match to d2osaa_
        complexed with unx
    7. Domain for 3msx:
    8. Domains for 5c5s:
      1. 2332630Domain d5c5sa1: 5c5s A:110-318 [310327]
        Other proteins in same PDB: d5c5sa2
        automated match to d1rgpa_
      2. 2332631Domain d5c5sb_: 5c5s B: [310329]
        Other proteins in same PDB: d5c5sa2
        automated match to d3msxb_
      3. 2332632Domain d5c5sc_: 5c5s C: [310330]
        Other proteins in same PDB: d5c5sa2
        automated match to d3msxb_
      4. 2332633Domain d5c5sd_: 5c5s D: [310331]
        Other proteins in same PDB: d5c5sa2
        automated match to d1rgpa_
    9. Domains for 5hpy:
      1. 2332634Domain d5hpya_: 5hpy A: [319536]
        Other proteins in same PDB: d5hpyb_, d5hpyf_
        automated match to d5c5sc_
        complexed with gdp, mg, mgf
      2. 2332635Domain d5hpyd_: 5hpy D: [319602]
        Other proteins in same PDB: d5hpyb_, d5hpyf_
        automated match to d5c5sc_
        complexed with gdp, mg, mgf
  3. 2332642Norway rat (Rattus norvegicus) [TaxId:10116] [321372] (1 PDB entry)

More info for Protein automated matches from a.116.1.0: automated matches

Timeline for Protein automated matches from a.116.1.0: automated matches: