Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1473060Class a: All alpha proteins [46456] (285 folds)
  3. 1487290Fold a.27: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases [47322] (1 superfamily)
    core: 4 helices; bundle; one loop crosses over one side of the bundle
  4. 1487291Superfamily a.27.1: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases [47323] (2 families) (S)
  5. 1487344Family a.27.1.0: automated matches [227164] (1 protein)
    not a true family
  6. 1487345Protein automated matches [226872] (7 species)
    not a true protein

Species:

  1. 1487346Aquifex aeolicus [TaxId:63363] [230623] (2 PDB entries)
    1. Domains for 2csx:
      1. 1487349Domain d2csxa2: 2csx A:347-497 [230625]
        Other proteins in same PDB: d2csxa1, d2csxb1
        automated match to d2d5ba1
        protein/RNA complex
      2. 1487350Domain d2csxb2: 2csx B:347-497 [230626]
        Other proteins in same PDB: d2csxa1, d2csxb1
        automated match to d2d5ba1
        protein/RNA complex
    2. Domains for 2ct8:
      1. 1487347Domain d2ct8a2: 2ct8 A:347-497 [241485]
        Other proteins in same PDB: d2ct8a1, d2ct8b1
        automated match to d2csxa2
        protein/RNA complex; complexed with msp
      2. 1487348Domain d2ct8b2: 2ct8 B:347-497 [241487]
        Other proteins in same PDB: d2ct8a1, d2ct8b1
        automated match to d2csxa2
        protein/RNA complex; complexed with msp
  2. 1487351Coxiella burnetii [TaxId:777] [226214] (1 PDB entry)
  3. 1487353Mycobacterium smegmatis [TaxId:246196] [231531] (2 PDB entries)
    1. Domains for 2x1l:
      1. 1487354Domain d2x1la2: 2x1l A:354-512 [231532]
        Other proteins in same PDB: d2x1la1
        automated match to d4eg3b2
        protein/RNA complex; complexed with 2hp, adn, cxs, met
      2. 1487355Domain d2x1lb1: 2x1l B:354-512 [231533]
        Other proteins in same PDB: d2x1la1
        automated match to d4eg3b2
        protein/RNA complex; complexed with 2hp, adn, cxs, met
      3. 1487356Domain d2x1lc1: 2x1l C:354-513 [231534]
        Other proteins in same PDB: d2x1la1
        automated match to d4eg3b2
        protein/RNA complex; complexed with 2hp, adn, cxs, met
    2. Domain for 2x1m:
  4. 1487358Thermus thermophilus HB8 [TaxId:300852] [233868] (1 PDB entry)
  5. 1487360Thermus thermophilus [TaxId:274] [254947] (3 PDB entries)
    1. Domain for 1woy:
    2. Domain for 2d54:
    3. Domain for 2d5b:
  6. 1487364Trypanosoma brucei [TaxId:999953] [226468] (6 PDB entries)
    1. Domain for 4eg1:
    2. Domain for 4eg3:
    3. Domain for 4eg6:
    4. Domain for 4eg8:
    5. Domains for 4ega:
      1. 1487366Domain d4egaa2: 4ega A:607-768 [220495]
        Other proteins in same PDB: d4egaa1, d4egab1
        automated match to d1rqga1
        protein/RNA complex; complexed with 0p8, dms, gol, met, so4
      2. 1487367Domain d4egab2: 4ega B:607-767 [220497]
        Other proteins in same PDB: d4egaa1, d4egab1
        automated match to d1rqga1
        protein/RNA complex; complexed with 0p8, dms, gol, met, so4
    6. Domain for 4mvw:
  7. 1487372Trypanosome (Trypanosoma brucei) [TaxId:5691] [226413] (4 PDB entries)
    1. Domain for 3tun:
    2. Domain for 3u1e:
    3. Domain for 3u1f:
    4. Domain for 3u1g:

More info for Protein automated matches from a.27.1.0: automated matches

Timeline for Protein automated matches from a.27.1.0: automated matches: