Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1429695Fold d.122: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase [55873] (1 superfamily)
    8-stranded mixed beta-sheet; 2 layers: alpha/beta
  4. 1429696Superfamily d.122.1: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase [55874] (5 families) (S)
  5. 1430131Family d.122.1.0: automated matches [227160] (1 protein)
    not a true family
  6. 1430132Protein automated matches [226867] (10 species)
    not a true protein

Species:

  1. 1430133Enterococcus faecalis [TaxId:226185] [226590] (9 PDB entries)
    1. Domain for 4gee:
    2. Domain for 4gfn:
    3. Domain for 4ggl:
    4. Domain for 4hxw:
    5. Domains for 4hz5:
      1. 1430142Domain d4hz5a_: 4hz5 A: [222804]
        automated match to d1kzna_
        complexed with 19y
      2. 1430143Domain d4hz5b_: 4hz5 B: [222805]
        automated match to d1kzna_
        complexed with 19y
      3. 1430144Domain d4hz5c_: 4hz5 C: [222806]
        automated match to d1kzna_
        complexed with 19y
      4. 1430145Domain d4hz5d_: 4hz5 D: [222807]
        automated match to d1kzna_
        complexed with 19y
      5. 1430146Domain d4hz5e_: 4hz5 E: [222808]
        automated match to d1kzna_
        complexed with 19y
      6. 1430147Domain d4hz5f_: 4hz5 F: [222809]
        automated match to d1kzna_
        complexed with 19y
      7. 1430148Domain d4hz5g_: 4hz5 G: [222810]
        automated match to d1kzna_
        complexed with 19y
      8. 1430149Domain d4hz5h_: 4hz5 H: [222811]
        automated match to d1kzna_
        complexed with 19y
      9. 1430150Domain d4hz5j_: 4hz5 J: [222812]
        automated match to d1kzna_
        complexed with 19y
    6. Domain for 4k4o:
    7. Domain for 4ksg:
    8. Domain for 4ksh:
    9. Domain for 4ktn:
  2. 1430151Escherichia coli [TaxId:562] [225182] (1 PDB entry)
  3. 1430153Escherichia coli [TaxId:83333] [225819] (2 PDB entries)
    1. Domains for 3fv5:
      1. 1430154Domain d3fv5a_: 3fv5 A: [210195]
        automated match to d1aj6a_
        complexed with 1eu
      2. 1430155Domain d3fv5b_: 3fv5 B: [210196]
        automated match to d1aj6a_
        complexed with 1eu
    2. Domains for 4hz0:
      1. 1430156Domain d4hz0a_: 4hz0 A: [222802]
        automated match to d1kzna_
        complexed with 1av, mg
      2. 1430157Domain d4hz0b_: 4hz0 B: [222803]
        automated match to d1kzna_
        complexed with 1av, mg
  4. 1430158Francisella tularensis [TaxId:376619] [226591] (4 PDB entries)
    1. Domains for 4hxz:
      1. 1430163Domain d4hxza1: 4hxz A:8-215 [222784]
        Other proteins in same PDB: d4hxza2
        automated match to d1s16a2
        complexed with 19y
      2. 1430164Domain d4hxzb1: 4hxz B:7-215 [222786]
        Other proteins in same PDB: d4hxza2
        automated match to d1s16a2
        complexed with 19y
    2. Domains for 4hy1:
      1. 1430161Domain d4hy1a1: 4hy1 A:7-215 [222787]
        Other proteins in same PDB: d4hy1a2
        automated match to d1s16a2
        complexed with 19x
      2. 1430162Domain d4hy1b1: 4hy1 B:8-215 [222789]
        Other proteins in same PDB: d4hy1a2
        automated match to d1s16a2
        complexed with 19x
    3. Domains for 4hym:
      1. 1430159Domain d4hyma1: 4hym A:7-215 [222795]
        Other proteins in same PDB: d4hyma2
        automated match to d1s16a2
        complexed with cjc
      2. 1430160Domain d4hymb1: 4hym B:8-215 [222797]
        Other proteins in same PDB: d4hyma2
        automated match to d1s16a2
        complexed with cjc
    4. Domains for 4kqv:
      1. 1430165Domain d4kqva1: 4kqv A:7-215 [236036]
        Other proteins in same PDB: d4kqva2
        automated match to d4hxza1
        protein/DNA complex; complexed with doo, iod
      2. 1430166Domain d4kqvb_: 4kqv B: [236038]
        Other proteins in same PDB: d4kqva2
        automated match to d4hxza1
        protein/DNA complex; complexed with doo, iod
  5. 1430167Human (Homo sapiens) [TaxId:9606] [225008] (3 PDB entries)
    1. Domains for 1zxm:
      1. 1430170Domain d1zxma1: 1zxm A:29-265 [203366]
        Other proteins in same PDB: d1zxma2, d1zxmb2
        automated match to d1pvgb2
        complexed with anp, mg
      2. 1430171Domain d1zxmb1: 1zxm B:29-265 [203368]
        Other proteins in same PDB: d1zxma2, d1zxmb2
        automated match to d1pvgb2
        complexed with anp, mg
    2. Domains for 1zxn:
      1. 1430172Domain d1zxna1: 1zxn A:29-265 [230471]
        Other proteins in same PDB: d1zxna2, d1zxnb2, d1zxnc2, d1zxnd2
        automated match to d1zxmb1
        complexed with adp, gol, mg, so4
      2. 1430173Domain d1zxnb1: 1zxn B:29-265 [230473]
        Other proteins in same PDB: d1zxna2, d1zxnb2, d1zxnc2, d1zxnd2
        automated match to d1zxmb1
        complexed with adp, gol, mg, so4
      3. 1430174Domain d1zxnc1: 1zxn C:29-265 [230475]
        Other proteins in same PDB: d1zxna2, d1zxnb2, d1zxnc2, d1zxnd2
        automated match to d1zxmb1
        complexed with adp, gol, mg, so4
      4. 1430175Domain d1zxnd1: 1zxn D:29-265 [230477]
        Other proteins in same PDB: d1zxna2, d1zxnb2, d1zxnc2, d1zxnd2
        automated match to d1zxmb1
        complexed with adp, gol, mg, so4
    3. Domains for 2e0a:
      1. 1430168Domain d2e0aa2: 2e0a A:188-386 [230684]
        Other proteins in same PDB: d2e0aa1, d2e0ab1
        automated match to d1jm6a2
        complexed with anp, mg
      2. 1430169Domain d2e0ab2: 2e0a B:188-386 [230682]
        Other proteins in same PDB: d2e0aa1, d2e0ab1
        automated match to d1jm6a2
        complexed with anp, mg
  6. 1430176Mycobacterium smegmatis [TaxId:1772] [228578] (1 PDB entry)
  7. 1430181Myxococcus xanthus [TaxId:246197] [225452] (1 PDB entry)
  8. 1430184Staphylococcus aureus [TaxId:1280] [232247] (2 PDB entries)
    1. Domains for 3g75:
      1. 1430186Domain d3g75a_: 3g75 A: [232249]
        automated match to d4gfna_
        complexed with b48
      2. 1430187Domain d3g75b_: 3g75 B: [232248]
        automated match to d4gfna_
        complexed with b48
    2. Domain for 3ttz:
  9. 1430188Streptococcus pneumoniae [TaxId:760835] [226426] (7 PDB entries)
    1. Domain for 4em7:
    2. Domain for 4emv:
    3. Domain for 4lp0:
    4. Domain for 4lpb:
    5. Domain for 4mb9:
    6. Domain for 4mbc:
    7. Domain for 4mot:
  10. 1430196Xanthomonas oryzae [TaxId:291331] [226075] (2 PDB entries)
    1. Domain for 3lnu:
    2. Domain for 3lps:

More info for Protein automated matches from d.122.1.0: automated matches

Timeline for Protein automated matches from d.122.1.0: automated matches: