Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1715731Class a: All alpha proteins [46456] (286 folds)
  3. 1730937Fold a.27: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases [47322] (1 superfamily)
    core: 4 helices; bundle; one loop crosses over one side of the bundle
  4. 1730938Superfamily a.27.1: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases [47323] (2 families) (S)
  5. 1730991Family a.27.1.0: automated matches [227164] (1 protein)
    not a true family
  6. 1730992Protein automated matches [226872] (8 species)
    not a true protein

Species:

  1. 1730993Aquifex aeolicus [TaxId:63363] [230623] (2 PDB entries)
    1. Domains for 2csx:
      1. 1730996Domain d2csxa2: 2csx A:347-497 [230625]
        Other proteins in same PDB: d2csxa1, d2csxb1
        automated match to d2d5ba1
        protein/RNA complex
      2. 1730997Domain d2csxb2: 2csx B:347-497 [230626]
        Other proteins in same PDB: d2csxa1, d2csxb1
        automated match to d2d5ba1
        protein/RNA complex
    2. Domains for 2ct8:
      1. 1730994Domain d2ct8a2: 2ct8 A:347-497 [241485]
        Other proteins in same PDB: d2ct8a1, d2ct8b1
        automated match to d2csxa2
        protein/RNA complex; complexed with msp
      2. 1730995Domain d2ct8b2: 2ct8 B:347-497 [241487]
        Other proteins in same PDB: d2ct8a1, d2ct8b1
        automated match to d2csxa2
        protein/RNA complex; complexed with msp
  2. 1730998Coxiella burnetii [TaxId:777] [226214] (1 PDB entry)
  3. 1731000Leishmania major [TaxId:5664] [267847] (1 PDB entry)
  4. 1731002Mycobacterium smegmatis [TaxId:246196] [231531] (2 PDB entries)
    1. Domains for 2x1l:
      1. 1731003Domain d2x1la2: 2x1l A:354-512 [231532]
        Other proteins in same PDB: d2x1la1
        automated match to d4eg3b2
        protein/RNA complex; complexed with 2hp, adn, cxs, met
      2. 1731004Domain d2x1lb1: 2x1l B:354-512 [231533]
        Other proteins in same PDB: d2x1la1
        automated match to d4eg3b2
        protein/RNA complex; complexed with 2hp, adn, cxs, met
      3. 1731005Domain d2x1lc1: 2x1l C:354-513 [231534]
        Other proteins in same PDB: d2x1la1
        automated match to d4eg3b2
        protein/RNA complex; complexed with 2hp, adn, cxs, met
    2. Domain for 2x1m:
  5. 1731007Thermus thermophilus HB8 [TaxId:300852] [233868] (1 PDB entry)
  6. 1731009Thermus thermophilus [TaxId:274] [254947] (3 PDB entries)
    1. Domain for 1woy:
    2. Domain for 2d54:
    3. Domain for 2d5b:
  7. 1731013Trypanosoma brucei [TaxId:999953] [226468] (9 PDB entries)
    1. Domains for 4eg1:
      1. 1731022Domain d4eg1a2: 4eg1 A:607-767 [262695]
        Other proteins in same PDB: d4eg1a1, d4eg1b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with gol, met
      2. 1731023Domain d4eg1b2: 4eg1 B:607-768 [220471]
        Other proteins in same PDB: d4eg1a1, d4eg1b1
        automated match to d1rqga1
        protein/RNA complex; complexed with gol, met
    2. Domains for 4eg3:
      1. 1731024Domain d4eg3a2: 4eg3 A:607-767 [262697]
        Other proteins in same PDB: d4eg3a1, d4eg3b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with gol, me8
      2. 1731025Domain d4eg3b2: 4eg3 B:607-768 [220489]
        Other proteins in same PDB: d4eg3a1, d4eg3b1
        automated match to d1rqga1
        protein/RNA complex; complexed with gol, me8
    3. Domains for 4eg4:
      1. 1731026Domain d4eg4a2: 4eg4 A:607-768 [266180]
        Other proteins in same PDB: d4eg4a1, d4eg4b1
        automated match to d4eg8b2
        protein/RNA complex; complexed with 0ot, dms, gol, met, so4
      2. 1731027Domain d4eg4b2: 4eg4 B:607-767 [266182]
        Other proteins in same PDB: d4eg4a1, d4eg4b1
        automated match to d4eg8b2
        protein/RNA complex; complexed with 0ot, dms, gol, met, so4
    4. Domains for 4eg5:
      1. 1731028Domain d4eg5a2: 4eg5 A:607-767 [266184]
        Other proteins in same PDB: d4eg5a1, d4eg5b1
        automated match to d4eg8b2
        protein/RNA complex; complexed with 0ou, dms, gol, met, so4
      2. 1731029Domain d4eg5b2: 4eg5 B:607-766 [266186]
        Other proteins in same PDB: d4eg5a1, d4eg5b1
        automated match to d4eg8b2
        protein/RNA complex; complexed with 0ou, dms, gol, met, so4
    5. Domains for 4eg6:
      1. 1731020Domain d4eg6a2: 4eg6 A:607-770 [262699]
        Other proteins in same PDB: d4eg6a1, d4eg6b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 0p5, dms, gol, met, so4
      2. 1731021Domain d4eg6b2: 4eg6 B:607-767 [220491]
        Other proteins in same PDB: d4eg6a1, d4eg6b1
        automated match to d1rqga1
        protein/RNA complex; complexed with 0p5, dms, gol, met, so4
    6. Domains for 4eg7:
      1. 1731018Domain d4eg7a2: 4eg7 A:607-768 [266188]
        Other proteins in same PDB: d4eg7a1, d4eg7b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 0p4, dms, gol, met
      2. 1731019Domain d4eg7b2: 4eg7 B:607-767 [266190]
        Other proteins in same PDB: d4eg7a1, d4eg7b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 0p4, dms, gol, met
    7. Domains for 4eg8:
      1. 1731014Domain d4eg8a2: 4eg8 A:607-768 [262701]
        Other proteins in same PDB: d4eg8a1, d4eg8b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 0p6, dms, gol, met
      2. 1731015Domain d4eg8b2: 4eg8 B:607-767 [220493]
        Other proteins in same PDB: d4eg8a1, d4eg8b1
        automated match to d1rqga1
        protein/RNA complex; complexed with 0p6, dms, gol, met
    8. Domains for 4ega:
      1. 1731016Domain d4egaa2: 4ega A:607-768 [220495]
        Other proteins in same PDB: d4egaa1, d4egab1
        automated match to d1rqga1
        protein/RNA complex; complexed with 0p8, dms, gol, met, so4
      2. 1731017Domain d4egab2: 4ega B:607-767 [220497]
        Other proteins in same PDB: d4egaa1, d4egab1
        automated match to d1rqga1
        protein/RNA complex; complexed with 0p8, dms, gol, met, so4
    9. Domain for 4mvw:
  8. 1731031Trypanosome (Trypanosoma brucei) [TaxId:5691] [226413] (15 PDB entries)
    1. Domain for 4mvw:
    2. Domains for 4mvx:
      1. 1731052Domain d4mvxa2: 4mvx A:607-768 [266782]
        Other proteins in same PDB: d4mvxa1, d4mvxb2
        automated match to d4mvyb1
        protein/RNA complex; complexed with c13, dms, gol, met
      2. 1731053Domain d4mvxb1: 4mvx B:607-767 [266783]
        Other proteins in same PDB: d4mvxa1, d4mvxb2
        automated match to d1rqga1
        protein/RNA complex; complexed with c13, dms, gol, met
    3. Domains for 4mvy:
      1. 1731038Domain d4mvya2: 4mvy A:607-768 [266786]
        Other proteins in same PDB: d4mvya1, d4mvyb2
        automated match to d4mvyb1
        protein/RNA complex; complexed with 387, dms, gol, met
      2. 1731039Domain d4mvyb1: 4mvy B:607-767 [266787]
        Other proteins in same PDB: d4mvya1, d4mvyb2
        automated match to d1rqga1
        protein/RNA complex; complexed with 387, dms, gol, met
    4. Domains for 4mw0:
      1. 1731032Domain d4mw0a2: 4mw0 A:607-768 [266790]
        Other proteins in same PDB: d4mw0a1, d4mw0b2
        automated match to d4mvyb1
        protein/RNA complex; complexed with 392, dms, gol, met
      2. 1731033Domain d4mw0b1: 4mw0 B:607-767 [266791]
        Other proteins in same PDB: d4mw0a1, d4mw0b2
        automated match to d3tunb2
        protein/RNA complex; complexed with 392, dms, gol, met
    5. Domains for 4mw1:
      1. 1731044Domain d4mw1a2: 4mw1 A:607-767 [266794]
        Other proteins in same PDB: d4mw1a1, d4mw1b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 44f, dms, gol, met
      2. 1731045Domain d4mw1b2: 4mw1 B:607-767 [266796]
        Other proteins in same PDB: d4mw1a1, d4mw1b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 44f, dms, gol, met
    6. Domains for 4mw2:
      1. 1731042Domain d4mw2a2: 4mw2 A:607-768 [266798]
        Other proteins in same PDB: d4mw2a1, d4mw2b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2e9, dms, gol, met, so4
      2. 1731043Domain d4mw2b2: 4mw2 B:607-767 [266800]
        Other proteins in same PDB: d4mw2a1, d4mw2b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2e9, dms, gol, met, so4
    7. Domains for 4mw4:
      1. 1731050Domain d4mw4a2: 4mw4 A:607-767 [266802]
        Other proteins in same PDB: d4mw4a1, d4mw4b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2eb, dms, gol, met, so4
      2. 1731051Domain d4mw4b2: 4mw4 B:607-767 [266804]
        Other proteins in same PDB: d4mw4a1, d4mw4b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2eb, dms, gol, met, so4
    8. Domains for 4mw5:
      1. 1731040Domain d4mw5a2: 4mw5 A:607-768 [266806]
        Other proteins in same PDB: d4mw5a1, d4mw5b2
        automated match to d4mvyb1
        protein/RNA complex; complexed with 415, dms, gol, met, so4
      2. 1731041Domain d4mw5b1: 4mw5 B:607-767 [266807]
        Other proteins in same PDB: d4mw5a1, d4mw5b2
        automated match to d1rqga1
        protein/RNA complex; complexed with 415, dms, gol, met, so4
    9. Domains for 4mw6:
      1. 1731054Domain d4mw6a2: 4mw6 A:607-768 [266810]
        Other proteins in same PDB: d4mw6a1, d4mw6b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2ee, dms, gol, met
      2. 1731055Domain d4mw6b2: 4mw6 B:607-767 [266812]
        Other proteins in same PDB: d4mw6a1, d4mw6b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2ee, dms, gol, met
    10. Domains for 4mw7:
      1. 1731056Domain d4mw7a2: 4mw7 A:607-767 [266814]
        Other proteins in same PDB: d4mw7a1, d4mw7b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2ef, dms, gol, met, so4
      2. 1731057Domain d4mw7b2: 4mw7 B:607-767 [266816]
        Other proteins in same PDB: d4mw7a1, d4mw7b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2ef, dms, gol, met, so4
    11. Domains for 4mw9:
      1. 1731048Domain d4mw9a2: 4mw9 A:607-768 [266818]
        Other proteins in same PDB: d4mw9a1, d4mw9b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2ej, dms, gol, met, so4
      2. 1731049Domain d4mw9b2: 4mw9 B:607-767 [266820]
        Other proteins in same PDB: d4mw9a1, d4mw9b1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2ej, dms, gol, met, so4
    12. Domains for 4mwb:
      1. 1731036Domain d4mwba2: 4mwb A:607-768 [266822]
        Other proteins in same PDB: d4mwba1, d4mwbb1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2ek, dms, gol, met, so4
      2. 1731037Domain d4mwbb2: 4mwb B:607-767 [266824]
        Other proteins in same PDB: d4mwba1, d4mwbb1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2ek, dms, gol, met, so4
    13. Domains for 4mwc:
      1. 1731058Domain d4mwca2: 4mwc A:607-768 [266826]
        Other proteins in same PDB: d4mwca1, d4mwcb1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2em, dms, gol, met, so4
      2. 1731059Domain d4mwcb2: 4mwc B:607-767 [266828]
        Other proteins in same PDB: d4mwca1, d4mwcb1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2em, dms, gol, met, so4
    14. Domains for 4mwd:
      1. 1731034Domain d4mwda2: 4mwd A:607-768 [266830]
        Other proteins in same PDB: d4mwda1, d4mwdb1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 43e, acp, dms, gol, met, so4
      2. 1731035Domain d4mwdb2: 4mwd B:607-767 [266832]
        Other proteins in same PDB: d4mwda1, d4mwdb1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 43e, acp, dms, gol, met, so4
    15. Domains for 4mwe:
      1. 1731046Domain d4mwea2: 4mwe A:607-768 [266834]
        Other proteins in same PDB: d4mwea1, d4mweb1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2en, dms, gol, met, so4
      2. 1731047Domain d4mweb2: 4mwe B:607-767 [266836]
        Other proteins in same PDB: d4mwea1, d4mweb1
        automated match to d4mvyb1
        protein/RNA complex; complexed with 2en, dms, gol, met, so4

More info for Protein automated matches from a.27.1.0: automated matches

Timeline for Protein automated matches from a.27.1.0: automated matches: