Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1336837Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1353895Fold c.14: ClpP/crotonase [52095] (1 superfamily)
    core: 4 turns of (beta-beta-alpha)n superhelix
  4. 1353896Superfamily c.14.1: ClpP/crotonase [52096] (5 families) (S)
  5. 1354508Family c.14.1.4: Biotin dependent carboxylase carboxyltransferase domain [89572] (7 proteins)
    Pfam PF01039
    the active site is formed by two different homologous subunits or domains of this fold
  6. 1354670Protein automated matches [226926] (3 species)
    not a true protein

Species:

  1. 1354671Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [225864] (4 PDB entries)
    1. Domains for 3h0j:
      1. 1354690Domain d3h0ja1: 3h0j A:1482-1814 [210758]
        automated match to d1uyrb1
        complexed with b36
      2. 1354691Domain d3h0ja2: 3h0j A:1815-2195 [210759]
        automated match to d1od2a2
        complexed with b36
      3. 1354692Domain d3h0jb1: 3h0j B:1482-1814 [210760]
        automated match to d1uyrb1
        complexed with b36
      4. 1354693Domain d3h0jb2: 3h0j B:1815-2189 [210761]
        automated match to d1od2a2
        complexed with b36
      5. 1354694Domain d3h0jc1: 3h0j C:1492-1814 [210762]
        automated match to d1uyrb1
        complexed with b36
      6. 1354695Domain d3h0jc2: 3h0j C:1815-2189 [210763]
        automated match to d1od2a2
        complexed with b36
    2. Domains for 3h0q:
      1. 1354678Domain d3h0qa1: 3h0q A:1482-1814 [210764]
        automated match to d1uyrb1
        complexed with b37
      2. 1354679Domain d3h0qa2: 3h0q A:1815-2195 [210765]
        automated match to d1od2a2
        complexed with b37
      3. 1354680Domain d3h0qb1: 3h0q B:1482-1814 [210766]
        automated match to d1uyrb1
        complexed with b37
      4. 1354681Domain d3h0qb2: 3h0q B:1815-2189 [210767]
        automated match to d1od2a2
        complexed with b37
      5. 1354682Domain d3h0qc1: 3h0q C:1492-1814 [210768]
        automated match to d1uyrb1
        complexed with b37
      6. 1354683Domain d3h0qc2: 3h0q C:1815-2189 [210769]
        automated match to d1od2a2
        complexed with b37
    3. Domains for 3h0s:
      1. 1354672Domain d3h0sa1: 3h0s A:1480-1814 [210770]
        automated match to d1uyrb1
        complexed with b38, so4
      2. 1354673Domain d3h0sa2: 3h0s A:1815-2195 [210771]
        automated match to d1od2a2
        complexed with b38, so4
      3. 1354674Domain d3h0sb1: 3h0s B:1480-1814 [210772]
        automated match to d1uyrb1
        complexed with b38, so4
      4. 1354675Domain d3h0sb2: 3h0s B:1815-2189 [210773]
        automated match to d1od2a2
        complexed with b38, so4
      5. 1354676Domain d3h0sc1: 3h0s C:1492-1814 [210774]
        automated match to d1uyrb1
        complexed with b38, so4
      6. 1354677Domain d3h0sc2: 3h0s C:1815-2192 [210775]
        automated match to d1od2a2
        complexed with b38, so4
    4. Domains for 3pgq:
      1. 1354684Domain d3pgqa1: 3pgq A:1480-1814 [214770]
        automated match to d1uyrb1
        complexed with gy3
      2. 1354685Domain d3pgqa2: 3pgq A:1815-2195 [214771]
        automated match to d1od2a2
        complexed with gy3
      3. 1354686Domain d3pgqb1: 3pgq B:1480-1814 [214772]
        automated match to d1uyrb1
        complexed with gy3
      4. 1354687Domain d3pgqb2: 3pgq B:1815-2192 [214773]
        automated match to d1od2a2
        complexed with gy3
      5. 1354688Domain d3pgqc1: 3pgq C:1491-1814 [214774]
        automated match to d1uyrb1
        complexed with gy3
      6. 1354689Domain d3pgqc2: 3pgq C:1815-2193 [214775]
        automated match to d1od2a2
        complexed with gy3
  2. 1354696Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [226234] (4 PDB entries)
    1. Domains for 3tv5:
      1. 1354703Domain d3tv5a1: 3tv5 A:1480-1814 [217040]
        automated match to d1uyrb1
        complexed with rcp
      2. 1354704Domain d3tv5a2: 3tv5 A:1815-2195 [217041]
        automated match to d1od2a2
        complexed with rcp
      3. 1354705Domain d3tv5b1: 3tv5 B:1480-1814 [217042]
        automated match to d1uyrb1
        complexed with rcp
      4. 1354706Domain d3tv5b2: 3tv5 B:1815-2189 [217043]
        automated match to d1od2a2
        complexed with rcp
      5. 1354707Domain d3tv5c1: 3tv5 C:1492-1814 [217044]
        automated match to d1uyrb1
        complexed with rcp
      6. 1354708Domain d3tv5c2: 3tv5 C:1815-2192 [217045]
        automated match to d1od2a2
        complexed with rcp
    2. Domains for 3tvu:
      1. 1354697Domain d3tvua1: 3tvu A:1480-1814 [217047]
        automated match to d1uyrb1
        complexed with b37
      2. 1354698Domain d3tvua2: 3tvu A:1815-2195 [217048]
        automated match to d1od2a2
        complexed with b37
      3. 1354699Domain d3tvub1: 3tvu B:1480-1814 [217049]
        automated match to d1uyrb1
        complexed with b37
      4. 1354700Domain d3tvub2: 3tvu B:1815-2189 [217050]
        automated match to d1od2a2
        complexed with b37
      5. 1354701Domain d3tvuc1: 3tvu C:1495-1814 [217051]
        automated match to d1uyrb1
        complexed with b37
      6. 1354702Domain d3tvuc2: 3tvu C:1815-2192 [217052]
        automated match to d1od2a2
        complexed with b37
    3. Domains for 3tvw:
      1. 1354709Domain d3tvwa1: 3tvw A:1480-1814 [217053]
        automated match to d1uyrb1
        complexed with 07h
      2. 1354710Domain d3tvwa2: 3tvw A:1815-2195 [217054]
        automated match to d1od2a2
        complexed with 07h
      3. 1354711Domain d3tvwb1: 3tvw B:1480-1814 [217055]
        automated match to d1uyrb1
        complexed with 07h
      4. 1354712Domain d3tvwb2: 3tvw B:1815-2189 [217056]
        automated match to d1od2a2
        complexed with 07h
      5. 1354713Domain d3tvwc1: 3tvw C:1495-1814 [217057]
        automated match to d1uyrb1
        complexed with 07h
      6. 1354714Domain d3tvwc2: 3tvw C:1815-2192 [217058]
        automated match to d1od2a2
        complexed with 07h
    4. Domains for 3tz3:
      1. 1354715Domain d3tz3a1: 3tz3 A:1480-1814 [217106]
        automated match to d1uyrb1
        complexed with b36
      2. 1354716Domain d3tz3a2: 3tz3 A:1815-2193 [217107]
        automated match to d1od2a2
        complexed with b36
      3. 1354717Domain d3tz3b1: 3tz3 B:1480-1814 [217108]
        automated match to d1uyrb1
        complexed with b36
      4. 1354718Domain d3tz3b2: 3tz3 B:1815-2191 [217109]
        automated match to d1od2a2
        complexed with b36
      5. 1354719Domain d3tz3c1: 3tz3 C:1494-1814 [217110]
        automated match to d1uyrb1
        complexed with b36
      6. 1354720Domain d3tz3c2: 3tz3 C:1815-2191 [217111]
        automated match to d1od2a2
        complexed with b36
  3. Mycobacterium tuberculosis [TaxId:83332] [230567] (1 PDB entry)

More info for Protein automated matches from c.14.1.4: Biotin dependent carboxylase carboxyltransferase domain

Timeline for Protein automated matches from c.14.1.4: Biotin dependent carboxylase carboxyltransferase domain:

  • Protein automated matches from c.14.1.4: Biotin dependent carboxylase carboxyltransferase domain is new in SCOPe 2.03-stable
  • Protein automated matches from c.14.1.4: Biotin dependent carboxylase carboxyltransferase domain appears in SCOPe 2.04
  • Protein automated matches from c.14.1.4: Biotin dependent carboxylase carboxyltransferase domain appears in the current release, SCOPe 2.08