Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2916469Fold c.95: Thiolase-like [53900] (1 superfamily)
    consists of two similar domains related by pseudo dyad; duplication
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32451; strand 5 is antiparallel to the rest
  4. 2916470Superfamily c.95.1: Thiolase-like [53901] (3 families) (S)
  5. 2916987Family c.95.1.2: Chalcone synthase-like [53914] (15 proteins)
  6. 2917278Protein automated matches [226868] (6 species)
    not a true protein

Species:

  1. 2917279Apple (Malus domestica) [TaxId:3750] [342829] (1 PDB entry)
  2. 2917282Freesia hybrid [TaxId:867926] [261021] (1 PDB entry)
  3. 2917287Peanut (Arachis hypogaea) [TaxId:3818] [225011] (2 PDB entries)
    1. Domain for 1z1e:
    2. Domain for 1z1f:
  4. 2917290Scots pine (Pinus sylvestris) [TaxId:3349] [358851] (1 PDB entry)
  5. 2917293Soybean (Glycine max) [TaxId:3847] [389663] (2 PDB entries)
    1. Domains for 7bur:
      1. 2917294Domain d7bura1: 7bur A:1-234 [389714]
        Other proteins in same PDB: d7burb3
        automated match to d1cmla1
        complexed with cit, csd, nar
      2. 2917295Domain d7bura2: 7bur A:235-388 [389715]
        Other proteins in same PDB: d7burb3
        automated match to d1bi5a2
        complexed with cit, csd, nar
      3. 2917296Domain d7burb1: 7bur B:1-234 [389664]
        Other proteins in same PDB: d7burb3
        automated match to d1cmla1
        complexed with cit, csd, nar
      4. 2917297Domain d7burb2: 7bur B:235-388 [389665]
        Other proteins in same PDB: d7burb3
        automated match to d1bi5a2
        complexed with cit, csd, nar
    2. Domains for 7bus:
      1. 2917298Domain d7busa1: 7bus A:1-234 [389690]
        Other proteins in same PDB: d7busa3, d7busb3
        automated match to d1cmla1
        complexed with csd
      2. 2917299Domain d7busa2: 7bus A:235-388 [389691]
        Other proteins in same PDB: d7busa3, d7busb3
        automated match to d1bi5a2
        complexed with csd
      3. 2917300Domain d7busb1: 7bus B:1-234 [389697]
        Other proteins in same PDB: d7busa3, d7busb3
        automated match to d1cmla1
        complexed with csd
      4. 2917301Domain d7busb2: 7bus B:235-388 [389698]
        Other proteins in same PDB: d7busa3, d7busb3
        automated match to d1bi5a2
        complexed with csd
  6. 2917302Thale cress (Arabidopsis thaliana) [TaxId:3702] [358856] (3 PDB entries)
    1. Domains for 6dxb:
      1. 2917303Domain d6dxba1: 6dxb A:7-241 [358949]
        automated match to d1cmla1
        complexed with csd
      2. 2917304Domain d6dxba2: 6dxb A:242-395 [358950]
        automated match to d1bi5a2
        complexed with csd
      3. 2917305Domain d6dxbb1: 6dxb B:7-241 [358857]
        automated match to d1cmla1
        complexed with csd
      4. 2917306Domain d6dxbb2: 6dxb B:242-395 [358858]
        automated match to d1bi5a2
        complexed with csd
      5. 2917307Domain d6dxbc1: 6dxb C:8-241 [358866]
        automated match to d1cmla1
        complexed with csd
      6. 2917308Domain d6dxbc2: 6dxb C:242-395 [358867]
        automated match to d1bi5a2
        complexed with csd
      7. 2917309Domain d6dxbd1: 6dxb D:8-241 [358978]
        automated match to d1cmla1
        complexed with csd
      8. 2917310Domain d6dxbd2: 6dxb D:242-395 [358979]
        automated match to d1bi5a2
        complexed with csd
    2. Domains for 6dxd:
      1. 2917311Domain d6dxda1: 6dxd A:7-241 [358886]
        automated match to d1cmla1
        complexed with csd; mutant
      2. 2917312Domain d6dxda2: 6dxd A:242-395 [358887]
        automated match to d1bi5a2
        complexed with csd; mutant
      3. 2917313Domain d6dxdb1: 6dxd B:7-241 [358897]
        automated match to d1cmla1
        complexed with csd; mutant
      4. 2917314Domain d6dxdb2: 6dxd B:242-395 [358898]
        automated match to d1bi5a2
        complexed with csd; mutant
      5. 2917315Domain d6dxdc1: 6dxd C:7-241 [358888]
        automated match to d1cmla1
        complexed with csd; mutant
      6. 2917316Domain d6dxdc2: 6dxd C:242-395 [358889]
        automated match to d1bi5a2
        complexed with csd; mutant
      7. 2917317Domain d6dxdd1: 6dxd D:7-241 [358902]
        automated match to d1cmla1
        complexed with csd; mutant
      8. 2917318Domain d6dxdd2: 6dxd D:242-395 [358903]
        automated match to d1bi5a2
        complexed with csd; mutant
    3. Domains for 6dxe:
      1. 2917319Domain d6dxea1: 6dxe A:7-241 [358906]
        automated match to d1cmla1
        complexed with cso; mutant
      2. 2917320Domain d6dxea2: 6dxe A:242-395 [358907]
        automated match to d1bi5a2
        complexed with cso; mutant
      3. 2917321Domain d6dxec1: 6dxe C:7-241 [358893]
        automated match to d1cmla1
        complexed with cso; mutant
      4. 2917322Domain d6dxec2: 6dxe C:242-395 [358894]
        automated match to d1bi5a2
        complexed with cso; mutant

More info for Protein automated matches from c.95.1.2: Chalcone synthase-like

Timeline for Protein automated matches from c.95.1.2: Chalcone synthase-like: