Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1629565Fold c.109: PEP carboxykinase N-terminal domain [68922] (1 superfamily)
    contains mixed beta-sheets; topology is partly similar to that of the catalytic C-terminal domain
  4. 1629566Superfamily c.109.1: PEP carboxykinase N-terminal domain [68923] (2 families) (S)
  5. 1629644Family c.109.1.0: automated matches [227144] (1 protein)
    not a true family
  6. 1629645Protein automated matches [226847] (4 species)
    not a true protein

Species:

  1. 1629646Anaerobiospirillum succiniciproducens [TaxId:13335] [230434] (2 PDB entries)
    1. Domains for 1ytm:
      1. 1629647Domain d1ytma1: 1ytm A:2-220 [230435]
        Other proteins in same PDB: d1ytma2, d1ytmb2
        automated match to d1os1a2
        complexed with atp, mg, mn, oxd
      2. 1629648Domain d1ytmb1: 1ytm B:1002-1220 [230438]
        Other proteins in same PDB: d1ytma2, d1ytmb2
        automated match to d1os1a2
        complexed with atp, mg, mn, oxd
    2. Domains for 1yvy:
      1. 1629649Domain d1yvya1: 1yvy A:2-220 [241074]
        Other proteins in same PDB: d1yvya2, d1yvyb2
        automated match to d1ytma1
      2. 1629650Domain d1yvyb1: 1yvy B:1002-1220 [241076]
        Other proteins in same PDB: d1yvya2, d1yvyb2
        automated match to d1ytma1
  2. 1629651Chicken (Gallus gallus) [TaxId:9031] [225083] (3 PDB entries)
    1. Domains for 2faf:
      1. 1629652Domain d2fafa1: 2faf A:34-278 [204176]
        Other proteins in same PDB: d2fafa2, d2fafb2
        automated match to d1khba2
        complexed with 1pe, 20s, epe, mn
      2. 1629653Domain d2fafb1: 2faf B:34-278 [204178]
        Other proteins in same PDB: d2fafa2, d2fafb2
        automated match to d1khba2
        complexed with 1pe, 20s, epe, mn
    2. Domains for 2fah:
      1. 1629656Domain d2faha1: 2fah A:34-278 [204180]
        Other proteins in same PDB: d2faha2, d2fahb2, d2fahc2, d2fahd2
        automated match to d1khba2
        complexed with 20s, gdp, mla, mn
      2. 1629657Domain d2fahb1: 2fah B:34-278 [204182]
        Other proteins in same PDB: d2faha2, d2fahb2, d2fahc2, d2fahd2
        automated match to d1khba2
        complexed with 20s, gdp, mla, mn
      3. 1629658Domain d2fahc1: 2fah C:34-278 [204184]
        Other proteins in same PDB: d2faha2, d2fahb2, d2fahc2, d2fahd2
        automated match to d1khba2
        complexed with 20s, gdp, mla, mn
      4. 1629659Domain d2fahd1: 2fah D:34-278 [204186]
        Other proteins in same PDB: d2faha2, d2fahb2, d2fahc2, d2fahd2
        automated match to d1khba2
        complexed with 20s, gdp, mla, mn
    3. Domains for 2qzy:
      1. 1629654Domain d2qzya1: 2qzy A:34-278 [205916]
        Other proteins in same PDB: d2qzya2, d2qzyb2
        automated match to d1khba2
        complexed with 20s, epe, mn, pep
      2. 1629655Domain d2qzyb1: 2qzy B:34-278 [205918]
        Other proteins in same PDB: d2qzya2, d2qzyb2
        automated match to d1khba2
        complexed with 20s, epe, mn, pep
  3. 1629660Corynebacterium glutamicum [TaxId:1718] [225441] (1 PDB entry)
  4. 1629665Mycobacterium tuberculosis [TaxId:419947] [260615] (2 PDB entries)
    1. Domain for 4wie:
    2. Domain for 4wiu:

More info for Protein automated matches from c.109.1.0: automated matches

Timeline for Protein automated matches from c.109.1.0: automated matches: