Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2978140Fold d.139: PurM C-terminal domain-like [56041] (1 superfamily)
    3 layers: alpha/beta/alpha; partial topological similarity to the ferredoxin-like fold
  4. 2978141Superfamily d.139.1: PurM C-terminal domain-like [56042] (2 families) (S)
  5. 2978221Family d.139.1.0: automated matches [227182] (1 protein)
    not a true family
  6. 2978222Protein automated matches [226902] (12 species)
    not a true protein

Species:

  1. 2978223Acinetobacter baumannii [TaxId:470] [276304] (4 PDB entries)
    1. Domains for 5cm7:
      1. 2978224Domain d5cm7a2: 5cm7 A:137-305 [276305]
        Other proteins in same PDB: d5cm7a1, d5cm7b1
        automated match to d3mcqa2
        complexed with adp, ca, mg, na, tpp
      2. 2978225Domain d5cm7b2: 5cm7 B:137-305 [276307]
        Other proteins in same PDB: d5cm7a1, d5cm7b1
        automated match to d3mcqa2
        complexed with adp, ca, mg, na, tpp
    2. Domains for 5d9u:
      1. 2978228Domain d5d9ua2: 5d9u A:137-305 [276559]
        Other proteins in same PDB: d5d9ua1, d5d9ub1
        automated match to d3mcqa2
        complexed with adp, mg, na, tpp
      2. 2978229Domain d5d9ub2: 5d9u B:137-304 [276561]
        Other proteins in same PDB: d5d9ua1, d5d9ub1
        automated match to d3mcqa2
        complexed with adp, mg, na, tpp
    3. Domains for 5dd7:
      1. 2978226Domain d5dd7a2: 5dd7 A:137-305 [276912]
        Other proteins in same PDB: d5dd7a1, d5dd7b1
        automated match to d3mcqa2
        complexed with anp, edo, k, mg, tps
      2. 2978227Domain d5dd7b2: 5dd7 B:137-305 [276914]
        Other proteins in same PDB: d5dd7a1, d5dd7b1
        automated match to d3mcqa2
        complexed with anp, edo, k, mg, tps
    4. Domains for 6mfm:
      1. 2978230Domain d6mfma2: 6mfm A:137-305 [358083]
        Other proteins in same PDB: d6mfma1, d6mfmb1
        automated match to d5cm7a2
        complexed with adp, mg, na, tpp
      2. 2978231Domain d6mfmb2: 6mfm B:137-304 [358137]
        Other proteins in same PDB: d6mfma1, d6mfmb1
        automated match to d5cm7a2
        complexed with adp, mg, na, tpp
  2. 2978232Acinetobacter baumannii [TaxId:525243] [276534] (1 PDB entry)
  3. 2978235Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [225123] (1 PDB entry)
  4. 2978238Escherichia coli K-12 [TaxId:83333] [256108] (1 PDB entry)
  5. 2978241Francisella tularensis [TaxId:119856] [226091] (1 PDB entry)
  6. 2978244Geobacillus kaustophilus [TaxId:1462] [225375] (1 PDB entry)
  7. 2978246Human (Homo sapiens) [TaxId:9606] [225336] (1 PDB entry)
  8. 2978249Methylobacillus flagellatus [TaxId:265072] [225899] (1 PDB entry)
  9. 2978251Neisseria gonorrhoeae [TaxId:485] [334375] (1 PDB entry)
  10. 2978254Stenotrophomonas maltophilia [TaxId:522373] [388343] (1 PDB entry)
  11. 2978256Thermus thermophilus [TaxId:300852] [311487] (1 PDB entry)
  12. 2978265Vibrio cholerae [TaxId:666] [225999] (1 PDB entry)

More info for Protein automated matches from d.139.1.0: automated matches

Timeline for Protein automated matches from d.139.1.0: automated matches: