Lineage for Species: Bacillus stearothermophilus [TaxId: 1422]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2108258Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 2108259Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 2108851Family c.36.1.0: automated matches [227300] (1 protein)
    not a true family
  6. 2108852Protein automated matches [227126] (20 species)
    not a true protein
  7. 2108871Species Bacillus stearothermophilus [TaxId:1422] [226816] (3 PDB entries)

PDB entries in Species: Bacillus stearothermophilus [TaxId: 1422]:

  1. Domain(s) for 3duf:
    1. 2108880Domain d3dufb1: 3duf B:1-186 [199277]
      Other proteins in same PDB: d3dufa_, d3dufb2, d3dufc_, d3dufd2, d3dufe_, d3duff2, d3dufg_, d3dufh2, d3dufi_, d3dufj_
      automated match to d1umdb1
      complexed with k, mg, r1t
    2. 2108881Domain d3dufd1: 3duf D:1-186 [199279]
      Other proteins in same PDB: d3dufa_, d3dufb2, d3dufc_, d3dufd2, d3dufe_, d3duff2, d3dufg_, d3dufh2, d3dufi_, d3dufj_
      automated match to d1umdb1
      complexed with k, mg, r1t
    3. 2108882Domain d3duff1: 3duf F:1-186 [199281]
      Other proteins in same PDB: d3dufa_, d3dufb2, d3dufc_, d3dufd2, d3dufe_, d3duff2, d3dufg_, d3dufh2, d3dufi_, d3dufj_
      automated match to d1umdb1
      complexed with k, mg, r1t
    4. 2108883Domain d3dufh1: 3duf H:1-186 [199283]
      Other proteins in same PDB: d3dufa_, d3dufb2, d3dufc_, d3dufd2, d3dufe_, d3duff2, d3dufg_, d3dufh2, d3dufi_, d3dufj_
      automated match to d1umdb1
      complexed with k, mg, r1t
  2. Domain(s) for 3dv0:
    1. 2108876Domain d3dv0b1: 3dv0 B:1-186 [199287]
      Other proteins in same PDB: d3dv0a_, d3dv0b2, d3dv0c_, d3dv0d2, d3dv0e_, d3dv0f2, d3dv0g_, d3dv0h2, d3dv0i_, d3dv0j_
      automated match to d1umdb1
      complexed with k, mg, pyr, tpw
    2. 2108877Domain d3dv0d1: 3dv0 D:1-186 [199289]
      Other proteins in same PDB: d3dv0a_, d3dv0b2, d3dv0c_, d3dv0d2, d3dv0e_, d3dv0f2, d3dv0g_, d3dv0h2, d3dv0i_, d3dv0j_
      automated match to d1umdb1
      complexed with k, mg, pyr, tpw
    3. 2108878Domain d3dv0f1: 3dv0 F:1-186 [199291]
      Other proteins in same PDB: d3dv0a_, d3dv0b2, d3dv0c_, d3dv0d2, d3dv0e_, d3dv0f2, d3dv0g_, d3dv0h2, d3dv0i_, d3dv0j_
      automated match to d1umdb1
      complexed with k, mg, pyr, tpw
    4. 2108879Domain d3dv0h1: 3dv0 H:1-186 [199293]
      Other proteins in same PDB: d3dv0a_, d3dv0b2, d3dv0c_, d3dv0d2, d3dv0e_, d3dv0f2, d3dv0g_, d3dv0h2, d3dv0i_, d3dv0j_
      automated match to d1umdb1
      complexed with k, mg, pyr, tpw
  3. Domain(s) for 3dva:
    1. 2108872Domain d3dvab1: 3dva B:1-186 [199295]
      Other proteins in same PDB: d3dvaa_, d3dvab2, d3dvac_, d3dvad2, d3dvae_, d3dvaf2, d3dvag_, d3dvah2, d3dvai_, d3dvaj_
      automated match to d1umdb1
      complexed with k, mg, tpw
    2. 2108873Domain d3dvad1: 3dva D:1-186 [199297]
      Other proteins in same PDB: d3dvaa_, d3dvab2, d3dvac_, d3dvad2, d3dvae_, d3dvaf2, d3dvag_, d3dvah2, d3dvai_, d3dvaj_
      automated match to d1umdb1
      complexed with k, mg, tpw
    3. 2108874Domain d3dvaf1: 3dva F:1-186 [199299]
      Other proteins in same PDB: d3dvaa_, d3dvab2, d3dvac_, d3dvad2, d3dvae_, d3dvaf2, d3dvag_, d3dvah2, d3dvai_, d3dvaj_
      automated match to d1umdb1
      complexed with k, mg, tpw
    4. 2108875Domain d3dvah1: 3dva H:1-186 [199301]
      Other proteins in same PDB: d3dvaa_, d3dvab2, d3dvac_, d3dvad2, d3dvae_, d3dvaf2, d3dvag_, d3dvah2, d3dvai_, d3dvaj_
      automated match to d1umdb1
      complexed with k, mg, tpw

More info for Species Bacillus stearothermophilus [TaxId:1422] from c.36.1.0 automated matches

Timeline for Species Bacillus stearothermophilus [TaxId:1422] from c.36.1.0 automated matches: