Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1327893Fold b.71: Glycosyl hydrolase domain [51010] (1 superfamily)
    folded sheet; greek-key
  4. 1327894Superfamily b.71.1: Glycosyl hydrolase domain [51011] (6 families) (S)
    this domain is C-terminal to the catalytic beta/alpha barrel domain
  5. 1328473Family b.71.1.0: automated matches [227134] (1 protein)
    not a true family
  6. 1328474Protein automated matches [226835] (18 species)
    not a true protein

Species:

  1. 1328475Bacillus sp. [225223] (1 PDB entry)
  2. 1328477Bacillus sp. [TaxId:535911] [225473] (1 PDB entry)
  3. 1328479Bacillus subtilis [TaxId:224308] [228101] (4 PDB entries)
    1. Domains for 4m56:
      1. 1328483Domain d4m56a2: 4m56 A:483-561 [228102]
        Other proteins in same PDB: d4m56a1, d4m56b1
        automated match to d1uoka1
        complexed with glo, gol, so4
      2. 1328484Domain d4m56b2: 4m56 B:483-561 [235530]
        Other proteins in same PDB: d4m56a1, d4m56b1
        automated match to d4m56a2
        complexed with glo, gol, so4
    2. Domain for 4m8u:
    3. Domain for 4maz:
    4. Domain for 4mb1:
  4. 1328485Erwinia rhapontici [TaxId:55212] [228313] (5 PDB entries)
    1. Domain for 4how:
    2. Domain for 4hox:
    3. Domain for 4hoz:
    4. Domain for 4hp5:
    5. Domain for 4hph:
  5. 1328491Geobacillus sp. [TaxId:258999] [225394] (1 PDB entry)
  6. 1328493Human (Homo sapiens) [TaxId:9606] [225771] (7 PDB entries)
    1. Domains for 3h53:
      1. 1328500Domain d3h53a2: 3h53 A:310-404 [210880]
        Other proteins in same PDB: d3h53a1, d3h53b1
        automated match to d1ktba1
        complexed with gol, nag
      2. 1328501Domain d3h53b2: 3h53 B:310-404 [210882]
        Other proteins in same PDB: d3h53a1, d3h53b1
        automated match to d1ktba1
        complexed with gol, nag
    2. Domains for 3h54:
      1. 1328506Domain d3h54a2: 3h54 A:310-404 [210884]
        Other proteins in same PDB: d3h54a1, d3h54b1
        automated match to d1ktba1
        complexed with a2g, gol, nag
      2. 1328507Domain d3h54b2: 3h54 B:310-404 [210886]
        Other proteins in same PDB: d3h54a1, d3h54b1
        automated match to d1ktba1
        complexed with a2g, gol, nag
    3. Domains for 3h55:
      1. 1328502Domain d3h55a2: 3h55 A:310-404 [210888]
        Other proteins in same PDB: d3h55a1, d3h55b1
        automated match to d1ktba1
        complexed with cit, gla, nag
      2. 1328503Domain d3h55b2: 3h55 B:310-404 [210890]
        Other proteins in same PDB: d3h55a1, d3h55b1
        automated match to d1ktba1
        complexed with cit, gla, nag
    4. Domains for 3igu:
      1. 1328504Domain d3igua2: 3igu A:310-404 [211680]
        Other proteins in same PDB: d3igua1, d3igub1
        automated match to d1ktba1
        complexed with 7jz, gol, nag
      2. 1328505Domain d3igub2: 3igu B:310-404 [211682]
        Other proteins in same PDB: d3igua1, d3igub1
        automated match to d1ktba1
        complexed with 7jz, gol, nag
    5. Domains for 4do4:
      1. 1328494Domain d4do4a2: 4do4 A:310-404 [219885]
        Other proteins in same PDB: d4do4a1, d4do4b1
        automated match to d1ktba1
        complexed with acy, cit, djn, gol, nag
      2. 1328495Domain d4do4b2: 4do4 B:310-417 [219887]
        Other proteins in same PDB: d4do4a1, d4do4b1
        automated match to d1ktba1
        complexed with acy, cit, djn, gol, nag
    6. Domains for 4do5:
      1. 1328496Domain d4do5a2: 4do5 A:310-404 [219889]
        Other proteins in same PDB: d4do5a1, d4do5b1
        automated match to d1ktba1
        complexed with cit, dgj, gol, nag
      2. 1328497Domain d4do5b2: 4do5 B:310-417 [219891]
        Other proteins in same PDB: d4do5a1, d4do5b1
        automated match to d1ktba1
        complexed with cit, dgj, gol, nag
    7. Domains for 4do6:
      1. 1328498Domain d4do6a2: 4do6 A:310-405 [219893]
        Other proteins in same PDB: d4do6a1, d4do6b1
        automated match to d1ktba1
        complexed with 2pe, bgc, cit, glc, nag
      2. 1328499Domain d4do6b2: 4do6 B:310-417 [219895]
        Other proteins in same PDB: d4do6a1, d4do6b1
        automated match to d1ktba1
        complexed with 2pe, bgc, cit, glc, nag
  7. 1328508Lactobacillus acidophilus [TaxId:272621] [226448] (1 PDB entry)
  8. 1328510Malbranchea cinnamomea [TaxId:5041] [226683] (1 PDB entry)
  9. 1328512Neisseria polysaccharea [TaxId:489] [226281] (5 PDB entries)
    1. Domain for 3ueq:
    2. Domain for 4flo:
    3. Domain for 4flq:
    4. Domain for 4flr:
    5. Domain for 4fls:
  10. 1328518Oryzias latipes [TaxId:8090] [226402] (1 PDB entry)
  11. 1328520Pig (Sus scrofa) [TaxId:9823] [225876] (2 PDB entries)
    1. Domain for 3l2l:
    2. Domain for 3l2m:
  12. 1328523Protaminobacter rubrum [TaxId:126825] [225681] (2 PDB entries)
    1. Domain for 3gbd:
    2. Domain for 3gbe:
  13. 1328526Pseudomonas mesoacidophila [TaxId:265293] [224869] (9 PDB entries)
    1. Domains for 1zja:
      1. 1328527Domain d1zjaa2: 1zja A:479-557 [203331]
        Other proteins in same PDB: d1zjaa1, d1zjab1
        automated match to d1m53a1
        complexed with ca, trs
      2. 1328528Domain d1zjab2: 1zja B:479-557 [203333]
        Other proteins in same PDB: d1zjaa1, d1zjab1
        automated match to d1m53a1
        complexed with ca, trs
    2. Domains for 1zjb:
      1. 1328531Domain d1zjba2: 1zjb A:479-557 [203335]
        Other proteins in same PDB: d1zjba1, d1zjbb1
        automated match to d1m53a1
        complexed with ca, trs
      2. 1328532Domain d1zjbb2: 1zjb B:479-557 [203337]
        Other proteins in same PDB: d1zjba1, d1zjbb1
        automated match to d1m53a1
        complexed with ca, trs
    3. Domains for 2pwd:
      1. 1328529Domain d2pwda2: 2pwd A:479-557 [205665]
        Other proteins in same PDB: d2pwda1, d2pwdb1
        automated match to d1m53a1
        complexed with ca, noj
      2. 1328530Domain d2pwdb2: 2pwd B:479-557 [205667]
        Other proteins in same PDB: d2pwda1, d2pwdb1
        automated match to d1m53a1
        complexed with ca, noj
    4. Domains for 2pwe:
      1. 1328539Domain d2pwea2: 2pwe A:479-557 [205669]
        Other proteins in same PDB: d2pwea1, d2pweb1
        automated match to d1m53a1
        complexed with ca, suc; mutant
      2. 1328540Domain d2pweb2: 2pwe B:479-557 [205671]
        Other proteins in same PDB: d2pwea1, d2pweb1
        automated match to d1m53a1
        complexed with ca, suc; mutant
    5. Domains for 2pwf:
      1. 1328533Domain d2pwfa2: 2pwf A:479-557 [205673]
        Other proteins in same PDB: d2pwfa1, d2pwfb1, d2pwfc1, d2pwfd1
        automated match to d1m53a1
        complexed with bgc, ca; mutant
      2. 1328534Domain d2pwfb2: 2pwf B:479-557 [205675]
        Other proteins in same PDB: d2pwfa1, d2pwfb1, d2pwfc1, d2pwfd1
        automated match to d1m53a1
        complexed with bgc, ca; mutant
      3. 1328535Domain d2pwfc2: 2pwf C:479-557 [205677]
        Other proteins in same PDB: d2pwfa1, d2pwfb1, d2pwfc1, d2pwfd1
        automated match to d1m53a1
        complexed with bgc, ca; mutant
      4. 1328536Domain d2pwfd2: 2pwf D:479-557 [205679]
        Other proteins in same PDB: d2pwfa1, d2pwfb1, d2pwfc1, d2pwfd1
        automated match to d1m53a1
        complexed with bgc, ca; mutant
    6. Domains for 2pwg:
      1. 1328545Domain d2pwga2: 2pwg A:479-557 [205681]
        Other proteins in same PDB: d2pwga1, d2pwgb1
        automated match to d1m53a1
        complexed with ca, cts
      2. 1328546Domain d2pwgb2: 2pwg B:479-557 [205683]
        Other proteins in same PDB: d2pwga1, d2pwgb1
        automated match to d1m53a1
        complexed with ca, cts
    7. Domains for 2pwh:
      1. 1328537Domain d2pwha2: 2pwh A:479-557 [205685]
        Other proteins in same PDB: d2pwha1, d2pwhb1
        automated match to d1m53a1
        complexed with ca
      2. 1328538Domain d2pwhb2: 2pwh B:479-557 [205687]
        Other proteins in same PDB: d2pwha1, d2pwhb1
        automated match to d1m53a1
        complexed with ca
    8. Domains for 4go8:
      1. 1328543Domain d4go8a2: 4go8 A:479-556 [222049]
        Other proteins in same PDB: d4go8a1, d4go8b1
        automated match to d1m53a1
        complexed with ca, trs; mutant
      2. 1328544Domain d4go8b2: 4go8 B:479-557 [222051]
        Other proteins in same PDB: d4go8a1, d4go8b1
        automated match to d1m53a1
        complexed with ca, trs; mutant
    9. Domains for 4go9:
      1. 1328541Domain d4go9a2: 4go9 A:479-557 [222053]
        Other proteins in same PDB: d4go9a1, d4go9b1
        automated match to d1m53a1
        complexed with ca, trs; mutant
      2. 1328542Domain d4go9b2: 4go9 B:479-557 [222055]
        Other proteins in same PDB: d4go9a1, d4go9b1
        automated match to d1m53a1
        complexed with ca, trs; mutant
  14. 1328547Pyrococcus woesei [TaxId:2262] [226293] (1 PDB entry)
  15. 1328549Streptococcus mutans [231716] (2 PDB entries)
    1. Domain for 2zic:
    2. Domain for 2zid:
  16. 1328552Sulfolobus tokodaii [TaxId:273063] [225872] (1 PDB entry)
  17. 1328554Thermotoga maritima [TaxId:2336] [231746] (2 PDB entries)
    1. Domains for 2zwy:
      1. 1328557Domain d2zwya2: 2zwy A:357-448 [231753]
        Other proteins in same PDB: d2zwya1, d2zwyb1
        automated match to d1hl8a1
      2. 1328558Domain d2zwyb2: 2zwy B:357-448 [231747]
        Other proteins in same PDB: d2zwya1, d2zwyb1
        automated match to d1hl8a1
    2. Domains for 2zwz:
      1. 1328555Domain d2zwza2: 2zwz A:357-447 [231749]
        Other proteins in same PDB: d2zwza1, d2zwzb1
        automated match to d1hl8a1
        complexed with zwz
      2. 1328556Domain d2zwzb2: 2zwz B:357-447 [231751]
        Other proteins in same PDB: d2zwza1, d2zwzb1
        automated match to d1hl8a1
        complexed with zwz
  18. 1328559Thermotoga maritima [TaxId:243274] [231485] (1 PDB entry)

More info for Protein automated matches from b.71.1.0: automated matches

Timeline for Protein automated matches from b.71.1.0: automated matches: