Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1565956Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 1575461Superfamily c.1.17: Nicotinate/Quinolinate PRTase C-terminal domain-like [51690] (3 families) (S)
    incomplete beta/alpha barrel with parallel beta-sheet of 7 strands
  5. 1575533Family c.1.17.0: automated matches [227169] (1 protein)
    not a true family
  6. 1575534Protein automated matches [226879] (6 species)
    not a true protein

Species:

  1. 1575535Ehrlichia chaffeensis [TaxId:205920] [225806] (1 PDB entry)
  2. 1575540Francisella tularensis [TaxId:177416] [226222] (1 PDB entry)
  3. 1575543Helicobacter pylori [TaxId:210] [225051] (2 PDB entries)
    1. Domains for 2b7n:
      1. 1575544Domain d2b7na2: 2b7n A:103-273 [203562]
        Other proteins in same PDB: d2b7na1, d2b7nb1, d2b7nc1
        automated match to d1qapa1
        complexed with ntm, so4
      2. 1575545Domain d2b7nb2: 2b7n B:103-273 [203564]
        Other proteins in same PDB: d2b7na1, d2b7nb1, d2b7nc1
        automated match to d1qapa1
        complexed with ntm, so4
      3. 1575546Domain d2b7nc2: 2b7n C:103-273 [203566]
        Other proteins in same PDB: d2b7na1, d2b7nb1, d2b7nc1
        automated match to d1qapa1
        complexed with ntm, so4
    2. Domains for 2b7p:
      1. 1575547Domain d2b7pa2: 2b7p A:103-273 [203568]
        Other proteins in same PDB: d2b7pa1, d2b7pb1, d2b7pc1
        automated match to d1qapa1
        complexed with pht, so4
      2. 1575548Domain d2b7pb2: 2b7p B:103-273 [203570]
        Other proteins in same PDB: d2b7pa1, d2b7pb1, d2b7pc1
        automated match to d1qapa1
        complexed with pht, so4
      3. 1575549Domain d2b7pc2: 2b7p C:103-273 [203572]
        Other proteins in same PDB: d2b7pa1, d2b7pb1, d2b7pc1
        automated match to d1qapa1
        complexed with pht, so4
  4. 1575550Thermus thermophilus HB8 [TaxId:300852] [225063] (1 PDB entry)
  5. 1575554Vibrio cholerae [TaxId:243277] [226021] (2 PDB entries)
    1. Domains for 3paj:
      1. 1575556Domain d3paja2: 3paj A:129-296 [214737]
        Other proteins in same PDB: d3paja1, d3pajb1
        automated match to d1qapa1
        complexed with mg
      2. 1575557Domain d3pajb2: 3paj B:129-294 [214739]
        Other proteins in same PDB: d3paja1, d3pajb1
        automated match to d1qapa1
        complexed with mg
    2. Domain for 4hl7:
  6. 1575558Yersinia pestis [TaxId:214092] [225973] (1 PDB entry)

More info for Protein automated matches from c.1.17.0: automated matches

Timeline for Protein automated matches from c.1.17.0: automated matches: