SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class f: Membrane and cell surface proteins and peptides [56835] (57 folds)
Fold f.13: Family A G protein-coupled receptor-like [81322] (1 superfamily)
core: up-and-down bundle of seven transmembrane helices tilted 20 degrees with respect to the plane of the membrane
Superfamily f.13.1: Family A G protein-coupled receptor-like [81321] (3 families)
Family f.13.1.0: automated matches [227143] (1 protein)
not a true family
Protein automated matches [226845] (12 species)
not a true protein

Species:

Exiguobacterium sibiricum [TaxId:332410] [227512] (1 PDB entry)
- Domains for 4hyj:
  1. Domain d4hyja_: 4hyj A: [227513]
    automated match to d1h2sa_
    complexed with lfa, ret
  2. Domain d4hyjb_: 4hyj B: [227514]
    automated match to d1h2sa_
    complexed with lfa, ret
Gamma proteobacterium [TaxId:245185] [256343] (2 PDB entries)
1. Domains for 4kly:
  1. Domain d4klya_: 4kly A: [253336]
    automated match to d4jq6a_
    complexed with ret; mutant
  2. Domain d4klyb_: 4kly B: [253337]
    automated match to d4jq6a_
    complexed with ret; mutant
  3. Domain d4klyc_: 4kly C: [253338]
    automated match to d4jq6a_
    complexed with ret; mutant
  4. Domain d4klyd_: 4kly D: [253339]
    automated match to d4jq6a_
    complexed with ret; mutant
  5. Domain d4klye_: 4kly E: [253340]
    automated match to d4jq6a_
    complexed with ret; mutant
2. Domains for 4knf:
  1. Domain d4knfa_: 4knf A: [253343]
    automated match to d4jq6a_
    complexed with ret; mutant
  2. Domain d4knfb_: 4knf B: [253344]
    automated match to d4jq6a_
    complexed with ret; mutant
  3. Domain d4knfc_: 4knf C: [253345]
    automated match to d4jq6a_
    complexed with ret; mutant
  4. Domain d4knfd_: 4knf D: [253346]
    automated match to d4jq6a_
    complexed with ret; mutant
  5. Domain d4knfe_: 4knf E: [253347]
    automated match to d4jq6a_
    complexed with ret; mutant
Haloarcula marismortui [TaxId:272569] [261895] (1 PDB entry)
- Domain for 4pxk:
  - Domain d4pxka_: 4pxk A: [261896]
    automated match to d4jr8a_
    complexed with lfa, so4; mutant
Haloarcula vallismortis [TaxId:28442] [237952] (2 PDB entries)
1. Domain for 4jr8:
  - Domain d4jr8a_: 4jr8 A: [237953]
    automated match to d1s52a_
    complexed with 22b, ret
2. Domain for 4l35:
  - Domain d4l35a_: 4l35 A: [256970]
    automated match to d4jr8a_
    complexed with 22b, ret
Haloquadratum walsbyi [TaxId:362976] [275383] (2 PDB entries)
1. Domains for 4qi1:
  1. Domain d4qi1a_: 4qi1 A: [275384]
    automated match to d1cwqa_
    complexed with gol, mpg, ret
  2. Domain d4qi1b_: 4qi1 B: [275385]
    automated match to d1cwqa_
    complexed with gol, mpg, ret
  3. Domain d4qi1c_: 4qi1 C: [275386]
    automated match to d1cwqa_
    complexed with gol, mpg, ret
2. Domains for 4qid:
  1. Domain d4qida_: 4qid A: [275387]
    automated match to d1cwqa_
    complexed with act, mpg, ret
  2. Domain d4qidb_: 4qid B: [275388]
    automated match to d1cwqa_
    complexed with act, mpg, ret
Haloquadratum walsbyi [TaxId:768065] [277306] (1 PDB entry)
- Domains for 4wav:
  1. Domain d4wava_: 4wav A: [277307]
    automated match to d1cwqa_
    complexed with mpg, ret; mutant
  2. Domain d4wavb_: 4wav B: [277311]
    automated match to d1cwqa_
    complexed with mpg, ret; mutant
Haloterrigena thermotolerans [TaxId:121872] [226666] (1 PDB entry)
- Domain for 4fbz:
  - Domain d4fbza_: 4fbz A: [221108]
    automated match to d1brda_
    complexed with 22b, bng, l2p, ret, so4, sql
Natronomonas pharaonis [TaxId:2257] [256038] (6 PDB entries)
1. Domains for 3qbg:
  1. Domain d3qbga_: 3qbg A: [248844]
    automated match to d1e12a_
    complexed with 22b, bng, ret
  2. Domain d3qbgb_: 3qbg B: [248845]
    automated match to d1e12a_
    complexed with 22b, bng, ret
  3. Domain d3qbgd_: 3qbg D: [248846]
    automated match to d1e12a_
    complexed with 22b, bng, ret
2. Domains for 3qbi:
  1. Domain d3qbia_: 3qbi A: [248847]
    automated match to d1e12a_
    complexed with 22b, bng, ret
  2. Domain d3qbib_: 3qbi B: [248848]
    automated match to d1e12a_
    complexed with 22b, bng, ret
  3. Domain d3qbid_: 3qbi D: [248849]
    automated match to d1e12a_
    complexed with 22b, bng, ret
3. Domains for 3qbk:
  1. Domain d3qbka_: 3qbk A: [248850]
    automated match to d1e12a_
    complexed with 22b, br, ret
  2. Domain d3qbkb_: 3qbk B: [248851]
    automated match to d1e12a_
    complexed with 22b, br, ret
  3. Domain d3qbkd_: 3qbk D: [248852]
    automated match to d1e12a_
    complexed with 22b, br, ret
4. Domains for 3qbl:
  1. Domain d3qbla_: 3qbl A: [248853]
    automated match to d1e12a_
    complexed with 22b, no3, ret
  2. Domain d3qblb_: 3qbl B: [248854]
    automated match to d1e12a_
    complexed with 22b, no3, ret
  3. Domain d3qbld_: 3qbl D: [248855]
    automated match to d1e12a_
    complexed with 22b, no3, ret
5. Domains for 3vvk:
  1. Domain d3vvka_: 3vvk A: [250705]
    automated match to d1e12a_
    complexed with 22b, azi, bng, l3p, ret
  2. Domain d3vvkb_: 3vvk B: [250706]
    automated match to d1e12a_
    complexed with 22b, azi, bng, l3p, ret
  3. Domain d3vvkc_: 3vvk C: [250707]
    automated match to d1e12a_
    complexed with 22b, azi, bng, l3p, ret
  4. Domain d3vvkd_: 3vvk D: [250708]
    automated match to d1e12a_
    complexed with 22b, azi, bng, l3p, ret
  5. Domain d3vvke_: 3vvk E: [250709]
    automated match to d1e12a_
    complexed with 22b, azi, bng, l3p, ret
  6. Domain d3vvkf_: 3vvk F: [250710]
    automated match to d1e12a_
    complexed with 22b, azi, bng, l3p, ret
6. Domains for 4qry:
  1. Domain d4qrya_: 4qry A: [273909]
    automated match to d3qbga_
    complexed with bng, br, l2p, ret
  2. Domain d4qryb_: 4qry B: [273907]
    automated match to d3qbga_
    complexed with bng, br, l2p, ret
  3. Domain d4qryc_: 4qry C: [273908]
    automated match to d3qbga_
    complexed with bng, br, l2p, ret
  4. Domain d4qrye_: 4qry E: [273904]
    automated match to d3qbga_
    complexed with bng, br, l2p, ret
  5. Domain d4qryf_: 4qry F: [273906]
    automated match to d3qbga_
    complexed with bng, br, l2p, ret
  6. Domain d4qryg_: 4qry G: [273910]
    automated match to d3qbga_
    complexed with bng, br, l2p, ret
Natronomonas pharaonis [TaxId:348780] [255740] (2 PDB entries)
1. Domains for 3a7k:
  1. Domain d3a7ka_: 3a7k A: [245069]
    automated match to d1e12a_
    complexed with 22b, cl, l1p, l2p, l3p, ret
  2. Domain d3a7kb_: 3a7k B: [245070]
    automated match to d1e12a_
    complexed with 22b, cl, l1p, l2p, l3p, ret
  3. Domain d3a7kd_: 3a7k D: [245071]
    automated match to d1e12a_
    complexed with 22b, cl, l1p, l2p, l3p, ret
2. Domains for 3abw:
  1. Domain d3abwa_: 3abw A: [245080]
    automated match to d1e12a_
    complexed with 22b, azi, l3p, ret
  2. Domain d3abwb_: 3abw B: [245081]
    automated match to d1e12a_
    complexed with 22b, azi, l3p, ret
  3. Domain d3abwd_: 3abw D: [245082]
    automated match to d1e12a_
    complexed with 22b, azi, l3p, ret
Salinibacter ruber [TaxId:146919] [255796] (1 PDB entry)
- Domains for 3ddl:
  1. Domain d3ddla_: 3ddl A: [245624]
    automated match to d4hyjb_
    complexed with pcw, px4, ret, sxn, unl
  2. Domain d3ddlb_: 3ddl B: [245625]
    automated match to d4hyjb_
    complexed with pcw, px4, ret, sxn, unl
Uncultured bacterium [TaxId:77133] [226659] (1 PDB entry)
- Domains for 4jq6:
  1. Domain d4jq6a_: 4jq6 A: [223936]
    automated match to d1brxa_
    complexed with li1, ret
  2. Domain d4jq6b_: 4jq6 B: [223937]
    automated match to d1brxa_
    complexed with li1, ret
  3. Domain d4jq6c_: 4jq6 C: [223938]
    automated match to d1brxa_
    complexed with li1, ret
Uncultured marine [TaxId:133804] [255409] (1 PDB entry)
- Domain for 2l6x:
  - Domain d2l6xa_: 2l6x A: [242792]
    automated match to d4jq6a_

More info for Protein automated matches from f.13.1.0: automated matches

Timeline for Protein automated matches from f.13.1.0: automated matches:

Protein automated matches from f.13.1.0: automated matches first appeared in SCOPe 2.03
Protein automated matches from f.13.1.0: automated matches appears in SCOPe 2.04
Protein automated matches from f.13.1.0: automated matches appears in SCOPe 2.06
Protein automated matches from f.13.1.0: automated matches appears in the current release, SCOPe 2.08