SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.30: PreATP-grasp domain [52439] (1 superfamily)
3 layers: a/b/a; parallel or mixed beta-sheet of 4 to 6 strands
possible rudiment form of Rossmann-fold domain
Superfamily c.30.1: PreATP-grasp domain [52440] (10 families)
precedes the ATP-grasp domain common to all superfamily members, can contain a substrate-binding function
Family c.30.1.0: automated matches [227183] (1 protein)
not a true family
Protein automated matches [226903] (35 species)
not a true protein

Species:

Acinetobacter baumannii [TaxId:405416] [321244] (2 PDB entries)
1. Domains for 5d8d:
  1. Domain d5d8da1: 5d8d A:2-98 [321245]
    Other proteins in same PDB: d5d8da2, d5d8db2, d5d8dc2, d5d8dd2, d5d8de2, d5d8df2
    automated match to d4egjd1
  2. Domain d5d8db1: 5d8d B:2-98 [321663]
    Other proteins in same PDB: d5d8da2, d5d8db2, d5d8dc2, d5d8dd2, d5d8de2, d5d8df2
    automated match to d4egjd1
  3. Domain d5d8dc1: 5d8d C:2-98 [321297]
    Other proteins in same PDB: d5d8da2, d5d8db2, d5d8dc2, d5d8dd2, d5d8de2, d5d8df2
    automated match to d4egjd1
  4. Domain d5d8dd1: 5d8d D:2-98 [321248]
    Other proteins in same PDB: d5d8da2, d5d8db2, d5d8dc2, d5d8dd2, d5d8de2, d5d8df2
    automated match to d4egjd1
  5. Domain d5d8de1: 5d8d E:2-98 [321676]
    Other proteins in same PDB: d5d8da2, d5d8db2, d5d8dc2, d5d8dd2, d5d8de2, d5d8df2
    automated match to d4egjd1
  6. Domain d5d8df1: 5d8d F:2-98 [321282]
    Other proteins in same PDB: d5d8da2, d5d8db2, d5d8dc2, d5d8dd2, d5d8de2, d5d8df2
    automated match to d4egjd1
2. Domains for 5dmx:
  1. Domain d5dmxa1: 5dmx A:1-98 [321675]
    Other proteins in same PDB: d5dmxd2
    automated match to d4egjd1
  2. Domain d5dmxb1: 5dmx B:2-98 [321370]
    Other proteins in same PDB: d5dmxd2
    automated match to d4egjd1
  3. Domain d5dmxc1: 5dmx C:1-98 [321665]
    Other proteins in same PDB: d5dmxd2
    automated match to d4egjd1
  4. Domain d5dmxd1: 5dmx D:4-98 [321340]
    Other proteins in same PDB: d5dmxd2
    automated match to d4egjd1
  5. Domain d5dmxe1: 5dmx E:4-98 [321254]
    Other proteins in same PDB: d5dmxd2
    automated match to d4egjd1
  6. Domain d5dmxf1: 5dmx F:1-98 [321348]
    Other proteins in same PDB: d5dmxd2
    automated match to d4egjd1
Aquifex aeolicus [TaxId:63363] [255712] (2 PDB entries)
1. Domains for 2yw2:
  1. Domain d2yw2a1: 2yw2 A:1-101 [244836]
    Other proteins in same PDB: d2yw2a2, d2yw2a3, d2yw2b2, d2yw2b3
    automated match to d1gsoa2
    complexed with atp, po4
  2. Domain d2yw2b1: 2yw2 B:1-101 [244839]
    Other proteins in same PDB: d2yw2a2, d2yw2a3, d2yw2b2, d2yw2b3
    automated match to d1gsoa2
    complexed with atp, po4
2. Domains for 2yya:
  1. Domain d2yyaa1: 2yya A:1-101 [244882]
    Other proteins in same PDB: d2yyaa2, d2yyaa3, d2yyab2, d2yyab3
    automated match to d1gsoa2
  2. Domain d2yyab1: 2yya B:1-101 [244885]
    Other proteins in same PDB: d2yyaa2, d2yyaa3, d2yyab2, d2yyab3
    automated match to d1gsoa2

Bos taurus [TaxId:9913] [321364] (1 PDB entry)

Domain for 5j2u:

Domain d5j2uf1: 5j2u F:1-76 [321365]
Other proteins in same PDB: d5j2ua1, d5j2ua2, d5j2ub1, d5j2ub2, d5j2uc1, d5j2uc2, d5j2ud1, d5j2ud2, d5j2ue_, d5j2uf2
automated match to d3tiia1
complexed with 6do, acp, ca, gdp, gtp, mg

Burkholderia ambifaria [TaxId:398577] [226365] (1 PDB entry)
- Domains for 4eg0:
  1. Domain d4eg0a1: 4eg0 A:4-102 [220466]
    Other proteins in same PDB: d4eg0a2, d4eg0b2
    automated match to d1e4ea1
    complexed with edo
  2. Domain d4eg0b1: 4eg0 B:4-102 [220468]
    Other proteins in same PDB: d4eg0a2, d4eg0b2
    automated match to d1e4ea1
    complexed with edo
Burkholderia pseudomallei [TaxId:320372] [226351] (1 PDB entry)
- Domains for 4egq:
  1. Domain d4egqa1: 4egq A:4-102 [220526]
    Other proteins in same PDB: d4egqa2, d4egqb2, d4egqc2, d4egqd2
    automated match to d1e4ea1
  2. Domain d4egqb1: 4egq B:5-102 [220528]
    Other proteins in same PDB: d4egqa2, d4egqb2, d4egqc2, d4egqd2
    automated match to d1e4ea1
  3. Domain d4egqc1: 4egq C:4-102 [220530]
    Other proteins in same PDB: d4egqa2, d4egqb2, d4egqc2, d4egqd2
    automated match to d1e4ea1
  4. Domain d4egqd1: 4egq D:4-102 [220532]
    Other proteins in same PDB: d4egqa2, d4egqb2, d4egqc2, d4egqd2
    automated match to d1e4ea1
Burkholderia xenovorans [TaxId:266265] [226415] (1 PDB entry)
- Domains for 4egj:
  1. Domain d4egja1: 4egj A:4-102 [220506]
    Other proteins in same PDB: d4egja2, d4egjb2, d4egjc2, d4egjd2
    automated match to d1e4ea1
  2. Domain d4egjb1: 4egj B:4-102 [220508]
    Other proteins in same PDB: d4egja2, d4egjb2, d4egjc2, d4egjd2
    automated match to d1e4ea1
  3. Domain d4egjc1: 4egj C:4-102 [220510]
    Other proteins in same PDB: d4egja2, d4egjb2, d4egjc2, d4egjd2
    automated match to d1e4ea1
  4. Domain d4egjd1: 4egj D:3-102 [220512]
    Other proteins in same PDB: d4egja2, d4egjb2, d4egjc2, d4egjd2
    automated match to d1e4ea1
Campylobacter jejuni [TaxId:192222] [256006] (2 PDB entries)
1. Domains for 3ouu:
  1. Domain d3ouua1: 3ouu A:1-116 [248340]
    Other proteins in same PDB: d3ouua2, d3ouua3, d3ouua4, d3ouub2, d3ouub3
    automated match to d1ulza2
    complexed with anp, ca, cac, fmt, gol
  2. Domain d3ouub1: 3ouu B:1-116 [248343]
    Other proteins in same PDB: d3ouua2, d3ouua3, d3ouua4, d3ouub2, d3ouub3
    automated match to d1ulza2
    complexed with anp, ca, cac, fmt, gol
2. Domains for 3ouz:
  1. Domain d3ouza1: 3ouz A:1-116 [248346]
    Other proteins in same PDB: d3ouza2, d3ouza3, d3ouza4, d3ouzb2, d3ouzb3
    automated match to d1ulza2
    complexed with adp, fmt, gol, mg, mlt, srt, tla
  2. Domain d3ouzb1: 3ouz B:1-116 [248349]
    Other proteins in same PDB: d3ouza2, d3ouza3, d3ouza4, d3ouzb2, d3ouzb3
    automated match to d1ulza2
    complexed with adp, fmt, gol, mg, mlt, srt, tla

Chicken (Gallus gallus) [TaxId:9031] [311405] (4 PDB entries)

Domain for 4o4h:

Domain d4o4hf1: 4o4h F:1-76 [299937]
Other proteins in same PDB: d4o4ha1, d4o4ha2, d4o4hb1, d4o4hb2, d4o4hc1, d4o4hc2, d4o4hd1, d4o4hd2, d4o4he_, d4o4hf2, d4o4hf3
automated match to d3tiia1
complexed with acp, ca, gdp, gol, gtp, llm, mg

Domain for 4o4i:

Domain d4o4if1: 4o4i F:1-76 [299940]
Other proteins in same PDB: d4o4ia1, d4o4ia2, d4o4ib1, d4o4ib2, d4o4ic1, d4o4ic2, d4o4id1, d4o4id2, d4o4ie_, d4o4if2
automated match to d3tiia1
complexed with acp, ca, ep, gdp, gtp, llm, mes, mg

Domain for 4o4j:

Domain d4o4jf1: 4o4j F:1-76 [299942]
Other proteins in same PDB: d4o4ja1, d4o4ja2, d4o4jb1, d4o4jb2, d4o4jc1, d4o4jc2, d4o4jd1, d4o4jd2, d4o4je_
automated match to d3tiia1
complexed with acp, ca, gdp, gol, gtp, mg, pou

Domain for 4o4l:

Domain d4o4lf1: 4o4l F:1-76 [299943]
Other proteins in same PDB: d4o4la1, d4o4la2, d4o4lb1, d4o4lb2, d4o4lc1, d4o4lc2, d4o4ld1, d4o4ld2, d4o4le_, d4o4lf2
automated match to d3tiia1
complexed with ca, ep, gdp, gtp, mes, mg, pou

Coxiella burnetii [TaxId:227377] [226218] (1 PDB entry)
- Domains for 3tqt:
  1. Domain d3tqta1: 3tqt A:2-139 [216990]
    Other proteins in same PDB: d3tqta2, d3tqtb2
    automated match to d1ehib1
  2. Domain d3tqtb1: 3tqt B:4-139 [216992]
    Other proteins in same PDB: d3tqta2, d3tqtb2
    automated match to d1ehib1
Ehrlichia chaffeensis [TaxId:205920] [255934] (1 PDB entry)
- Domain for 3lp8:
  - Domain d3lp8a1: 3lp8 A:1-101 [247483]
    Other proteins in same PDB: d3lp8a2, d3lp8a3, d3lp8a4
    automated match to d1gsoa2
    complexed with po4, unx
Enterococcus faecalis [TaxId:1351] [226473] (1 PDB entry)
- Domains for 4fu0:
  1. Domain d4fu0a1: 4fu0 A:2-138 [221519]
    Other proteins in same PDB: d4fu0a2, d4fu0b2
    automated match to d1e4ea1
    complexed with adp, so4
  2. Domain d4fu0b1: 4fu0 B:2-138 [221521]
    Other proteins in same PDB: d4fu0a2, d4fu0b2
    automated match to d1e4ea1
    complexed with adp, so4
Escherichia coli K-12 [TaxId:83333] [255841] (2 PDB entries)
1. Domains for 3g8c:
  1. Domain d3g8ca1: 3g8c A:1-114 [246260]
    Other proteins in same PDB: d3g8ca2, d3g8ca3, d3g8cb2, d3g8cb3
    automated match to d2w70a1
    complexed with adp, bct, btn, mg
  2. Domain d3g8cb1: 3g8c B:1-114 [246263]
    Other proteins in same PDB: d3g8ca2, d3g8ca3, d3g8cb2, d3g8cb3
    automated match to d2w70a1
    complexed with adp, bct, btn, mg
2. Domains for 3g8d:
  1. Domain d3g8da1: 3g8d A:1-114 [246266]
    Other proteins in same PDB: d3g8da2, d3g8db2, d3g8db3
    automated match to d2w70a1
    complexed with adp, mg, so4; mutant
  2. Domain d3g8db1: 3g8d B:1-114 [246268]
    Other proteins in same PDB: d3g8da2, d3g8db2, d3g8db3
    automated match to d2w70a1
    complexed with adp, mg, so4; mutant
Escherichia coli [TaxId:83333] [268126] (3 PDB entries)
1. Domains for 4c5a:
  1. Domain d4c5aa1: 4c5a A:1-96 [268135]
    Other proteins in same PDB: d4c5aa2, d4c5ab2
    automated match to d1iowa1
    complexed with adp, ds0, gol, mg
  2. Domain d4c5ab1: 4c5a B:3-96 [268133]
    Other proteins in same PDB: d4c5aa2, d4c5ab2
    automated match to d1iowa1
    complexed with adp, ds0, gol, mg
2. Domains for 4c5b:
  1. Domain d4c5ba1: 4c5b A:1-96 [268131]
    Other proteins in same PDB: d4c5ba2, d4c5bb2
    automated match to d1iowa1
    complexed with adp, co3, dal, gol, imd, mg
  2. Domain d4c5bb1: 4c5b B:1-96 [268127]
    Other proteins in same PDB: d4c5ba2, d4c5bb2
    automated match to d1iowa1
    complexed with adp, co3, dal, gol, imd, mg
3. Domains for 4c5c:
  1. Domain d4c5ca1: 4c5c A:1-96 [268137]
    Other proteins in same PDB: d4c5ca2, d4c5cb2
    automated match to d1iowa1
    complexed with atp, dal, gol, mg
  2. Domain d4c5cb1: 4c5c B:1-96 [268139]
    Other proteins in same PDB: d4c5ca2, d4c5cb2
    automated match to d1iowa1
    complexed with atp, dal, gol, mg
Geobacillus kaustophilus [TaxId:1462] [255709] (4 PDB entries)
1. Domain for 2yrw:
  - Domain d2yrwa1: 2yrw A:1-101 [244803]
    Other proteins in same PDB: d2yrwa2, d2yrwa3, d2yrwa4
    automated match to d1gsoa2
    complexed with po4
2. Domain for 2yrx:
  - Domain d2yrxa1: 2yrx A:1-101 [244806]
    Other proteins in same PDB: d2yrxa2, d2yrxa3, d2yrxa4
    automated match to d1gsoa2
    complexed with amp, po4
3. Domain for 2ys6:
  - Domain d2ys6a1: 2ys6 A:1-101 [244812]
    Other proteins in same PDB: d2ys6a2, d2ys6a3, d2ys6a4
    automated match to d1gsoa2
    complexed with amp, gly
4. Domain for 2ys7:
  - Domain d2ys7a1: 2ys7 A:1-101 [244815]
    Other proteins in same PDB: d2ys7a2, d2ys7a3, d2ys7a4
    automated match to d1gsoa2
Geobacillus thermodenitrificans [TaxId:33940] [255125] (1 PDB entry)
- Domains for 2dzd:
  1. Domain d2dzda1: 2dzd A:3-120 [241665]
    Other proteins in same PDB: d2dzda2, d2dzda3, d2dzdb2, d2dzdb3
    automated match to d1ulza2
  2. Domain d2dzdb1: 2dzd B:3-120 [241668]
    Other proteins in same PDB: d2dzda2, d2dzda3, d2dzdb2, d2dzdb3
    automated match to d1ulza2
Haemophilus influenzae [TaxId:71421] [268351] (8 PDB entries)
1. Domain for 4mv1:
  - Domain d4mv1a1: 4mv1 A:1-114 [268367]
    Other proteins in same PDB: d4mv1a2, d4mv1a3
    automated match to d3rv3a1
    complexed with adp, edo, po4
2. Domain for 4mv3:
  - Domain d4mv3a1: 4mv3 A:1-114 [268374]
    Other proteins in same PDB: d4mv3a2, d4mv3a3
    automated match to d3rv3a1
    complexed with acp, bct, edo
3. Domain for 4mv4:
  - Domain d4mv4a1: 4mv4 A:1-114 [268371]
    Other proteins in same PDB: d4mv4a2, d4mv4a3
    automated match to d3rv3a1
    complexed with acp, cl, edo, mg
4. Domain for 4mv6:
  - Domain d4mv6a1: 4mv6 A:1-114 [268358]
    Other proteins in same PDB: d4mv6a2, d4mv6a3
    automated match to d3rv3a1
    complexed with edo, pct
5. Domain for 4mv7:
  - Domain d4mv7a1: 4mv7 A:1-114 [268361]
    Other proteins in same PDB: d4mv7a2, d4mv7a3
    automated match to d3rv3a1
    complexed with edo, ppf
6. Domain for 4mv8:
  - Domain d4mv8a1: 4mv8 A:1-114 [268352]
    Other proteins in same PDB: d4mv8a2, d4mv8a3
    automated match to d3rv3a1
    complexed with acp, po4
7. Domain for 4mv9:
  - Domain d4mv9a1: 4mv9 A:1-114 [268364]
    Other proteins in same PDB: d4mv9a2, d4mv9a3
    automated match to d3rv3a1
    complexed with bct, edo
8. Domain for 4rzq:
  - Domain d4rzqa1: 4rzq A:1-114 [273719]
    Other proteins in same PDB: d4rzqa2, d4rzqa3, d4rzqa4
    automated match to d3rv3a1
    complexed with adp, y7y
Human (Homo sapiens) [TaxId:9606] [225246] (2 PDB entries)
1. Domains for 2p0a:
  1. Domain d2p0aa1: 2p0a A:90-192 [205401]
    Other proteins in same PDB: d2p0aa2, d2p0ab2
    automated match to d1i7na1
    complexed with anp, cl, edo, so4
  2. Domain d2p0ab1: 2p0a B:90-192 [205403]
    Other proteins in same PDB: d2p0aa2, d2p0ab2
    automated match to d1i7na1
    complexed with anp, cl, edo, so4
2. Domains for 2qk4:
  1. Domain d2qk4a1: 2qk4 A:1-105 [243583]
    Other proteins in same PDB: d2qk4a2, d2qk4a3, d2qk4a4, d2qk4b2, d2qk4b3, d2qk4b4
    automated match to d1gsoa2
    complexed with atp, cl, gol, so4
  2. Domain d2qk4b1: 2qk4 B:1-105 [243586]
    Other proteins in same PDB: d2qk4a2, d2qk4a3, d2qk4a4, d2qk4b2, d2qk4b3, d2qk4b4
    automated match to d1gsoa2
    complexed with atp, cl, gol, so4
Mycobacterium tuberculosis [TaxId:1773] [225851] (1 PDB entry)
- Domains for 3lwb:
  1. Domain d3lwba1: 3lwb A:7-150 [213077]
    Other proteins in same PDB: d3lwba2, d3lwbb2
    automated match to d1ehib1
    complexed with no3
  2. Domain d3lwbb1: 3lwb B:10-150 [213079]
    Other proteins in same PDB: d3lwba2, d3lwbb2
    automated match to d1ehib1
    complexed with no3
Mycobacterium tuberculosis [TaxId:83332] [330746] (1 PDB entry)
- Domains for 5mlk:
  1. Domain d5mlka1: 5mlk A:10-124 [330747]
    Other proteins in same PDB: d5mlka2, d5mlka3, d5mlkb2
    automated match to d2vqda1
  2. Domain d5mlkb1: 5mlk B:10-124 [330770]
    Other proteins in same PDB: d5mlka2, d5mlka3, d5mlkb2
    automated match to d2vqda1
Neisseria gonorrhoeae [TaxId:521006] [333083] (1 PDB entry)
- Domains for 5vev:
  1. Domain d5veva1: 5vev A:1-101 [333084]
    Other proteins in same PDB: d5veva2, d5veva3, d5veva4, d5vevb2, d5vevb3, d5vevb4
    automated match to d1gsoa2
    complexed with act, edo, na, so4
  2. Domain d5vevb1: 5vev B:1-101 [333115]
    Other proteins in same PDB: d5veva2, d5veva3, d5veva4, d5vevb2, d5vevb3, d5vevb4
    automated match to d1gsoa2
    complexed with act, edo, na, so4
Pseudomonas aeruginosa [TaxId:287] [255072] (2 PDB entries)
1. Domains for 2c00:
  1. Domain d2c00a1: 2c00 A:1-114 [241397]
    Other proteins in same PDB: d2c00a2, d2c00a3, d2c00b2, d2c00b3
    automated match to d2w70a1
    complexed with so4
  2. Domain d2c00b1: 2c00 B:1-114 [241400]
    Other proteins in same PDB: d2c00a2, d2c00a3, d2c00b2, d2c00b3
    automated match to d2w70a1
    complexed with so4
2. Domain for 2vqd:
  - Domain d2vqda1: 2vqd A:1-114 [243928]
    Other proteins in same PDB: d2vqda2, d2vqda3
    automated match to d2w70a1
    complexed with ap2, mg, so4

Rattus norvegicus [TaxId:10116] [339509] (1 PDB entry)

Domain for 5jcb:

Domain d5jcbf1: 5jcb F:1-76 [339510]
Other proteins in same PDB: d5jcba1, d5jcba2, d5jcbb1, d5jcbb2, d5jcbc1, d5jcbc2, d5jcbd1, d5jcbd2, d5jcbe_
automated match to d3tiia1
complexed with acp, ca, gdp, gol, gtp, imd, mes, mg, na, nv4, peg

Salmonella enterica [TaxId:90371] [226056] (1 PDB entry)
- Domains for 3q1k:
  1. Domain d3q1ka1: 3q1k A:2-139 [215021]
    Other proteins in same PDB: d3q1ka2, d3q1kb2, d3q1kc2, d3q1kd2
    automated match to d1ehib1
    complexed with adp, fmt, gol, mg, so4
  2. Domain d3q1kb1: 3q1k B:2-139 [215023]
    Other proteins in same PDB: d3q1ka2, d3q1kb2, d3q1kc2, d3q1kd2
    automated match to d1ehib1
    complexed with adp, fmt, gol, mg, so4
  3. Domain d3q1kc1: 3q1k C:2-139 [215025]
    Other proteins in same PDB: d3q1ka2, d3q1kb2, d3q1kc2, d3q1kd2
    automated match to d1ehib1
    complexed with adp, fmt, gol, mg, so4
  4. Domain d3q1kd1: 3q1k D:3-139 [215027]
    Other proteins in same PDB: d3q1ka2, d3q1kb2, d3q1kc2, d3q1kd2
    automated match to d1ehib1
    complexed with adp, fmt, gol, mg, so4
Salmonella typhimurium [TaxId:90371] [225723] (1 PDB entry)
- Domains for 3i12:
  1. Domain d3i12a1: 3i12 A:2-139 [211417]
    Other proteins in same PDB: d3i12a2, d3i12b2, d3i12c2, d3i12d2
    automated match to d1ehib1
    complexed with adp
  2. Domain d3i12b1: 3i12 B:1-139 [211419]
    Other proteins in same PDB: d3i12a2, d3i12b2, d3i12c2, d3i12d2
    automated match to d1ehib1
    complexed with adp
  3. Domain d3i12c1: 3i12 C:2-139 [211421]
    Other proteins in same PDB: d3i12a2, d3i12b2, d3i12c2, d3i12d2
    automated match to d1ehib1
    complexed with adp
  4. Domain d3i12d1: 3i12 D:3-139 [211423]
    Other proteins in same PDB: d3i12a2, d3i12b2, d3i12c2, d3i12d2
    automated match to d1ehib1
    complexed with adp
Staphylococcus aureus [TaxId:1280] [225145] (3 PDB entries)
1. Domains for 2i80:
  1. Domain d2i80a1: 2i80 A:3-128 [204737]
    Other proteins in same PDB: d2i80a2, d2i80a3, d2i80b2, d2i80b3
    automated match to d1ehib1
    complexed with g1l
  2. Domain d2i80b1: 2i80 B:3-128 [204739]
    Other proteins in same PDB: d2i80a2, d2i80a3, d2i80b2, d2i80b3
    automated match to d1ehib1
    complexed with g1l
2. Domains for 2vpq:
  1. Domain d2vpqa1: 2vpq A:2-114 [243922]
    Other proteins in same PDB: d2vpqa2, d2vpqa3, d2vpqb2, d2vpqb3
    automated match to d1ulza2
    complexed with anp, cl, mg
  2. Domain d2vpqb1: 2vpq B:2-114 [243925]
    Other proteins in same PDB: d2vpqa2, d2vpqa3, d2vpqb2, d2vpqb3
    automated match to d1ulza2
    complexed with anp, cl, mg
3. Domains for 3n8d:
  1. Domain d3n8da1: 3n8d A:2-128 [213785]
    Other proteins in same PDB: d3n8da2, d3n8db2, d3n8db3
    automated match to d1ehib1
    complexed with anp, cl, so4
  2. Domain d3n8db1: 3n8d B:2-128 [213787]
    Other proteins in same PDB: d3n8da2, d3n8db2, d3n8db3
    automated match to d1ehib1
    complexed with anp, cl, so4
Staphylococcus aureus [TaxId:93062] [225143] (2 PDB entries)
1. Domains for 2i87:
  1. Domain d2i87a1: 2i87 A:3-128 [204746]
    Other proteins in same PDB: d2i87a2, d2i87a3, d2i87b2, d2i87b3
    automated match to d1ehib1
    complexed with so4
  2. Domain d2i87b1: 2i87 B:3-128 [204748]
    Other proteins in same PDB: d2i87a2, d2i87a3, d2i87b2, d2i87b3
    automated match to d1ehib1
    complexed with so4
2. Domains for 2i8c:
  1. Domain d2i8ca1: 2i8c A:3-128 [204750]
    Other proteins in same PDB: d2i8ca2, d2i8ca3, d2i8cb2, d2i8cb3
    automated match to d1ehib1
    complexed with adp, mg, so4
  2. Domain d2i8cb1: 2i8c B:3-128 [204752]
    Other proteins in same PDB: d2i8ca2, d2i8ca3, d2i8cb2, d2i8cb3
    automated match to d1ehib1
    complexed with adp, mg, so4
Streptococcus mutans [TaxId:1309] [232664] (1 PDB entry)
- Domains for 3k3p:
  1. Domain d3k3pa1: 3k3p A:3-126 [232665]
    Other proteins in same PDB: d3k3pa2, d3k3pb2
    automated match to d3n8da1
  2. Domain d3k3pb1: 3k3p B:3-126 [232668]
    Other proteins in same PDB: d3k3pa2, d3k3pb2
    automated match to d3n8da1

Sus scrofa [TaxId:9823] [317436] (1 PDB entry)

Domain for 5fnv:

Domain d5fnvf1: 5fnv F:1-76 [317437]
Other proteins in same PDB: d5fnva1, d5fnva2, d5fnvb1, d5fnvb2, d5fnvc1, d5fnvc2, d5fnvd1, d5fnvd2, d5fnve_, d5fnvf2
automated match to d3tiia1
complexed with acp, ca, gdp, gtp, mes, mg, x3h

Thermus caldophilus [TaxId:272] [225124] (1 PDB entry)
- Domain for 2fb9:
  - Domain d2fb9a1: 2fb9 A:4-117 [204188]
    Other proteins in same PDB: d2fb9a2, d2fb9a3
    automated match to d1e4ea1
Thermus thermophilus HB8 [TaxId:300852] [225372] (3 PDB entries)
1. Domains for 2yzg:
  1. Domain d2yzga1: 2yzg A:1-114 [207743]
    Other proteins in same PDB: d2yzga2, d2yzgb2, d2yzgc2
    automated match to d1e4ea1
  2. Domain d2yzgb1: 2yzg B:1-114 [207745]
    Other proteins in same PDB: d2yzga2, d2yzgb2, d2yzgc2
    automated match to d1e4ea1
  3. Domain d2yzgc1: 2yzg C:1-114 [207747]
    Other proteins in same PDB: d2yzga2, d2yzgb2, d2yzgc2
    automated match to d1e4ea1
2. Domains for 2yzm:
  1. Domain d2yzma1: 2yzm A:1-114 [207749]
    Other proteins in same PDB: d2yzma2, d2yzmb2, d2yzmc2
    automated match to d1e4ea1
    complexed with dal
  2. Domain d2yzmb1: 2yzm B:1-114 [207751]
    Other proteins in same PDB: d2yzma2, d2yzmb2, d2yzmc2
    automated match to d1e4ea1
    complexed with dal
  3. Domain d2yzmc1: 2yzm C:1-114 [207753]
    Other proteins in same PDB: d2yzma2, d2yzmb2, d2yzmc2
    automated match to d1e4ea1
    complexed with dal
3. Domains for 2yzn:
  1. Domain d2yzna1: 2yzn A:1-114 [207755]
    Other proteins in same PDB: d2yzna2, d2yznb2, d2yznc2
    automated match to d1e4ea1
    complexed with anp
  2. Domain d2yznb1: 2yzn B:1-114 [207757]
    Other proteins in same PDB: d2yzna2, d2yznb2, d2yznc2
    automated match to d1e4ea1
    complexed with anp
  3. Domain d2yznc1: 2yzn C:1-114 [207759]
    Other proteins in same PDB: d2yzna2, d2yznb2, d2yznc2
    automated match to d1e4ea1
    complexed with anp
Thermus thermophilus [TaxId:274] [226603] (4 PDB entries)
1. Domains for 2zdg:
  1. Domain d2zdga1: 2zdg A:1-114 [207822]
    Other proteins in same PDB: d2zdga2, d2zdgb2, d2zdgc2, d2zdgd2
    automated match to d1e4ea1
    complexed with adp, mg
  2. Domain d2zdgb1: 2zdg B:1-114 [207824]
    Other proteins in same PDB: d2zdga2, d2zdgb2, d2zdgc2, d2zdgd2
    automated match to d1e4ea1
    complexed with adp, mg
  3. Domain d2zdgc1: 2zdg C:1-114 [207826]
    Other proteins in same PDB: d2zdga2, d2zdgb2, d2zdgc2, d2zdgd2
    automated match to d1e4ea1
    complexed with adp, mg
  4. Domain d2zdgd1: 2zdg D:1-114 [207828]
    Other proteins in same PDB: d2zdga2, d2zdgb2, d2zdgc2, d2zdgd2
    automated match to d1e4ea1
    complexed with adp, mg
2. Domains for 2zdh:
  1. Domain d2zdha1: 2zdh A:1-114 [207830]
    Other proteins in same PDB: d2zdha2, d2zdhb2, d2zdhc2, d2zdhd2
    automated match to d1e4ea1
    complexed with adp, dal, mg
  2. Domain d2zdhb1: 2zdh B:1-114 [207832]
    Other proteins in same PDB: d2zdha2, d2zdhb2, d2zdhc2, d2zdhd2
    automated match to d1e4ea1
    complexed with adp, dal, mg
  3. Domain d2zdhc1: 2zdh C:1-114 [207834]
    Other proteins in same PDB: d2zdha2, d2zdhb2, d2zdhc2, d2zdhd2
    automated match to d1e4ea1
    complexed with adp, dal, mg
  4. Domain d2zdhd1: 2zdh D:1-114 [207836]
    Other proteins in same PDB: d2zdha2, d2zdhb2, d2zdhc2, d2zdhd2
    automated match to d1e4ea1
    complexed with adp, dal, mg
3. Domains for 2zdq:
  1. Domain d2zdqa1: 2zdq A:1-114 [207838]
    Other proteins in same PDB: d2zdqa2, d2zdqb2
    automated match to d1e4ea1
    complexed with atp, dal
  2. Domain d2zdqb1: 2zdq B:1-114 [207840]
    Other proteins in same PDB: d2zdqa2, d2zdqb2
    automated match to d1e4ea1
    complexed with atp, dal
4. Domains for 3vpd:
  1. Domain d3vpda1: 3vpd A:1-88 [217979]
    Other proteins in same PDB: d3vpda2, d3vpdb2
    automated match to d1uc8a1
    complexed with anp, bua, cit
  2. Domain d3vpdb1: 3vpd B:1-88 [217981]
    Other proteins in same PDB: d3vpda2, d3vpdb2
    automated match to d1uc8a1
    complexed with anp, bua, cit
Xanthomonas oryzae [TaxId:291331] [226135] (1 PDB entry)
- Domain for 3r5f:
  - Domain d3r5fa1: 3r5f A:3-139 [215588]
    Other proteins in same PDB: d3r5fa2
    automated match to d1ehia1
    complexed with atp, mg
Xanthomonas oryzae [TaxId:342109] [225704] (4 PDB entries)
1. Domain for 3e5n:
  - Domain d3e5na1: 3e5n A:2-139 [209386]
    Other proteins in same PDB: d3e5na2
    automated match to d1ehib1
2. Domain for 3rfc:
  - Domain d3rfca1: 3rfc A:2-139 [215788]
    Other proteins in same PDB: d3rfca2
    automated match to d1ehia1
    complexed with adp, mg
3. Domain for 4l1k:
  - Domain d4l1ka1: 4l1k A:2-139 [237032]
    Other proteins in same PDB: d4l1ka2
    automated match to d3rfca1
    complexed with anp, mg
4. Domain for 4me6:
  - Domain d4me6a1: 4me6 A:2-139 [237066]
    Other proteins in same PDB: d4me6a2
    automated match to d3e5na1
    complexed with adp, mg
Yersinia pestis [TaxId:214092] [226276] (2 PDB entries)
1. Domain for 3mjf:
  - Domain d3mjfa1: 3mjf A:1-103 [247724]
    Other proteins in same PDB: d3mjfa2, d3mjfa3, d3mjfa4
    automated match to d1gsoa2
    complexed with bme, edo, gol, na, peg, pge, so4
2. Domains for 3v4z:
  1. Domain d3v4za1: 3v4z A:2-96 [217663]
    Other proteins in same PDB: d3v4za2, d3v4zb2
    automated match to d1iowa1
    complexed with peg, pge
  2. Domain d3v4zb1: 3v4z B:1-96 [217665]
    Other proteins in same PDB: d3v4za2, d3v4zb2
    automated match to d1iowa1
    complexed with peg, pge
Yersinia pestis [TaxId:632] [280582] (5 PDB entries)
1. Domains for 4zqi:
  1. Domain d4zqia1: 4zqi A:1-96 [280591]
    Other proteins in same PDB: d4zqia2, d4zqib2, d4zqic2, d4zqid2
    automated match to d1iowa1
    complexed with na
  2. Domain d4zqib1: 4zqi B:1-96 [280589]
    Other proteins in same PDB: d4zqia2, d4zqib2, d4zqic2, d4zqid2
    automated match to d1iowa1
    complexed with na
  3. Domain d4zqic1: 4zqi C:1-96 [280583]
    Other proteins in same PDB: d4zqia2, d4zqib2, d4zqic2, d4zqid2
    automated match to d1iowa1
    complexed with na
  4. Domain d4zqid1: 4zqi D:1-96 [280586]
    Other proteins in same PDB: d4zqia2, d4zqib2, d4zqic2, d4zqid2
    automated match to d1iowa1
    complexed with na
2. Domains for 5bpf:
  1. Domain d5bpfa1: 5bpf A:1-96 [312666]
    Other proteins in same PDB: d5bpfa2, d5bpfb2, d5bpfc2, d5bpfd2
    automated match to d1iowa1
    complexed with act, adp, gol, na
  2. Domain d5bpfb1: 5bpf B:1-96 [312613]
    Other proteins in same PDB: d5bpfa2, d5bpfb2, d5bpfc2, d5bpfd2
    automated match to d1iowa1
    complexed with act, adp, gol, na
  3. Domain d5bpfc1: 5bpf C:1-96 [312682]
    Other proteins in same PDB: d5bpfa2, d5bpfb2, d5bpfc2, d5bpfd2
    automated match to d1iowa1
    complexed with act, adp, gol, na
  4. Domain d5bpfd1: 5bpf D:1-96 [312649]
    Other proteins in same PDB: d5bpfa2, d5bpfb2, d5bpfc2, d5bpfd2
    automated match to d1iowa1
    complexed with act, adp, gol, na
3. Domains for 5bph:
  1. Domain d5bpha1: 5bph A:1-96 [312602]
    Other proteins in same PDB: d5bpha2, d5bphb2, d5bphc2, d5bphd2
    automated match to d1iowa1
    complexed with act, amp, gol, na
  2. Domain d5bphb1: 5bph B:2-96 [312638]
    Other proteins in same PDB: d5bpha2, d5bphb2, d5bphc2, d5bphd2
    automated match to d1iowa1
    complexed with act, amp, gol, na
  3. Domain d5bphc1: 5bph C:1-96 [312611]
    Other proteins in same PDB: d5bpha2, d5bphb2, d5bphc2, d5bphd2
    automated match to d1iowa1
    complexed with act, amp, gol, na
  4. Domain d5bphd1: 5bph D:1-96 [312615]
    Other proteins in same PDB: d5bpha2, d5bphb2, d5bphc2, d5bphd2
    automated match to d1iowa1
    complexed with act, amp, gol, na
4. Domains for 5c1o:
  1. Domain d5c1oa1: 5c1o A:1-96 [312699]
    Other proteins in same PDB: d5c1oa2, d5c1ob2, d5c1oc2, d5c1od2
    automated match to d1iowa1
    complexed with anp, mg, na
  2. Domain d5c1ob1: 5c1o B:1-96 [312662]
    Other proteins in same PDB: d5c1oa2, d5c1ob2, d5c1oc2, d5c1od2
    automated match to d1iowa1
    complexed with anp, mg, na
  3. Domain d5c1oc1: 5c1o C:1-96 [312695]
    Other proteins in same PDB: d5c1oa2, d5c1ob2, d5c1oc2, d5c1od2
    automated match to d1iowa1
    complexed with anp, mg, na
  4. Domain d5c1od1: 5c1o D:1-96 [312677]
    Other proteins in same PDB: d5c1oa2, d5c1ob2, d5c1oc2, d5c1od2
    automated match to d1iowa1
    complexed with anp, mg, na
5. Domains for 5c1p:
  1. Domain d5c1pa1: 5c1p A:1-96 [312701]
    Other proteins in same PDB: d5c1pa2, d5c1pb2, d5c1pc2, d5c1pd2
    automated match to d1iowa1
    complexed with act, adp, dal, gol, na
  2. Domain d5c1pb1: 5c1p B:1-96 [312691]
    Other proteins in same PDB: d5c1pa2, d5c1pb2, d5c1pc2, d5c1pd2
    automated match to d1iowa1
    complexed with act, adp, dal, gol, na
  3. Domain d5c1pc1: 5c1p C:1-96 [312749]
    Other proteins in same PDB: d5c1pa2, d5c1pb2, d5c1pc2, d5c1pd2
    automated match to d1iowa1
    complexed with act, adp, dal, gol, na
  4. Domain d5c1pd1: 5c1p D:2-96 [312705]
    Other proteins in same PDB: d5c1pa2, d5c1pb2, d5c1pc2, d5c1pd2
    automated match to d1iowa1
    complexed with act, adp, dal, gol, na

More info for Protein automated matches from c.30.1.0: automated matches

Timeline for Protein automated matches from c.30.1.0: automated matches:

Protein automated matches from c.30.1.0: automated matches first appeared in SCOPe 2.03
Protein automated matches from c.30.1.0: automated matches appears in SCOPe 2.05
Protein automated matches from c.30.1.0: automated matches appears in SCOPe 2.07
Protein automated matches from c.30.1.0: automated matches appears in the current release, SCOPe 2.08