Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2250849Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2253242Fold f.20: Clc chloride channel [81341] (1 superfamily)
    core: 18 transmembrane helices
  4. 2253243Superfamily f.20.1: Clc chloride channel [81340] (1 family) (S)
  5. 2253244Family f.20.1.1: Clc chloride channel [69912] (2 proteins)
    duplication: consist of two similar structural parts
  6. 2253292Protein automated matches [226846] (4 species)
    not a true protein

Species:

  1. 2253293Escherichia coli K-12 [TaxId:83333] [224947] (13 PDB entries)
    1. Domains for 3det:
      1. 2253312Domain d3deta_: 3det A: [239210]
        Other proteins in same PDB: d3detd1, d3detd2, d3detf1, d3detf2
        automated match to d1kpla_
        mutant
      2. 2253313Domain d3detb_: 3det B: [239211]
        Other proteins in same PDB: d3detd1, d3detd2, d3detf1, d3detf2
        automated match to d1kpla_
        mutant
    2. Domains for 4ene:
      1. 2253294Domain d4enea_: 4ene A: [220679]
        Other proteins in same PDB: d4enec1, d4enec2, d4ened1, d4ened2, d4enee1, d4enee2, d4enef1, d4enef2
        automated match to d1kpla_
        complexed with cl, dmu, mal
      2. 2253295Domain d4eneb_: 4ene B: [220680]
        Other proteins in same PDB: d4enec1, d4enec2, d4ened1, d4ened2, d4enee1, d4enee2, d4enef1, d4enef2
        automated match to d1kpla_
        complexed with cl, dmu, mal
    3. Domains for 4kjq:
      1. 2253300Domain d4kjqa_: 4kjq A: [224310]
        Other proteins in same PDB: d4kjqc1, d4kjqc2, d4kjqd1, d4kjqd2, d4kjqe1, d4kjqe2, d4kjqf1, d4kjqf2
        automated match to d1kpla_
        complexed with f
      2. 2253301Domain d4kjqb_: 4kjq B: [224311]
        Other proteins in same PDB: d4kjqc1, d4kjqc2, d4kjqd1, d4kjqd2, d4kjqe1, d4kjqe2, d4kjqf1, d4kjqf2
        automated match to d1kpla_
        complexed with f
    4. Domains for 4kjw:
      1. 2253306Domain d4kjwa_: 4kjw A: [253268]
        Other proteins in same PDB: d4kjwd1, d4kjwd2, d4kjwf1, d4kjwf2
        automated match to d1kpla_
      2. 2253307Domain d4kjwb_: 4kjw B: [253269]
        Other proteins in same PDB: d4kjwd1, d4kjwd2, d4kjwf1, d4kjwf2
        automated match to d1kpla_
    5. Domains for 4kk5:
      1. 2253314Domain d4kk5a_: 4kk5 A: [253276]
        Other proteins in same PDB: d4kk5d1, d4kk5d2, d4kk5f1, d4kk5f2
        automated match to d1kpla_
      2. 2253315Domain d4kk5b_: 4kk5 B: [253277]
        Other proteins in same PDB: d4kk5d1, d4kk5d2, d4kk5f1, d4kk5f2
        automated match to d1kpla_
    6. Domains for 4kk6:
      1. 2253318Domain d4kk6a_: 4kk6 A: [253282]
        Other proteins in same PDB: d4kk6d1, d4kk6d2, d4kk6f1, d4kk6f2
        automated match to d1kpla_
        complexed with br
      2. 2253319Domain d4kk6b_: 4kk6 B: [253283]
        Other proteins in same PDB: d4kk6d1, d4kk6d2, d4kk6f1, d4kk6f2
        automated match to d1kpla_
        complexed with br
    7. Domains for 4kk8:
      1. 2253298Domain d4kk8a_: 4kk8 A: [224324]
        Other proteins in same PDB: d4kk8c1, d4kk8c2, d4kk8d1, d4kk8d2, d4kk8e1, d4kk8e2, d4kk8f1, d4kk8f2
        automated match to d1kpla_
        complexed with f; mutant
      2. 2253299Domain d4kk8b_: 4kk8 B: [224325]
        Other proteins in same PDB: d4kk8c1, d4kk8c2, d4kk8d1, d4kk8d2, d4kk8e1, d4kk8e2, d4kk8f1, d4kk8f2
        automated match to d1kpla_
        complexed with f; mutant
    8. Domains for 4kk9:
      1. 2253302Domain d4kk9a_: 4kk9 A: [253288]
        Other proteins in same PDB: d4kk9d1, d4kk9d2, d4kk9f1, d4kk9f2
        automated match to d1kpla_
        mutant
      2. 2253303Domain d4kk9b_: 4kk9 B: [253289]
        Other proteins in same PDB: d4kk9d1, d4kk9d2, d4kk9f1, d4kk9f2
        automated match to d1kpla_
        mutant
    9. Domains for 4kka:
      1. 2253304Domain d4kkaa_: 4kka A: [253294]
        Other proteins in same PDB: d4kkad1, d4kkad2, d4kkaf1, d4kkaf2
        automated match to d1kpla_
        mutant
      2. 2253305Domain d4kkab_: 4kka B: [253295]
        Other proteins in same PDB: d4kkad1, d4kkad2, d4kkaf1, d4kkaf2
        automated match to d1kpla_
        mutant
    10. Domains for 4kkb:
      1. 2253310Domain d4kkba_: 4kkb A: [253300]
        Other proteins in same PDB: d4kkbd1, d4kkbd2, d4kkbf1, d4kkbf2
        automated match to d1kpla_
        mutant
      2. 2253311Domain d4kkbb_: 4kkb B: [253301]
        Other proteins in same PDB: d4kkbd1, d4kkbd2, d4kkbf1, d4kkbf2
        automated match to d1kpla_
        mutant
    11. Domains for 4kkc:
      1. 2253316Domain d4kkca_: 4kkc A: [253306]
        Other proteins in same PDB: d4kkcd1, d4kkcd2, d4kkcf1, d4kkcf2
        automated match to d1kpla_
        mutant
      2. 2253317Domain d4kkcb_: 4kkc B: [253307]
        Other proteins in same PDB: d4kkcd1, d4kkcd2, d4kkcf1, d4kkcf2
        automated match to d1kpla_
        mutant
    12. Domains for 4kkl:
      1. 2253308Domain d4kkla_: 4kkl A: [224334]
        Other proteins in same PDB: d4kklc1, d4kklc2, d4kkld1, d4kkld2, d4kkle1, d4kkle2, d4kklf1, d4kklf2
        automated match to d1kpla_
        complexed with f; mutant
      2. 2253309Domain d4kklb_: 4kkl B: [224335]
        Other proteins in same PDB: d4kklc1, d4kklc2, d4kkld1, d4kkld2, d4kkle1, d4kkle2, d4kklf1, d4kklf2
        automated match to d1kpla_
        complexed with f; mutant
    13. Domains for 4lou:
      1. 2253296Domain d4loua_: 4lou A: [224733]
        Other proteins in same PDB: d4louc1, d4louc2, d4loud1, d4loud2, d4loue1, d4loue2, d4louf1, d4louf2
        automated match to d1kpla_
        mutant
      2. 2253297Domain d4loub_: 4lou B: [224734]
        Other proteins in same PDB: d4louc1, d4louc2, d4loud1, d4loud2, d4loue1, d4loue2, d4louf1, d4louf2
        automated match to d1kpla_
        mutant
  2. 2253320Escherichia coli [TaxId:216592] [255982] (2 PDB entries)
    1. Domain for 3nmo:
    2. Domains for 5hd8:
      1. 2253322Domain d5hd8a_: 5hd8 A: [328599]
        Other proteins in same PDB: d5hd8d1, d5hd8d2, d5hd8f1, d5hd8f2
        automated match to d3nmoa_
        complexed with cl
      2. 2253323Domain d5hd8b_: 5hd8 B: [328681]
        Other proteins in same PDB: d5hd8d1, d5hd8d2, d5hd8f1, d5hd8f2
        automated match to d3nmoa_
        complexed with cl
  3. 2253324Escherichia coli [TaxId:562] [255156] (2 PDB entries)
    1. Domains for 2exy:
      1. 2253327Domain d2exya_: 2exy A: [132572]
        Other proteins in same PDB: d2exyd1, d2exyd2, d2exyf1, d2exyf2
        automated match to d1kpla_
        mutant
      2. 2253328Domain d2exyb_: 2exy B: [132573]
        Other proteins in same PDB: d2exyd1, d2exyd2, d2exyf1, d2exyf2
        automated match to d1kpla_
        mutant
    2. Domains for 3ejz:
      1. 2253325Domain d3ejza_: 3ejz A: [239248]
        Other proteins in same PDB: d3ejzd1, d3ejzd2, d3ejzf1, d3ejzf2
        automated match to d1kpla_
        complexed with br; mutant
      2. 2253326Domain d3ejzb_: 3ejz B: [239249]
        Other proteins in same PDB: d3ejzd1, d3ejzd2, d3ejzf1, d3ejzf2
        automated match to d1kpla_
        complexed with br; mutant
  4. 2253329Shigella sonnei [TaxId:300269] [256257] (1 PDB entry)

More info for Protein automated matches from f.20.1.1: Clc chloride channel

Timeline for Protein automated matches from f.20.1.1: Clc chloride channel: