Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1555652Fold b.71: Glycosyl hydrolase domain [51010] (1 superfamily)
    folded sheet; greek-key
  4. 1555653Superfamily b.71.1: Glycosyl hydrolase domain [51011] (6 families) (S)
    this domain is C-terminal to the catalytic beta/alpha barrel domain
  5. 1556225Family b.71.1.0: automated matches [227134] (1 protein)
    not a true family
  6. 1556226Protein automated matches [226835] (27 species)
    not a true protein

Species:

  1. 1556227Bacillus clarkii [TaxId:79879] [256321] (1 PDB entry)
  2. 1556229Bacillus halmapalus [TaxId:79882] [255188] (2 PDB entries)
    1. Domain for 2gjp:
    2. Domain for 2gjr:
  3. 1556232Bacillus sp. [225223] (1 PDB entry)
  4. 1556234Bacillus sp. [TaxId:535911] [225473] (1 PDB entry)
  5. 1556236Bacillus subtilis [TaxId:224308] [228101] (4 PDB entries)
    1. Domains for 4m56:
      1. 1556240Domain d4m56a2: 4m56 A:483-561 [228102]
        Other proteins in same PDB: d4m56a1, d4m56b1
        automated match to d1uoka1
        complexed with glo, gol, so4
      2. 1556241Domain d4m56b2: 4m56 B:483-561 [235530]
        Other proteins in same PDB: d4m56a1, d4m56b1
        automated match to d4m56a2
        complexed with glo, gol, so4
    2. Domain for 4m8u:
    3. Domain for 4maz:
    4. Domain for 4mb1:
  6. Barley (Hordeum vulgare) [TaxId:4513] [255765] (2 PDB entries)
    1. Domain for 3bsg:
    2. Domain for 3bsh:
  7. Bifidobacterium adolescentis [TaxId:1680] [255184] (1 PDB entry)
  8. 1556248Erwinia rhapontici [TaxId:55212] [228313] (5 PDB entries)
    1. Domain for 4how:
    2. Domain for 4hox:
    3. Domain for 4hoz:
    4. Domain for 4hp5:
    5. Domain for 4hph:
  9. 1556254Flavobacterium sp. [TaxId:197856] [255817] (5 PDB entries)
    1. Domains for 3edd:
      1. 1556263Domain d3edda3: 3edd A:518-599 [245827]
        Other proteins in same PDB: d3edda1, d3edda2, d3eddb1, d3eddb2
        automated match to d1h3ga2
        complexed with acx, ca
      2. 1556264Domain d3eddb3: 3edd B:518-599 [245830]
        Other proteins in same PDB: d3edda1, d3edda2, d3eddb1, d3eddb2
        automated match to d1h3ga2
        complexed with acx, ca
    2. Domains for 3ede:
      1. 1556259Domain d3edea3: 3ede A:518-599 [245833]
        Other proteins in same PDB: d3edea1, d3edea2, d3edeb1, d3edeb2
        automated match to d1h3ga2
        complexed with ca, gol
      2. 1556260Domain d3edeb3: 3ede B:518-599 [245836]
        Other proteins in same PDB: d3edea1, d3edea2, d3edeb1, d3edeb2
        automated match to d1h3ga2
        complexed with ca, gol
    3. Domains for 3edf:
      1. 1556255Domain d3edfa3: 3edf A:518-599 [245839]
        Other proteins in same PDB: d3edfa1, d3edfa2, d3edfb1, d3edfb2
        automated match to d1h3ga2
        complexed with acx, ca, ce6, gol
      2. 1556256Domain d3edfb3: 3edf B:518-599 [245842]
        Other proteins in same PDB: d3edfa1, d3edfa2, d3edfb1, d3edfb2
        automated match to d1h3ga2
        complexed with acx, ca, ce6, gol
    4. Domains for 3edj:
      1. 1556257Domain d3edja3: 3edj A:518-599 [245845]
        Other proteins in same PDB: d3edja1, d3edja2, d3edjb1, d3edjb2
        automated match to d1h3ga2
        complexed with bcd, ca, gol
      2. 1556258Domain d3edjb3: 3edj B:518-599 [245848]
        Other proteins in same PDB: d3edja1, d3edja2, d3edjb1, d3edjb2
        automated match to d1h3ga2
        complexed with bcd, ca, gol
    5. Domains for 3edk:
      1. 1556261Domain d3edka3: 3edk A:518-599 [245851]
        Other proteins in same PDB: d3edka1, d3edka2, d3edkb1, d3edkb2
        automated match to d1h3ga2
        complexed with ca, ce8, gol
      2. 1556262Domain d3edkb3: 3edk B:518-599 [245854]
        Other proteins in same PDB: d3edka1, d3edka2, d3edkb1, d3edkb2
        automated match to d1h3ga2
        complexed with ca, ce8, gol
  10. 1556265Fungus (Aspergillus oryzae) [TaxId:5062] [256308] (1 PDB entry)
  11. 1556267Geobacillus sp. [TaxId:258999] [225394] (1 PDB entry)
  12. 1556269Human (Homo sapiens) [TaxId:9606] [225771] (13 PDB entries)
    1. Domain for 1xgz:
    2. Domain for 1xh0:
    3. Domain for 1xh1:
    4. Domain for 1xh2:
    5. Domains for 1xv8:
      1. 1556289Domain d1xv8a1: 1xv8 A:409-496 [122340]
        Other proteins in same PDB: d1xv8a2, d1xv8b2
        automated match to d1jxka1
        complexed with ca, cl
      2. 1556290Domain d1xv8b1: 1xv8 B:409-496 [122342]
        Other proteins in same PDB: d1xv8a2, d1xv8b2
        automated match to d1jxka1
        complexed with ca, cl
    6. Domain for 3dhp:
    7. Domains for 3h53:
      1. 1556277Domain d3h53a2: 3h53 A:310-404 [210880]
        Other proteins in same PDB: d3h53a1, d3h53b1
        automated match to d1ktba1
        complexed with gol, nag
      2. 1556278Domain d3h53b2: 3h53 B:310-404 [210882]
        Other proteins in same PDB: d3h53a1, d3h53b1
        automated match to d1ktba1
        complexed with gol, nag
    8. Domains for 3h54:
      1. 1556286Domain d3h54a2: 3h54 A:310-404 [210884]
        Other proteins in same PDB: d3h54a1, d3h54b1
        automated match to d1ktba1
        complexed with a2g, gol, nag
      2. 1556287Domain d3h54b2: 3h54 B:310-404 [210886]
        Other proteins in same PDB: d3h54a1, d3h54b1
        automated match to d1ktba1
        complexed with a2g, gol, nag
    9. Domains for 3h55:
      1. 1556281Domain d3h55a2: 3h55 A:310-404 [210888]
        Other proteins in same PDB: d3h55a1, d3h55b1
        automated match to d1ktba1
        complexed with cit, gla, nag
      2. 1556282Domain d3h55b2: 3h55 B:310-404 [210890]
        Other proteins in same PDB: d3h55a1, d3h55b1
        automated match to d1ktba1
        complexed with cit, gla, nag
    10. Domains for 3igu:
      1. 1556283Domain d3igua2: 3igu A:310-404 [211680]
        Other proteins in same PDB: d3igua1, d3igub1
        automated match to d1ktba1
        complexed with 7jz, gol, nag
      2. 1556284Domain d3igub2: 3igu B:310-404 [211682]
        Other proteins in same PDB: d3igua1, d3igub1
        automated match to d1ktba1
        complexed with 7jz, gol, nag
    11. Domains for 4do4:
      1. 1556270Domain d4do4a2: 4do4 A:310-404 [219885]
        Other proteins in same PDB: d4do4a1, d4do4b1
        automated match to d1ktba1
        complexed with acy, cit, djn, gol, nag
      2. 1556271Domain d4do4b2: 4do4 B:310-417 [219887]
        Other proteins in same PDB: d4do4a1, d4do4b1
        automated match to d1ktba1
        complexed with acy, cit, djn, gol, nag
    12. Domains for 4do5:
      1. 1556272Domain d4do5a2: 4do5 A:310-404 [219889]
        Other proteins in same PDB: d4do5a1, d4do5b1
        automated match to d1ktba1
        complexed with cit, dgj, gol, nag
      2. 1556273Domain d4do5b2: 4do5 B:310-417 [219891]
        Other proteins in same PDB: d4do5a1, d4do5b1
        automated match to d1ktba1
        complexed with cit, dgj, gol, nag
    13. Domains for 4do6:
      1. 1556275Domain d4do6a2: 4do6 A:310-405 [219893]
        Other proteins in same PDB: d4do6a1, d4do6b1
        automated match to d1ktba1
        complexed with 2pe, bgc, cit, glc, nag
      2. 1556276Domain d4do6b2: 4do6 B:310-417 [219895]
        Other proteins in same PDB: d4do6a1, d4do6b1
        automated match to d1ktba1
        complexed with 2pe, bgc, cit, glc, nag
  13. 1556291Lactobacillus acidophilus [TaxId:272621] [226448] (1 PDB entry)
  14. 1556293Malbranchea cinnamomea [TaxId:5041] [226683] (1 PDB entry)
  15. 1556295Neisseria polysaccharea [TaxId:489] [226281] (5 PDB entries)
    1. Domain for 3ueq:
    2. Domain for 4flo:
    3. Domain for 4flq:
    4. Domain for 4flr:
    5. Domain for 4fls:
  16. 1556301Oryzias latipes [TaxId:8090] [226402] (1 PDB entry)
  17. 1556303Paenibacillus macerans [TaxId:44252] [256322] (2 PDB entries)
    1. Domain for 3wms:
    2. Domain for 4jcl:
  18. 1556306Pig (Sus scrofa) [TaxId:9823] [225876] (3 PDB entries)
    1. Domain for 1vah:
    2. Domain for 3l2l:
    3. Domain for 3l2m:
  19. 1556310Protaminobacter rubrum [TaxId:126825] [225681] (2 PDB entries)
    1. Domain for 3gbd:
    2. Domain for 3gbe:
  20. 1556313Pseudomonas mesoacidophila [TaxId:265293] [224869] (9 PDB entries)
    1. Domains for 1zja:
      1. 1556314Domain d1zjaa2: 1zja A:479-557 [203331]
        Other proteins in same PDB: d1zjaa1, d1zjab1
        automated match to d1m53a1
        complexed with ca, trs
      2. 1556315Domain d1zjab2: 1zja B:479-557 [203333]
        Other proteins in same PDB: d1zjaa1, d1zjab1
        automated match to d1m53a1
        complexed with ca, trs
    2. Domains for 1zjb:
      1. 1556318Domain d1zjba2: 1zjb A:479-557 [203335]
        Other proteins in same PDB: d1zjba1, d1zjbb1
        automated match to d1m53a1
        complexed with ca, trs
      2. 1556319Domain d1zjbb2: 1zjb B:479-557 [203337]
        Other proteins in same PDB: d1zjba1, d1zjbb1
        automated match to d1m53a1
        complexed with ca, trs
    3. Domains for 2pwd:
      1. 1556316Domain d2pwda2: 2pwd A:479-557 [205665]
        Other proteins in same PDB: d2pwda1, d2pwdb1
        automated match to d1m53a1
        complexed with ca, noj
      2. 1556317Domain d2pwdb2: 2pwd B:479-557 [205667]
        Other proteins in same PDB: d2pwda1, d2pwdb1
        automated match to d1m53a1
        complexed with ca, noj
    4. Domains for 2pwe:
      1. 1556326Domain d2pwea2: 2pwe A:479-557 [205669]
        Other proteins in same PDB: d2pwea1, d2pweb1
        automated match to d1m53a1
        complexed with ca, suc; mutant
      2. 1556327Domain d2pweb2: 2pwe B:479-557 [205671]
        Other proteins in same PDB: d2pwea1, d2pweb1
        automated match to d1m53a1
        complexed with ca, suc; mutant
    5. Domains for 2pwf:
      1. 1556320Domain d2pwfa2: 2pwf A:479-557 [205673]
        Other proteins in same PDB: d2pwfa1, d2pwfb1, d2pwfc1, d2pwfd1
        automated match to d1m53a1
        complexed with bgc, ca; mutant
      2. 1556321Domain d2pwfb2: 2pwf B:479-557 [205675]
        Other proteins in same PDB: d2pwfa1, d2pwfb1, d2pwfc1, d2pwfd1
        automated match to d1m53a1
        complexed with bgc, ca; mutant
      3. 1556322Domain d2pwfc2: 2pwf C:479-557 [205677]
        Other proteins in same PDB: d2pwfa1, d2pwfb1, d2pwfc1, d2pwfd1
        automated match to d1m53a1
        complexed with bgc, ca; mutant
      4. 1556323Domain d2pwfd2: 2pwf D:479-557 [205679]
        Other proteins in same PDB: d2pwfa1, d2pwfb1, d2pwfc1, d2pwfd1
        automated match to d1m53a1
        complexed with bgc, ca; mutant
    6. Domains for 2pwg:
      1. 1556332Domain d2pwga2: 2pwg A:479-557 [205681]
        Other proteins in same PDB: d2pwga1, d2pwgb1
        automated match to d1m53a1
        complexed with ca, cts
      2. 1556333Domain d2pwgb2: 2pwg B:479-557 [205683]
        Other proteins in same PDB: d2pwga1, d2pwgb1
        automated match to d1m53a1
        complexed with ca, cts
    7. Domains for 2pwh:
      1. 1556324Domain d2pwha2: 2pwh A:479-557 [205685]
        Other proteins in same PDB: d2pwha1, d2pwhb1
        automated match to d1m53a1
        complexed with ca
      2. 1556325Domain d2pwhb2: 2pwh B:479-557 [205687]
        Other proteins in same PDB: d2pwha1, d2pwhb1
        automated match to d1m53a1
        complexed with ca
    8. Domains for 4go8:
      1. 1556330Domain d4go8a2: 4go8 A:479-556 [222049]
        Other proteins in same PDB: d4go8a1, d4go8b1
        automated match to d1m53a1
        complexed with ca, trs; mutant
      2. 1556331Domain d4go8b2: 4go8 B:479-557 [222051]
        Other proteins in same PDB: d4go8a1, d4go8b1
        automated match to d1m53a1
        complexed with ca, trs; mutant
    9. Domains for 4go9:
      1. 1556328Domain d4go9a2: 4go9 A:479-557 [222053]
        Other proteins in same PDB: d4go9a1, d4go9b1
        automated match to d1m53a1
        complexed with ca, trs; mutant
      2. 1556329Domain d4go9b2: 4go9 B:479-557 [222055]
        Other proteins in same PDB: d4go9a1, d4go9b1
        automated match to d1m53a1
        complexed with ca, trs; mutant
  21. 1556334Pyrococcus woesei [TaxId:2262] [226293] (1 PDB entry)
  22. 1556336Streptococcus mutans [231716] (2 PDB entries)
    1. Domain for 2zic:
    2. Domain for 2zid:
  23. 1556339Sulfolobus tokodaii [TaxId:273063] [225872] (1 PDB entry)
  24. Thermoactinomyces vulgaris [TaxId:2026] [254921] (6 PDB entries)
    1. Domains for 1vfm:
      1. 1556349Domain d1vfma2: 1vfm A:503-585 [120043]
        Other proteins in same PDB: d1vfma1, d1vfma3, d1vfmb1, d1vfmb3
        automated match to d1wzla2
        complexed with ca
      2. 1556350Domain d1vfmb2: 1vfm B:503-585 [120046]
        Other proteins in same PDB: d1vfma1, d1vfma3, d1vfmb1, d1vfmb3
        automated match to d1wzla2
        complexed with ca
    2. Domains for 1vfo:
      1. 1556347Domain d1vfoa2: 1vfo A:503-585 [120049]
        Other proteins in same PDB: d1vfoa1, d1vfoa3, d1vfob1, d1vfob3
        automated match to d1wzla2
        complexed with ca
      2. 1556348Domain d1vfob2: 1vfo B:503-585 [120052]
        Other proteins in same PDB: d1vfoa1, d1vfoa3, d1vfob1, d1vfob3
        automated match to d1wzla2
        complexed with ca
    3. Domains for 1vfu:
      1. 1556351Domain d1vfua2: 1vfu A:503-585 [120056]
        Other proteins in same PDB: d1vfua1, d1vfua3, d1vfub1, d1vfub3
        automated match to d1wzla2
        complexed with ca
      2. 1556352Domain d1vfub2: 1vfu B:503-585 [120059]
        Other proteins in same PDB: d1vfua1, d1vfua3, d1vfub1, d1vfub3
        automated match to d1wzla2
        complexed with ca
    4. Domains for 1wzk:
      1. 1556345Domain d1wzka2: 1wzk A:503-585 [121508]
        Other proteins in same PDB: d1wzka1, d1wzka3, d1wzkb1, d1wzkb3
        automated match to d1wzla2
        complexed with ca
      2. 1556346Domain d1wzkb2: 1wzk B:503-585 [121511]
        Other proteins in same PDB: d1wzka1, d1wzka3, d1wzkb1, d1wzkb3
        automated match to d1wzla2
        complexed with ca
    5. Domains for 1wzl:
      1. 1556343Domain d1wzla2: 1wzl A:503-585 [121514]
        Other proteins in same PDB: d1wzla1, d1wzla3, d1wzlb1, d1wzlb3
        automated match to d1wzla2
        complexed with ca
      2. 1556344Domain d1wzlb2: 1wzl B:503-585 [121517]
        Other proteins in same PDB: d1wzla1, d1wzla3, d1wzlb1, d1wzlb3
        automated match to d1wzlb2
        complexed with ca
    6. Domain for 2d0f:
  25. 1556353Thermotoga maritima [TaxId:2336] [231746] (10 PDB entries)
    1. Domains for 2zwy:
      1. 1556370Domain d2zwya2: 2zwy A:357-448 [231753]
        Other proteins in same PDB: d2zwya1, d2zwyb1
        automated match to d1hl8a1
      2. 1556371Domain d2zwyb2: 2zwy B:357-448 [231747]
        Other proteins in same PDB: d2zwya1, d2zwyb1
        automated match to d1hl8a1
    2. Domains for 2zwz:
      1. 1556356Domain d2zwza2: 2zwz A:357-447 [231749]
        Other proteins in same PDB: d2zwza1, d2zwzb1
        automated match to d1hl8a1
        complexed with zwz
      2. 1556357Domain d2zwzb2: 2zwz B:357-447 [231751]
        Other proteins in same PDB: d2zwza1, d2zwzb1
        automated match to d1hl8a1
        complexed with zwz
    3. Domains for 2zx5:
      1. 1556372Domain d2zx5a2: 2zx5 A:357-447 [245017]
        Other proteins in same PDB: d2zx5a1, d2zx5b1
        automated match to d2zwyb2
        complexed with zx5
      2. 1556373Domain d2zx5b2: 2zx5 B:357-447 [245019]
        Other proteins in same PDB: d2zx5a1, d2zx5b1
        automated match to d2zwyb2
        complexed with zx5
    4. Domains for 2zx6:
      1. 1556360Domain d2zx6a2: 2zx6 A:357-448 [245021]
        Other proteins in same PDB: d2zx6a1, d2zx6b1
        automated match to d2zwyb2
        complexed with zx6
      2. 1556361Domain d2zx6b2: 2zx6 B:357-448 [245023]
        Other proteins in same PDB: d2zx6a1, d2zx6b1
        automated match to d2zwyb2
        complexed with zx6
    5. Domains for 2zx7:
      1. 1556362Domain d2zx7a2: 2zx7 A:357-448 [245025]
        Other proteins in same PDB: d2zx7a1, d2zx7b1
        automated match to d2zwyb2
        complexed with zx7
      2. 1556363Domain d2zx7b2: 2zx7 B:357-448 [245027]
        Other proteins in same PDB: d2zx7a1, d2zx7b1
        automated match to d2zwyb2
        complexed with zx7
    6. Domains for 2zx8:
      1. 1556358Domain d2zx8a2: 2zx8 A:357-447 [245029]
        Other proteins in same PDB: d2zx8a1, d2zx8b1
        automated match to d2zwyb2
        complexed with zx8
      2. 1556359Domain d2zx8b2: 2zx8 B:357-447 [245031]
        Other proteins in same PDB: d2zx8a1, d2zx8b1
        automated match to d2zwyb2
        complexed with zx8
    7. Domains for 2zx9:
      1. 1556366Domain d2zx9a2: 2zx9 A:357-448 [245033]
        Other proteins in same PDB: d2zx9a1, d2zx9b1
        automated match to d2zwyb2
        complexed with zx9
      2. 1556367Domain d2zx9b2: 2zx9 B:357-448 [245035]
        Other proteins in same PDB: d2zx9a1, d2zx9b1
        automated match to d2zwyb2
        complexed with zx9
    8. Domains for 2zxa:
      1. 1556364Domain d2zxaa2: 2zxa A:357-448 [245037]
        Other proteins in same PDB: d2zxaa1, d2zxab1
        automated match to d2zwyb2
        complexed with zxa
      2. 1556365Domain d2zxab2: 2zxa B:357-448 [245039]
        Other proteins in same PDB: d2zxaa1, d2zxab1
        automated match to d2zwyb2
        complexed with zxa
    9. Domains for 2zxb:
      1. 1556368Domain d2zxba2: 2zxb A:357-448 [245041]
        Other proteins in same PDB: d2zxba1, d2zxbb1
        automated match to d2zwyb2
        complexed with zxb
      2. 1556369Domain d2zxbb2: 2zxb B:357-448 [245043]
        Other proteins in same PDB: d2zxba1, d2zxbb1
        automated match to d2zwyb2
        complexed with zxb
    10. Domains for 2zxd:
      1. 1556354Domain d2zxda2: 2zxd A:357-447 [245045]
        Other proteins in same PDB: d2zxda1, d2zxdb1
        automated match to d2zwyb2
        complexed with zxd
      2. 1556355Domain d2zxdb2: 2zxd B:357-447 [245047]
        Other proteins in same PDB: d2zxda1, d2zxdb1
        automated match to d2zwyb2
        complexed with zxd
  26. 1556374Thermotoga maritima [TaxId:243274] [231485] (1 PDB entry)
  27. 1556377Trichoderma reesei [TaxId:51453] [255994] (4 PDB entries)
    1. Domain for 3og2:
    2. Domain for 3ogr:
    3. Domain for 3ogs:
    4. Domain for 3ogv:

More info for Protein automated matches from b.71.1.0: automated matches

Timeline for Protein automated matches from b.71.1.0: automated matches: