Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2491927Fold c.109: PEP carboxykinase N-terminal domain [68922] (1 superfamily)
    contains mixed beta-sheets; topology is partly similar to that of the catalytic C-terminal domain
  4. 2491928Superfamily c.109.1: PEP carboxykinase N-terminal domain [68923] (2 families) (S)
  5. 2492024Family c.109.1.0: automated matches [227144] (1 protein)
    not a true family
  6. 2492025Protein automated matches [226847] (5 species)
    not a true protein

Species:

  1. 2492026Anaerobiospirillum succiniciproducens [TaxId:13335] [230434] (2 PDB entries)
    1. Domains for 1ytm:
      1. 2492027Domain d1ytma1: 1ytm A:2-220 [230435]
        Other proteins in same PDB: d1ytma2, d1ytmb2
        automated match to d1os1a2
        complexed with atp, mg, mn, oxd
      2. 2492028Domain d1ytmb1: 1ytm B:1002-1220 [230438]
        Other proteins in same PDB: d1ytma2, d1ytmb2
        automated match to d1os1a2
        complexed with atp, mg, mn, oxd
    2. Domains for 1yvy:
      1. 2492029Domain d1yvya1: 1yvy A:2-220 [241074]
        Other proteins in same PDB: d1yvya2, d1yvyb2
        automated match to d1ytma1
      2. 2492030Domain d1yvyb1: 1yvy B:1002-1220 [241076]
        Other proteins in same PDB: d1yvya2, d1yvyb2
        automated match to d1ytma1
  2. 2492031Chicken (Gallus gallus) [TaxId:9031] [225083] (4 PDB entries)
    1. Domains for 2faf:
      1. 2492034Domain d2fafa1: 2faf A:34-278 [204176]
        Other proteins in same PDB: d2fafa2, d2fafb2
        automated match to d1khba2
        complexed with 1pe, 20s, epe, mn
      2. 2492035Domain d2fafb1: 2faf B:34-278 [204178]
        Other proteins in same PDB: d2fafa2, d2fafb2
        automated match to d1khba2
        complexed with 1pe, 20s, epe, mn
    2. Domains for 2fag:
      1. 2492032Domain d2faga1: 2fag A:34-278 [303810]
        Other proteins in same PDB: d2faga2, d2fagb2
        automated match to d2zcid1
        complexed with 20s, epe, mn, pep
      2. 2492033Domain d2fagb1: 2fag B:34-278 [303812]
        Other proteins in same PDB: d2faga2, d2fagb2
        automated match to d2zcid1
        complexed with 20s, epe, mn, pep
    3. Domains for 2fah:
      1. 2492038Domain d2faha1: 2fah A:34-278 [204180]
        Other proteins in same PDB: d2faha2, d2fahb2, d2fahc2, d2fahd2
        automated match to d1khba2
        complexed with 20s, gdp, mla, mn
      2. 2492039Domain d2fahb1: 2fah B:34-278 [204182]
        Other proteins in same PDB: d2faha2, d2fahb2, d2fahc2, d2fahd2
        automated match to d1khba2
        complexed with 20s, gdp, mla, mn
      3. 2492040Domain d2fahc1: 2fah C:34-278 [204184]
        Other proteins in same PDB: d2faha2, d2fahb2, d2fahc2, d2fahd2
        automated match to d1khba2
        complexed with 20s, gdp, mla, mn
      4. 2492041Domain d2fahd1: 2fah D:34-278 [204186]
        Other proteins in same PDB: d2faha2, d2fahb2, d2fahc2, d2fahd2
        automated match to d1khba2
        complexed with 20s, gdp, mla, mn
    4. Domains for 2qzy:
      1. 2492036Domain d2qzya1: 2qzy A:34-278 [205916]
        Other proteins in same PDB: d2qzya2, d2qzyb2
        automated match to d1khba2
        complexed with 20s, epe, mn, pep
      2. 2492037Domain d2qzyb1: 2qzy B:34-278 [205918]
        Other proteins in same PDB: d2qzya2, d2qzyb2
        automated match to d1khba2
        complexed with 20s, epe, mn, pep
  3. 2492042Corynebacterium glutamicum [TaxId:1718] [225441] (1 PDB entry)
  4. 2492047Mycobacterium tuberculosis [TaxId:419947] [260615] (8 PDB entries)
    1. Domain for 4wie:
    2. Domain for 4wiu:
    3. Domain for 4wl8:
    4. Domain for 4wou:
    5. Domain for 4wpt:
    6. Domain for 4wpu:
    7. Domain for 4wpv:
    8. Domain for 5i67:
  5. 2492056Mycobacterium tuberculosis [TaxId:83332] [271217] (3 PDB entries)
    1. Domain for 4r43:
    2. Domain for 4rcg:
    3. Domain for 4rij:

More info for Protein automated matches from c.109.1.0: automated matches

Timeline for Protein automated matches from c.109.1.0: automated matches: