Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2369212Fold b.12: Lipase/lipooxygenase domain (PLAT/LH2 domain) [49722] (1 superfamily)
    sandwich; 8 strands in 2 sheets; complex topology
    duplication: has weak internal pseudo twofold symmetry
  4. 2369213Superfamily b.12.1: Lipase/lipooxygenase domain (PLAT/LH2 domain) [49723] (4 families) (S)
  5. 2369296Family b.12.1.0: automated matches [227174] (1 protein)
    not a true family
  6. 2369297Protein automated matches [226891] (5 species)
    not a true protein

Species:

  1. 2369298Clostridium perfringens [TaxId:1502] [225789] (1 PDB entry)
  2. 2369300Horse (Equus caballus) [TaxId:9796] [225096] (1 PDB entry)
  3. 2369302Human (Homo sapiens) [TaxId:9606] [225245] (7 PDB entries)
    1. Domains for 2oxe:
      1. 2369310Domain d2oxea2: 2oxe A:356-469 [205397]
        Other proteins in same PDB: d2oxea1, d2oxeb1
        automated match to d1bu8a1
        complexed with ca, cl
      2. 2369311Domain d2oxeb2: 2oxe B:356-469 [205399]
        Other proteins in same PDB: d2oxea1, d2oxeb1
        automated match to d1bu8a1
        complexed with ca, cl
    2. Domain for 2ppl:
    3. Domains for 2pvs:
      1. 2369308Domain d2pvsa2: 2pvs A:337-450 [243501]
        Other proteins in same PDB: d2pvsa1, d2pvsb1
        automated match to d2oxea2
        complexed with ca, so4; mutant
      2. 2369309Domain d2pvsb2: 2pvs B:337-450 [243503]
        Other proteins in same PDB: d2pvsa1, d2pvsb1
        automated match to d2oxea2
        complexed with ca, so4; mutant
    4. Domain for 3o8y:
    5. Domain for 3v92:
    6. Domain for 3v98:
    7. Domain for 3v99:
  4. 2369312Rabbit (Oryctolagus cuniculus) [TaxId:9986] [255537] (1 PDB entry)
  5. 2369315Soybean (Glycine max) [TaxId:3847] [225161] (2 PDB entries)
    1. Domain for 2iuj:
    2. Domains for 2iuk:
      1. 2369317Domain d2iuka1: 2iuk A:8-175 [230790]
        Other proteins in same PDB: d2iuka2, d2iukb2
        automated match to d1n8qa2
        complexed with fe
      2. 2369318Domain d2iukb1: 2iuk B:1008-1175 [230788]
        Other proteins in same PDB: d2iuka2, d2iukb2
        automated match to d1n8qa2
        complexed with fe

More info for Protein automated matches from b.12.1.0: automated matches

Timeline for Protein automated matches from b.12.1.0: automated matches: