Species:

1. Castor bean (Ricinus communis) [TaxId:3988] [256065] (1 PDB entry)

   • Domains for 3rtj:

     1. Domain d3rtjb1: 3rtj B:1-135 [239703] Other proteins in same PDB: d3rtja_ automated match to d1hwob1 protein/RNA complex

     2. Domain d3rtjb2: 3rtj B:136-262 [239704] Other proteins in same PDB: d3rtja_ automated match to d1hwob2 protein/RNA complex

2. Clostridium botulinum [TaxId:1491] [254975] (8 PDB entries)

   1. Domains for 1ybi:

      1. Domain d1ybia1: 1ybi A:10-151 [241001] automated match to d2e4ma1

      2. Domain d1ybia2: 1ybi A:152-293 [241002] automated match to d2e4ma2

      3. Domain d1ybib1: 1ybi B:10-151 [241003] automated match to d2e4ma1

      4. Domain d1ybib2: 1ybi B:152-293 [241004] automated match to d2e4ma2

   2. Domains for 4lo0:

      1. Domain d4lo0a1: 4lo0 A:9-151 [253656] automated match to d2e4ma1

      2. Domain d4lo0a2: 4lo0 A:152-294 [253657] automated match to d2e4ma2

      3. Domain d4lo0b1: 4lo0 B:10-151 [253658] automated match to d2e4ma1

      4. Domain d4lo0b2: 4lo0 B:152-294 [253659] automated match to d2e4ma2

   3. Domains for 4lo1:

      1. Domain d4lo1a1: 4lo1 A:9-151 [253660] automated match to d2e4ma1 complexed with gal

      2. Domain d4lo1a2: 4lo1 A:152-294 [253661] automated match to d2e4ma2 complexed with gal

      3. Domain d4lo1b1: 4lo1 B:10-151 [253662] automated match to d2e4ma1 complexed with gal

      4. Domain d4lo1b2: 4lo1 B:152-294 [253663] automated match to d2e4ma2 complexed with gal

   4. Domains for 4lo2:

      1. Domain d4lo2a1: 4lo2 A:9-151 [253664] automated match to d2e4ma1

      2. Domain d4lo2a2: 4lo2 A:152-294 [253665] automated match to d2e4ma2

      3. Domain d4lo2b1: 4lo2 B:9-151 [253666] automated match to d2e4ma1

      4. Domain d4lo2b2: 4lo2 B:152-294 [253667] automated match to d2e4ma2

   5. Domains for 4lo3:

      1. Domain d4lo3a1: 4lo3 A:9-151 [253668] automated match to d2e4ma1

      2. Domain d4lo3a2: 4lo3 A:152-294 [253669] automated match to d2e4ma2

      3. Domain d4lo3b1: 4lo3 B:10-151 [253670] automated match to d2e4ma1

      4. Domain d4lo3b2: 4lo3 B:152-294 [253671] automated match to d2e4ma2

   6. Domains for 4qd2:

      1. Domain d4qd2d2: 4qd2 D:152-294 [257656] Other proteins in same PDB: d4qd2e1, d4qd2e2, d4qd2j1, d4qd2j2 automated match to d4lo0a2 complexed with ca

      2. Domain d4qd2h1: 4qd2 H:9-151 [258345] Other proteins in same PDB: d4qd2e1, d4qd2e2, d4qd2j1, d4qd2j2 automated match to d4lo0a1 complexed with ca

      3. Domain d4qd2h2: 4qd2 H:152-294 [258346] Other proteins in same PDB: d4qd2e1, d4qd2e2, d4qd2j1, d4qd2j2 automated match to d4lo0a2 complexed with ca

      4. Domain d4qd2i1: 4qd2 I:9-151 [263674] Other proteins in same PDB: d4qd2e1, d4qd2e2, d4qd2j1, d4qd2j2 automated match to d4lo0a1 complexed with ca

      5. Domain d4qd2i2: 4qd2 I:152-294 [263675] Other proteins in same PDB: d4qd2e1, d4qd2e2, d4qd2j1, d4qd2j2 automated match to d4lo0a2 complexed with ca

   7. Domains for 5bp5:

      1. Domain d5bp5a1: 5bp5 A:9-151 [276498] automated match to d4lo0a1 complexed with ipt

      2. Domain d5bp5a2: 5bp5 A:152-294 [276500] automated match to d4lo0a2 complexed with ipt

      3. Domain d5bp5b1: 5bp5 B:10-151 [276497] automated match to d4lo0a1 complexed with ipt

      4. Domain d5bp5b2: 5bp5 B:152-294 [276499] automated match to d4lo0a2 complexed with ipt

   8. Domains for 5bqu:

      1. Domain d5bqua1: 5bqu A:10-151 [278009] automated match to d4lo0a1 complexed with fru, gal

      2. Domain d5bqua2: 5bqu A:152-294 [278010] automated match to d4lo0a2 complexed with fru, gal

      3. Domain d5bqub1: 5bqu B:10-151 [278012] automated match to d4lo0a1 complexed with fru, gal

      4. Domain d5bqub2: 5bqu B:152-294 [278014] automated match to d4lo0a2 complexed with fru, gal

3. Clostridium botulinum [TaxId:441771] [257654] (1 PDB entry)

   • Domains for 4qd2:

     1. Domain d4qd2c1: 4qd2 C:9-151 [257657] Other proteins in same PDB: d4qd2e1, d4qd2e2, d4qd2j1, d4qd2j2 automated match to d4lo0a1 complexed with ca

     2. Domain d4qd2d1: 4qd2 D:9-151 [257655] Other proteins in same PDB: d4qd2e1, d4qd2e2, d4qd2j1, d4qd2j2 automated match to d4lo0a1 complexed with ca

4. Clostridium botulinum [TaxId:498213] [257331] (1 PDB entry)

   • Domains for 4ouj:

     1. Domain d4ouja1: 4ouj A:11-153 [257332] automated match to d4lo0a1 complexed with lbt

     2. Domain d4ouja2: 4ouj A:154-294 [257333] automated match to d4lo0a2 complexed with lbt

     3. Domain d4oujb1: 4ouj B:11-153 [263346] automated match to d4lo0a1 complexed with lbt

     4. Domain d4oujb2: 4ouj B:154-294 [263347] automated match to d4lo0a2 complexed with lbt

5. Polyporus squamosus [TaxId:5640] [233243] (1 PDB entry)

   • Domains for 3phz:

     1. Domain d3phza1: 3phz A:2-148 [233244] Other proteins in same PDB: d3phza2, d3phzb2 automated match to d2ihoa1 complexed with sia

     2. Domain d3phzb1: 3phz B:2-148 [233245] Other proteins in same PDB: d3phza2, d3phzb2 automated match to d2ihoa1 complexed with sia

6. Sambucus nigra [TaxId:4202] [225559] (8 PDB entries)

   1. Domains for 3c9z:

      1. Domain d3c9za1: 3c9z A:1-128 [208821] automated match to d1onkb1 complexed with act, nag, so4

      2. Domain d3c9za2: 3c9z A:129-257 [208822] automated match to d1onkb2 complexed with act, nag, so4

   2. Domains for 3ca0:

      1. Domain d3ca0a1: 3ca0 A:1-128 [208823] automated match to d1onkb1 complexed with act, so4

      2. Domain d3ca0a2: 3ca0 A:129-257 [208824] automated match to d1onkb2 complexed with act, so4

   3. Domains for 3ca1:

      1. Domain d3ca1a1: 3ca1 A:1-128 [208825] automated match to d1onkb1 complexed with act, gla, nag, so4

      2. Domain d3ca1a2: 3ca1 A:129-257 [208826] automated match to d1onkb2 complexed with act, gla, nag, so4

   4. Domains for 3ca3:

      1. Domain d3ca3a1: 3ca3 A:1-128 [208827] automated match to d1onkb1 complexed with a2g, act, nag, nga, so4

      2. Domain d3ca3a2: 3ca3 A:129-257 [208828] automated match to d1onkb2 complexed with a2g, act, nag, nga, so4

   5. Domains for 3ca4:

      1. Domain d3ca4a1: 3ca4 A:1-128 [208829] automated match to d1onkb1 complexed with act, lat, nag, so4

      2. Domain d3ca4a2: 3ca4 A:129-257 [208830] automated match to d1onkb2 complexed with act, lat, nag, so4

   6. Domains for 3ca5:

      1. Domain d3ca5a1: 3ca5 A:1-128 [208831] automated match to d1onkb1 complexed with act, amg, nag, so4

      2. Domain d3ca5a2: 3ca5 A:129-257 [208832] automated match to d1onkb2 complexed with act, amg, nag, so4

   7. Domains for 3ca6:

      1. Domain d3ca6a1: 3ca6 A:1-128 [208833] automated match to d1onkb1 complexed with a2g, act, nag, ser, so4

      2. Domain d3ca6a2: 3ca6 A:129-257 [208834] automated match to d1onkb2 complexed with a2g, act, nag, ser, so4

   8. Domains for 3cah:

      1. Domain d3caha1: 3cah A:1-128 [208842] automated match to d1onkb1 complexed with act, fca, nag, so4

      2. Domain d3caha2: 3cah A:129-257 [208843] automated match to d1onkb2 complexed with act, fca, nag, so4

7. Streptomyces olivaceoviridis [TaxId:1921] [225151] (5 PDB entries)

   1. Domains for 2d1z:

      1. Domain d2d1za2: 2d1z A:322-436 [203862] Other proteins in same PDB: d2d1za1, d2d1zb1 automated match to d1xyfa1 complexed with gol, so4; mutant

      2. Domain d2d1zb2: 2d1z B:822-936 [203864] Other proteins in same PDB: d2d1za1, d2d1zb1 automated match to d1xyfa1 complexed with gol, so4; mutant

   2. Domains for 2d20:

      1. Domain d2d20a2: 2d20 A:322-436 [203866] Other proteins in same PDB: d2d20a1, d2d20b1 automated match to d1xyfa1 complexed with gol, npo; mutant

      2. Domain d2d20b2: 2d20 B:822-936 [203868] Other proteins in same PDB: d2d20a1, d2d20b1 automated match to d1xyfa1 complexed with gol, npo; mutant

   3. Domains for 2d22:

      1. Domain d2d22a2: 2d22 A:322-436 [203870] Other proteins in same PDB: d2d22a1, d2d22b1 automated match to d1xyfa1 complexed with gol, so4; mutant

      2. Domain d2d22b2: 2d22 B:822-936 [203872] Other proteins in same PDB: d2d22a1, d2d22b1 automated match to d1xyfa1 complexed with gol, so4; mutant

   4. Domains for 2d23:

      1. Domain d2d23a2: 2d23 A:322-436 [203874] Other proteins in same PDB: d2d23a1, d2d23b1 automated match to d1xyfa1 complexed with gol; mutant

      2. Domain d2d23b2: 2d23 B:822-936 [203876] Other proteins in same PDB: d2d23a1, d2d23b1 automated match to d1xyfa1 complexed with gol; mutant

   5. Domains for 2d24:

      1. Domain d2d24a2: 2d24 A:322-436 [203878] Other proteins in same PDB: d2d24a1, d2d24b1 automated match to d1xyfa1 complexed with gol, so4; mutant

      2. Domain d2d24b2: 2d24 B:822-936 [203880] Other proteins in same PDB: d2d24a1, d2d24b1 automated match to d1xyfa1 complexed with gol, so4; mutant

8. Trichosanthes anguina [TaxId:50544] [226741] (1 PDB entry)

   • Domains for 4hr6:

     1. Domain d4hr6c1: 4hr6 C:1-133 [222718] automated match to d1rzob1 complexed with amg

     2. Domain d4hr6c2: 4hr6 C:134-264 [222719] automated match to d1rzob2 complexed with amg

More info for Protein automated matches from b.42.2.0: automated matches

Timeline for Protein automated matches from b.42.2.0: automated matches:

• Protein automated matches from b.42.2.0: automated matches first appeared in SCOPe 2.03
  
• Protein automated matches from b.42.2.0: automated matches appears in SCOPe 2.04
  
• Protein automated matches from b.42.2.0: automated matches appears in SCOPe 2.06
  
• Protein automated matches from b.42.2.0: automated matches appears in the current release, SCOPe 2.08