Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1336837Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1346342Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 1346343Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 1348919Family c.2.1.5: LDH N-terminal domain-like [51848] (9 proteins)
  6. 1349240Protein automated matches [226881] (5 species)
    not a true protein

Species:

  1. 1349241Chloroflexus aurantiacus [TaxId:1108] [226645] (1 PDB entry)
  2. 1349244Haloarcula marismortui [TaxId:2238] [225147] (4 PDB entries)
    1. Domains for 2j5k:
      1. 1349249Domain d2j5ka1: 2j5k A:22-162 [138037]
        Other proteins in same PDB: d2j5ka2, d2j5kb2, d2j5kc2, d2j5kd2
        automated match to d1o6za1
        complexed with cl
      2. 1349250Domain d2j5kb1: 2j5k B:22-162 [138039]
        Other proteins in same PDB: d2j5ka2, d2j5kb2, d2j5kc2, d2j5kd2
        automated match to d1o6za1
        complexed with cl
      3. 1349251Domain d2j5kc1: 2j5k C:22-162 [138041]
        Other proteins in same PDB: d2j5ka2, d2j5kb2, d2j5kc2, d2j5kd2
        automated match to d1o6za1
        complexed with cl
      4. 1349252Domain d2j5kd1: 2j5k D:22-162 [138043]
        Other proteins in same PDB: d2j5ka2, d2j5kb2, d2j5kc2, d2j5kd2
        automated match to d1o6za1
        complexed with cl
    2. Domains for 2j5q:
      1. 1349253Domain d2j5qa1: 2j5q A:22-162 [138051]
        Other proteins in same PDB: d2j5qa2, d2j5qb2, d2j5qc2, d2j5qd2
        automated match to d1o6za1
        complexed with cl
      2. 1349254Domain d2j5qb1: 2j5q B:22-162 [138053]
        Other proteins in same PDB: d2j5qa2, d2j5qb2, d2j5qc2, d2j5qd2
        automated match to d1o6za1
        complexed with cl
      3. 1349255Domain d2j5qc1: 2j5q C:22-162 [138055]
        Other proteins in same PDB: d2j5qa2, d2j5qb2, d2j5qc2, d2j5qd2
        automated match to d1o6za1
        complexed with cl
      4. 1349256Domain d2j5qd1: 2j5q D:22-162 [138057]
        Other proteins in same PDB: d2j5qa2, d2j5qb2, d2j5qc2, d2j5qd2
        automated match to d1o6za1
        complexed with cl
    3. Domains for 2j5r:
      1. 1349257Domain d2j5ra1: 2j5r A:22-162 [138059]
        Other proteins in same PDB: d2j5ra2, d2j5rb2, d2j5rc2, d2j5rd2
        automated match to d1o6za1
        complexed with cl
      2. 1349258Domain d2j5rb1: 2j5r B:22-162 [138061]
        Other proteins in same PDB: d2j5ra2, d2j5rb2, d2j5rc2, d2j5rd2
        automated match to d1o6za1
        complexed with cl
      3. 1349259Domain d2j5rc1: 2j5r C:22-162 [138063]
        Other proteins in same PDB: d2j5ra2, d2j5rb2, d2j5rc2, d2j5rd2
        automated match to d1o6za1
        complexed with cl
      4. 1349260Domain d2j5rd1: 2j5r D:22-162 [138065]
        Other proteins in same PDB: d2j5ra2, d2j5rb2, d2j5rc2, d2j5rd2
        automated match to d1o6za1
        complexed with cl
    4. Domains for 4jco:
      1. 1349245Domain d4jcoa1: 4jco A:22-162 [223695]
        Other proteins in same PDB: d4jcoa2, d4jcob2, d4jcoc2, d4jcod2
        automated match to d1o6za1
        complexed with cl, na
      2. 1349246Domain d4jcob1: 4jco B:22-162 [223697]
        Other proteins in same PDB: d4jcoa2, d4jcob2, d4jcoc2, d4jcod2
        automated match to d1o6za1
        complexed with cl, na
      3. 1349247Domain d4jcoc1: 4jco C:22-162 [223699]
        Other proteins in same PDB: d4jcoa2, d4jcob2, d4jcoc2, d4jcod2
        automated match to d1o6za1
        complexed with cl, na
      4. 1349248Domain d4jcod1: 4jco D:22-162 [223701]
        Other proteins in same PDB: d4jcoa2, d4jcob2, d4jcoc2, d4jcod2
        automated match to d1o6za1
        complexed with cl, na
  3. 1349261Human (Homo sapiens) [TaxId:9606] [225056] (1 PDB entry)
  4. 1349266Rabbit (Oryctolagus cuniculus) [TaxId:9986] [225718] (5 PDB entries)
    1. Domains for 3h3f:
      1. 1349283Domain d3h3fa1: 3h3f A:1-159 [210814]
        Other proteins in same PDB: d3h3fa2, d3h3fb2, d3h3fc2, d3h3fd2, d3h3fe2, d3h3ff2, d3h3fg2, d3h3fh2
        automated match to d9ldta1
        complexed with act, nai, oxm
      2. 1349284Domain d3h3fb1: 3h3f B:1-159 [210816]
        Other proteins in same PDB: d3h3fa2, d3h3fb2, d3h3fc2, d3h3fd2, d3h3fe2, d3h3ff2, d3h3fg2, d3h3fh2
        automated match to d9ldta1
        complexed with act, nai, oxm
      3. 1349285Domain d3h3fc1: 3h3f C:1-159 [210818]
        Other proteins in same PDB: d3h3fa2, d3h3fb2, d3h3fc2, d3h3fd2, d3h3fe2, d3h3ff2, d3h3fg2, d3h3fh2
        automated match to d9ldta1
        complexed with act, nai, oxm
      4. 1349286Domain d3h3fd1: 3h3f D:1-159 [210820]
        Other proteins in same PDB: d3h3fa2, d3h3fb2, d3h3fc2, d3h3fd2, d3h3fe2, d3h3ff2, d3h3fg2, d3h3fh2
        automated match to d9ldta1
        complexed with act, nai, oxm
      5. 1349287Domain d3h3fe1: 3h3f E:1-159 [210822]
        Other proteins in same PDB: d3h3fa2, d3h3fb2, d3h3fc2, d3h3fd2, d3h3fe2, d3h3ff2, d3h3fg2, d3h3fh2
        automated match to d9ldta1
        complexed with act, nai, oxm
      6. 1349288Domain d3h3ff1: 3h3f F:1-159 [210824]
        Other proteins in same PDB: d3h3fa2, d3h3fb2, d3h3fc2, d3h3fd2, d3h3fe2, d3h3ff2, d3h3fg2, d3h3fh2
        automated match to d9ldta1
        complexed with act, nai, oxm
      7. 1349289Domain d3h3fg1: 3h3f G:1-159 [210826]
        Other proteins in same PDB: d3h3fa2, d3h3fb2, d3h3fc2, d3h3fd2, d3h3fe2, d3h3ff2, d3h3fg2, d3h3fh2
        automated match to d9ldta1
        complexed with act, nai, oxm
      8. 1349290Domain d3h3fh1: 3h3f H:1-159 [210828]
        Other proteins in same PDB: d3h3fa2, d3h3fb2, d3h3fc2, d3h3fd2, d3h3fe2, d3h3ff2, d3h3fg2, d3h3fh2
        automated match to d9ldta1
        complexed with act, nai, oxm
    2. Domains for 4i8x:
      1. 1349275Domain d4i8xa1: 4i8x A:1-159 [223016]
        Other proteins in same PDB: d4i8xa2, d4i8xb2, d4i8xc2, d4i8xd2, d4i8xe2, d4i8xf2, d4i8xg2, d4i8xh2
        automated match to d9ldta1
        complexed with 6p3
      2. 1349276Domain d4i8xb1: 4i8x B:1-159 [223018]
        Other proteins in same PDB: d4i8xa2, d4i8xb2, d4i8xc2, d4i8xd2, d4i8xe2, d4i8xf2, d4i8xg2, d4i8xh2
        automated match to d9ldta1
        complexed with 6p3
      3. 1349277Domain d4i8xc1: 4i8x C:1-159 [223020]
        Other proteins in same PDB: d4i8xa2, d4i8xb2, d4i8xc2, d4i8xd2, d4i8xe2, d4i8xf2, d4i8xg2, d4i8xh2
        automated match to d9ldta1
        complexed with 6p3
      4. 1349278Domain d4i8xd1: 4i8x D:1-159 [223022]
        Other proteins in same PDB: d4i8xa2, d4i8xb2, d4i8xc2, d4i8xd2, d4i8xe2, d4i8xf2, d4i8xg2, d4i8xh2
        automated match to d9ldta1
        complexed with 6p3
      5. 1349279Domain d4i8xe1: 4i8x E:1-159 [223024]
        Other proteins in same PDB: d4i8xa2, d4i8xb2, d4i8xc2, d4i8xd2, d4i8xe2, d4i8xf2, d4i8xg2, d4i8xh2
        automated match to d9ldta1
        complexed with 6p3
      6. 1349280Domain d4i8xf1: 4i8x F:1-159 [223026]
        Other proteins in same PDB: d4i8xa2, d4i8xb2, d4i8xc2, d4i8xd2, d4i8xe2, d4i8xf2, d4i8xg2, d4i8xh2
        automated match to d9ldta1
        complexed with 6p3
      7. 1349281Domain d4i8xg1: 4i8x G:1-159 [223028]
        Other proteins in same PDB: d4i8xa2, d4i8xb2, d4i8xc2, d4i8xd2, d4i8xe2, d4i8xf2, d4i8xg2, d4i8xh2
        automated match to d9ldta1
        complexed with 6p3
      8. 1349282Domain d4i8xh1: 4i8x H:1-159 [223030]
        Other proteins in same PDB: d4i8xa2, d4i8xb2, d4i8xc2, d4i8xd2, d4i8xe2, d4i8xf2, d4i8xg2, d4i8xh2
        automated match to d9ldta1
        complexed with 6p3
    3. Domains for 4i9h:
      1. 1349267Domain d4i9ha1: 4i9h A:1-159 [223034]
        Other proteins in same PDB: d4i9ha2, d4i9hb2, d4i9hc2, d4i9hd2, d4i9he2, d4i9hf2, d4i9hg2, d4i9hh2
        automated match to d9ldta1
        complexed with 1e4
      2. 1349268Domain d4i9hb1: 4i9h B:1-159 [223036]
        Other proteins in same PDB: d4i9ha2, d4i9hb2, d4i9hc2, d4i9hd2, d4i9he2, d4i9hf2, d4i9hg2, d4i9hh2
        automated match to d9ldta1
        complexed with 1e4
      3. 1349269Domain d4i9hc1: 4i9h C:1-159 [223038]
        Other proteins in same PDB: d4i9ha2, d4i9hb2, d4i9hc2, d4i9hd2, d4i9he2, d4i9hf2, d4i9hg2, d4i9hh2
        automated match to d9ldta1
        complexed with 1e4
      4. 1349270Domain d4i9hd1: 4i9h D:1-159 [223040]
        Other proteins in same PDB: d4i9ha2, d4i9hb2, d4i9hc2, d4i9hd2, d4i9he2, d4i9hf2, d4i9hg2, d4i9hh2
        automated match to d9ldta1
        complexed with 1e4
      5. 1349271Domain d4i9he1: 4i9h E:1-159 [223042]
        Other proteins in same PDB: d4i9ha2, d4i9hb2, d4i9hc2, d4i9hd2, d4i9he2, d4i9hf2, d4i9hg2, d4i9hh2
        automated match to d9ldta1
        complexed with 1e4
      6. 1349272Domain d4i9hf1: 4i9h F:1-159 [223044]
        Other proteins in same PDB: d4i9ha2, d4i9hb2, d4i9hc2, d4i9hd2, d4i9he2, d4i9hf2, d4i9hg2, d4i9hh2
        automated match to d9ldta1
        complexed with 1e4
      7. 1349273Domain d4i9hg1: 4i9h G:1-159 [223046]
        Other proteins in same PDB: d4i9ha2, d4i9hb2, d4i9hc2, d4i9hd2, d4i9he2, d4i9hf2, d4i9hg2, d4i9hh2
        automated match to d9ldta1
        complexed with 1e4
      8. 1349274Domain d4i9hh1: 4i9h H:1-159 [223048]
        Other proteins in same PDB: d4i9ha2, d4i9hb2, d4i9hc2, d4i9hd2, d4i9he2, d4i9hf2, d4i9hg2, d4i9hh2
        automated match to d9ldta1
        complexed with 1e4
    4. Domains for 4i9n:
      1. 1349291Domain d4i9na1: 4i9n A:1-159 [223050]
        Other proteins in same PDB: d4i9na2, d4i9nb2, d4i9nc2, d4i9nd2, d4i9ne2, d4i9nf2, d4i9ng2, d4i9nh2
        automated match to d9ldta1
        complexed with 1e5, 1e6
      2. 1349292Domain d4i9nb1: 4i9n B:1-159 [223052]
        Other proteins in same PDB: d4i9na2, d4i9nb2, d4i9nc2, d4i9nd2, d4i9ne2, d4i9nf2, d4i9ng2, d4i9nh2
        automated match to d9ldta1
        complexed with 1e5, 1e6
      3. 1349293Domain d4i9nc1: 4i9n C:1-159 [223054]
        Other proteins in same PDB: d4i9na2, d4i9nb2, d4i9nc2, d4i9nd2, d4i9ne2, d4i9nf2, d4i9ng2, d4i9nh2
        automated match to d9ldta1
        complexed with 1e5, 1e6
      4. 1349294Domain d4i9nd1: 4i9n D:1-159 [223056]
        Other proteins in same PDB: d4i9na2, d4i9nb2, d4i9nc2, d4i9nd2, d4i9ne2, d4i9nf2, d4i9ng2, d4i9nh2
        automated match to d9ldta1
        complexed with 1e5, 1e6
      5. 1349295Domain d4i9ne1: 4i9n E:1-159 [223058]
        Other proteins in same PDB: d4i9na2, d4i9nb2, d4i9nc2, d4i9nd2, d4i9ne2, d4i9nf2, d4i9ng2, d4i9nh2
        automated match to d9ldta1
        complexed with 1e5, 1e6
      6. 1349296Domain d4i9nf1: 4i9n F:1-159 [223060]
        Other proteins in same PDB: d4i9na2, d4i9nb2, d4i9nc2, d4i9nd2, d4i9ne2, d4i9nf2, d4i9ng2, d4i9nh2
        automated match to d9ldta1
        complexed with 1e5, 1e6
      7. 1349297Domain d4i9ng1: 4i9n G:1-159 [223062]
        Other proteins in same PDB: d4i9na2, d4i9nb2, d4i9nc2, d4i9nd2, d4i9ne2, d4i9nf2, d4i9ng2, d4i9nh2
        automated match to d9ldta1
        complexed with 1e5, 1e6
      8. 1349298Domain d4i9nh1: 4i9n H:1-159 [223064]
        Other proteins in same PDB: d4i9na2, d4i9nb2, d4i9nc2, d4i9nd2, d4i9ne2, d4i9nf2, d4i9ng2, d4i9nh2
        automated match to d9ldta1
        complexed with 1e5, 1e6
    5. Domains for 4i9u:
      1. 1349299Domain d4i9ua1: 4i9u A:1-159 [223066]
        Other proteins in same PDB: d4i9ua2, d4i9ub2, d4i9uc2, d4i9ud2, d4i9ue2, d4i9uf2, d4i9ug2, d4i9uh2
        automated match to d9ldta1
        complexed with 1e7
      2. 1349300Domain d4i9ub1: 4i9u B:1-159 [223068]
        Other proteins in same PDB: d4i9ua2, d4i9ub2, d4i9uc2, d4i9ud2, d4i9ue2, d4i9uf2, d4i9ug2, d4i9uh2
        automated match to d9ldta1
        complexed with 1e7
      3. 1349301Domain d4i9uc1: 4i9u C:1-159 [223070]
        Other proteins in same PDB: d4i9ua2, d4i9ub2, d4i9uc2, d4i9ud2, d4i9ue2, d4i9uf2, d4i9ug2, d4i9uh2
        automated match to d9ldta1
        complexed with 1e7
      4. 1349302Domain d4i9ud1: 4i9u D:1-159 [223072]
        Other proteins in same PDB: d4i9ua2, d4i9ub2, d4i9uc2, d4i9ud2, d4i9ue2, d4i9uf2, d4i9ug2, d4i9uh2
        automated match to d9ldta1
        complexed with 1e7
      5. 1349303Domain d4i9ue1: 4i9u E:1-159 [223074]
        Other proteins in same PDB: d4i9ua2, d4i9ub2, d4i9uc2, d4i9ud2, d4i9ue2, d4i9uf2, d4i9ug2, d4i9uh2
        automated match to d9ldta1
        complexed with 1e7
      6. 1349304Domain d4i9uf1: 4i9u F:1-159 [223076]
        Other proteins in same PDB: d4i9ua2, d4i9ub2, d4i9uc2, d4i9ud2, d4i9ue2, d4i9uf2, d4i9ug2, d4i9uh2
        automated match to d9ldta1
        complexed with 1e7
      7. 1349305Domain d4i9ug1: 4i9u G:1-159 [223078]
        Other proteins in same PDB: d4i9ua2, d4i9ub2, d4i9uc2, d4i9ud2, d4i9ue2, d4i9uf2, d4i9ug2, d4i9uh2
        automated match to d9ldta1
        complexed with 1e7
      8. 1349306Domain d4i9uh1: 4i9u H:1-159 [223080]
        Other proteins in same PDB: d4i9ua2, d4i9ub2, d4i9uc2, d4i9ud2, d4i9ue2, d4i9uf2, d4i9ug2, d4i9uh2
        automated match to d9ldta1
        complexed with 1e7
  5. Toxoplasma gondii [TaxId:5811] [233099] (1 PDB entry)

More info for Protein automated matches from c.2.1.5: LDH N-terminal domain-like

Timeline for Protein automated matches from c.2.1.5: LDH N-terminal domain-like: