Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1402144Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1403556Superfamily d.15.6: Superantigen toxins, C-terminal domain [54334] (2 families) (S)
  5. 1403767Family d.15.6.0: automated matches [227139] (1 protein)
    not a true family
  6. 1403768Protein automated matches [226841] (4 species)
    not a true protein

Species:

  1. 1403769Staphylococcus aureus [TaxId:1280] [225055] (5 PDB entries)
    1. Domain for 1xxg:
    2. Domain for 2rdg:
    3. Domain for 2rdh:
    4. Domains for 3mc0:
      1. 1403772Domain d3mc0b2: 3mc0 B:116-233 [199824]
        Other proteins in same PDB: d3mc0a_, d3mc0b1, d3mc0c_, d3mc0d1
        automated match to d1d5zc2
        complexed with act
      2. 1403773Domain d3mc0d2: 3mc0 D:116-233 [199826]
        Other proteins in same PDB: d3mc0a_, d3mc0b1, d3mc0c_, d3mc0d1
        automated match to d1d5zc2
        complexed with act
    5. Domains for 3owe:
      1. 1403775Domain d3oweb2: 3owe B:116-233 [200166]
        Other proteins in same PDB: d3owea_, d3oweb1, d3owec_, d3owed1, d3owee_, d3owef1, d3oweg_, d3oweh1, d3owei_, d3owej1, d3owek_, d3owel1, d3owem_, d3owen1, d3oweo_, d3owep1
        automated match to d1d5zc2
        mutant
      2. 1403776Domain d3owed2: 3owe D:116-233 [200168]
        Other proteins in same PDB: d3owea_, d3oweb1, d3owec_, d3owed1, d3owee_, d3owef1, d3oweg_, d3oweh1, d3owei_, d3owej1, d3owek_, d3owel1, d3owem_, d3owen1, d3oweo_, d3owep1
        automated match to d1d5zc2
        mutant
      3. 1403777Domain d3owef2: 3owe F:116-233 [200170]
        Other proteins in same PDB: d3owea_, d3oweb1, d3owec_, d3owed1, d3owee_, d3owef1, d3oweg_, d3oweh1, d3owei_, d3owej1, d3owek_, d3owel1, d3owem_, d3owen1, d3oweo_, d3owep1
        automated match to d1d5zc2
        mutant
      4. 1403778Domain d3oweh2: 3owe H:116-233 [200172]
        Other proteins in same PDB: d3owea_, d3oweb1, d3owec_, d3owed1, d3owee_, d3owef1, d3oweg_, d3oweh1, d3owei_, d3owej1, d3owek_, d3owel1, d3owem_, d3owen1, d3oweo_, d3owep1
        automated match to d1d5zc2
        mutant
      5. 1403779Domain d3owej2: 3owe J:116-233 [200174]
        Other proteins in same PDB: d3owea_, d3oweb1, d3owec_, d3owed1, d3owee_, d3owef1, d3oweg_, d3oweh1, d3owei_, d3owej1, d3owek_, d3owel1, d3owem_, d3owen1, d3oweo_, d3owep1
        automated match to d1d5zc2
        mutant
      6. 1403780Domain d3owel2: 3owe L:116-233 [200176]
        Other proteins in same PDB: d3owea_, d3oweb1, d3owec_, d3owed1, d3owee_, d3owef1, d3oweg_, d3oweh1, d3owei_, d3owej1, d3owek_, d3owel1, d3owem_, d3owen1, d3oweo_, d3owep1
        automated match to d1d5zc2
        mutant
      7. 1403781Domain d3owen2: 3owe N:116-233 [200178]
        Other proteins in same PDB: d3owea_, d3oweb1, d3owec_, d3owed1, d3owee_, d3owef1, d3oweg_, d3oweh1, d3owei_, d3owej1, d3owek_, d3owel1, d3owem_, d3owen1, d3oweo_, d3owep1
        automated match to d1d5zc2
        mutant
      8. 1403782Domain d3owep2: 3owe P:116-233 [200180]
        Other proteins in same PDB: d3owea_, d3oweb1, d3owec_, d3owed1, d3owee_, d3owef1, d3oweg_, d3oweh1, d3owei_, d3owej1, d3owek_, d3owel1, d3owem_, d3owen1, d3oweo_, d3owep1
        automated match to d1d5zc2
        mutant
  2. 1403783Staphylococcus aureus [TaxId:158878] [224923] (2 PDB entries)
    1. Domains for 2rdh:
      1. 1403784Domain d2rdhb2: 2rdh B:94-196 [231258]
        Other proteins in same PDB: d2rdha1, d2rdhb1, d2rdhc1, d2rdhd1
        automated match to d3o13a2
        complexed with na, po4
      2. 1403785Domain d2rdhc2: 2rdh C:94-196 [231260]
        Other proteins in same PDB: d2rdha1, d2rdhb1, d2rdhc1, d2rdhd1
        automated match to d3o13a2
        complexed with na, po4
      3. 1403786Domain d2rdhd2: 2rdh D:94-196 [231262]
        Other proteins in same PDB: d2rdha1, d2rdhb1, d2rdhc1, d2rdhd1
        automated match to d3o13a2
        complexed with na, po4
    2. Domain for 3o13:
  3. 1403788Staphylococcus aureus [TaxId:93061] [226096] (1 PDB entry)
  4. 1403791Staphylococcus aureus [TaxId:93062] [226095] (1 PDB entry)

More info for Protein automated matches from d.15.6.0: automated matches

Timeline for Protein automated matches from d.15.6.0: automated matches: