Lineage for Species: Trypanosome (Trypanosoma brucei) [TaxId: 5691]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2090218Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2090219Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2094257Family c.2.1.0: automated matches [191313] (1 protein)
    not a true family
  6. 2094258Protein automated matches [190069] (238 species)
    not a true protein
  7. 2096341Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [226760] (20 PDB entries)

PDB entries in Species: Trypanosome (Trypanosoma brucei) [TaxId: 5691]:

  1. Domain(s) for 2yhi:
    1. 2096366Domain d2yhia_: 2yhi A: [207603]
      automated match to d1p33a_
      complexed with act, dtt, dtu, dtv, nap, w16
    2. 2096367Domain d2yhib_: 2yhi B: [207604]
      automated match to d1p33a_
      complexed with act, dtt, dtu, dtv, nap, w16
    3. 2096368Domain d2yhic_: 2yhi C: [207605]
      automated match to d1p33a_
      complexed with act, dtt, dtu, dtv, nap, w16
    4. 2096369Domain d2yhid_: 2yhi D: [207606]
      automated match to d1p33a_
      complexed with act, dtt, dtu, dtv, nap, w16
  2. Domain(s) for 2yhu:
    1. 2096382Domain d2yhua_: 2yhu A: [207607]
      automated match to d1p33a_
      complexed with act, ndp, whf
    2. 2096383Domain d2yhub_: 2yhu B: [207608]
      automated match to d1p33a_
      complexed with act, ndp, whf
    3. 2096384Domain d2yhuc_: 2yhu C: [207609]
      automated match to d1p33a_
      complexed with act, ndp, whf
    4. 2096385Domain d2yhud_: 2yhu D: [207610]
      automated match to d1p33a_
      complexed with act, ndp, whf
  3. Domain(s) for 3jq6:
    1. 2096350Domain d3jq6a_: 3jq6 A: [212012]
      automated match to d1p33a_
      complexed with dtt, dx1, nap
    2. 2096351Domain d3jq6b_: 3jq6 B: [212013]
      automated match to d1p33a_
      complexed with dtt, dx1, nap
    3. 2096352Domain d3jq6c_: 3jq6 C: [212014]
      automated match to d1p33a_
      complexed with dtt, dx1, nap
    4. 2096353Domain d3jq6d_: 3jq6 D: [212015]
      automated match to d1p33a_
      complexed with dtt, dx1, nap
  4. Domain(s) for 3jq7:
    1. 2096354Domain d3jq7a_: 3jq7 A: [212016]
      automated match to d1p33a_
      complexed with act, dtt, dx2, nap
    2. 2096355Domain d3jq7b_: 3jq7 B: [212017]
      automated match to d1p33a_
      complexed with act, dtt, dx2, nap
    3. 2096356Domain d3jq7c_: 3jq7 C: [212018]
      automated match to d1p33a_
      complexed with act, dtt, dx2, nap
    4. 2096357Domain d3jq7d_: 3jq7 D: [212019]
      automated match to d1p33a_
      complexed with act, dtt, dx2, nap
  5. Domain(s) for 3jq8:
    1. 2096378Domain d3jq8a_: 3jq8 A: [212020]
      automated match to d1p33a_
      complexed with dtt, dx3, nap
    2. 2096379Domain d3jq8b_: 3jq8 B: [212021]
      automated match to d1p33a_
      complexed with dtt, dx3, nap
    3. 2096380Domain d3jq8c_: 3jq8 C: [212022]
      automated match to d1p33a_
      complexed with dtt, dx3, nap
    4. 2096381Domain d3jq8d_: 3jq8 D: [212023]
      automated match to d1p33a_
      complexed with dtt, dx3, nap
  6. Domain(s) for 3jq9:
    1. 2096390Domain d3jq9a_: 3jq9 A: [212024]
      automated match to d1p33a_
      complexed with ax1, nap
    2. 2096391Domain d3jq9b_: 3jq9 B: [212025]
      automated match to d1p33a_
      complexed with ax1, nap
    3. 2096392Domain d3jq9c_: 3jq9 C: [212026]
      automated match to d1p33a_
      complexed with ax1, nap
    4. 2096393Domain d3jq9d_: 3jq9 D: [212027]
      automated match to d1p33a_
      complexed with ax1, nap
  7. Domain(s) for 3jqa:
    1. 2096358Domain d3jqaa_: 3jqa A: [212028]
      automated match to d1p33a_
      complexed with dx4, nap
    2. 2096359Domain d3jqab_: 3jqa B: [212029]
      automated match to d1p33a_
      complexed with dx4, nap
    3. 2096360Domain d3jqac_: 3jqa C: [212030]
      automated match to d1p33a_
      complexed with dx4, nap
    4. 2096361Domain d3jqad_: 3jqa D: [212031]
      automated match to d1p33a_
      complexed with dx4, nap
  8. Domain(s) for 3jqb:
    1. 2096386Domain d3jqba_: 3jqb A: [212032]
      automated match to d1p33a_
      complexed with dtt, dx6, nap
    2. 2096387Domain d3jqbb_: 3jqb B: [212033]
      automated match to d1p33a_
      complexed with dtt, dx6, nap
    3. 2096388Domain d3jqbc_: 3jqb C: [212034]
      automated match to d1p33a_
      complexed with dtt, dx6, nap
    4. 2096389Domain d3jqbd_: 3jqb D: [212035]
      automated match to d1p33a_
      complexed with dtt, dx6, nap
  9. Domain(s) for 3jqc:
    1. 2096362Domain d3jqca_: 3jqc A: [212036]
      automated match to d1p33a_
      complexed with ju2, nap
    2. 2096363Domain d3jqcb_: 3jqc B: [212037]
      automated match to d1p33a_
      complexed with ju2, nap
    3. 2096364Domain d3jqcc_: 3jqc C: [212038]
      automated match to d1p33a_
      complexed with ju2, nap
    4. 2096365Domain d3jqcd_: 3jqc D: [212039]
      automated match to d1p33a_
      complexed with ju2, nap
  10. Domain(s) for 3jqd:
    1. 2096346Domain d3jqda_: 3jqd A: [212040]
      automated match to d1p33a_
      complexed with act, dx7, nap
    2. 2096347Domain d3jqdb_: 3jqd B: [212041]
      automated match to d1p33a_
      complexed with act, dx7, nap
    3. 2096348Domain d3jqdc_: 3jqd C: [212042]
      automated match to d1p33a_
      complexed with act, dx7, nap
    4. 2096349Domain d3jqdd_: 3jqd D: [212043]
      automated match to d1p33a_
      complexed with act, dx7, nap
  11. Domain(s) for 3jqe:
    1. 2096370Domain d3jqea_: 3jqe A: [212044]
      automated match to d1p33a_
      complexed with act, dx8, nap
    2. 2096371Domain d3jqeb_: 3jqe B: [212045]
      automated match to d1p33a_
      complexed with act, dx8, nap
    3. 2096372Domain d3jqec_: 3jqe C: [212046]
      automated match to d1p33a_
      complexed with act, dx8, nap
    4. 2096373Domain d3jqed_: 3jqe D: [212047]
      automated match to d1p33a_
      complexed with act, dx8, nap
  12. Domain(s) for 3jqf:
    1. 2096342Domain d3jqfa_: 3jqf A: [212048]
      automated match to d1p33a_
      complexed with act, ax2, d1d, dtt, gol, nap
    2. 2096343Domain d3jqfb_: 3jqf B: [212049]
      automated match to d1p33a_
      complexed with act, ax2, d1d, dtt, gol, nap
    3. 2096344Domain d3jqfc_: 3jqf C: [212050]
      automated match to d1p33a_
      complexed with act, ax2, d1d, dtt, gol, nap
    4. 2096345Domain d3jqfd_: 3jqf D: [212051]
      automated match to d1p33a_
      complexed with act, ax2, d1d, dtt, gol, nap
  13. Domain(s) for 3jqg:
    1. 2096374Domain d3jqga_: 3jqg A: [212052]
      automated match to d1p33a_
      complexed with ax6, nap
    2. 2096375Domain d3jqgb_: 3jqg B: [212053]
      automated match to d1p33a_
      complexed with ax6, nap
    3. 2096376Domain d3jqgc_: 3jqg C: [212054]
      automated match to d1p33a_
      complexed with ax6, nap
    4. 2096377Domain d3jqgd_: 3jqg D: [212055]
      automated match to d1p33a_
      complexed with ax6, nap
  14. Domain(s) for 5k4q:
    1. 2298175Domain d5k4qd1: 5k4q D:4003-4321 [341476]
      Other proteins in same PDB: d5k4qa2, d5k4qd2
      automated match to d4yrab_
      complexed with gol, nad, so4
    2. 2298176Domain d5k4qc_: 5k4q C: [341477]
      Other proteins in same PDB: d5k4qa2, d5k4qd2
      automated match to d4yrab_
      complexed with gol, nad, so4
    3. 2298177Domain d5k4qf_: 5k4q F: [341478]
      Other proteins in same PDB: d5k4qa2, d5k4qd2
      automated match to d4yrab_
      complexed with gol, nad, so4
    4. 2298178Domain d5k4qa1: 5k4q A:1003-1321 [341479]
      Other proteins in same PDB: d5k4qa2, d5k4qd2
      automated match to d4yrab_
      complexed with gol, nad, so4
    5. 2298237Domain d5k4qe_: 5k4q E: [341538]
      Other proteins in same PDB: d5k4qa2, d5k4qd2
      automated match to d4yrab_
      complexed with gol, nad, so4
    6. 2298262Domain d5k4qb_: 5k4q B: [341563]
      Other proteins in same PDB: d5k4qa2, d5k4qd2
      automated match to d4yrab_
      complexed with gol, nad, so4
  15. Domain(s) for 5k4t:
  16. Domain(s) for 5k4u:
    1. 2298184Domain d5k4ua1: 5k4u A:6003-6321 [341485]
      Other proteins in same PDB: d5k4ua2, d5k4uc2
      automated match to d4yrab_
      complexed with act, gol, nad
    2. 2298188Domain d5k4uc1: 5k4u C:6003-6321 [341489]
      Other proteins in same PDB: d5k4ua2, d5k4uc2
      automated match to d4yrab_
      complexed with act, gol, nad
  17. Domain(s) for 5k4v:
    1. 2298174Domain d5k4vc1: 5k4v C:1003-1321 [341475]
      Other proteins in same PDB: d5k4va2, d5k4vc2
      automated match to d4yrab_
      complexed with act, gol, na, nad
    2. 2298194Domain d5k4va1: 5k4v A:1003-1321 [341495]
      Other proteins in same PDB: d5k4va2, d5k4vc2
      automated match to d4yrab_
      complexed with act, gol, na, nad
  18. Domain(s) for 5k50:
    1. 2298182Domain d5k50e_: 5k50 E: [341483]
      automated match to d4yrab_
      complexed with act, alo, gol, nad
    2. 2298183Domain d5k50j_: 5k50 J: [341484]
      automated match to d4yrab_
      complexed with act, alo, gol, nad
    3. 2298190Domain d5k50a_: 5k50 A: [341491]
      automated match to d4yrab_
      complexed with act, alo, gol, nad
    4. 2298191Domain d5k50c_: 5k50 C: [341492]
      automated match to d4yrab_
      complexed with act, alo, gol, nad
    5. 2298192Domain d5k50i_: 5k50 I: [341493]
      automated match to d4yrab_
      complexed with act, alo, gol, nad
    6. 2298193Domain d5k50g_: 5k50 G: [341494]
      automated match to d4yrab_
      complexed with act, alo, gol, nad
  19. Domain(s) for 5l9a:
    1. 2275515Domain d5l9ab1: 5l9a B:3-321 [318816]
      Other proteins in same PDB: d5l9aa2, d5l9ab2
      automated match to d4yraa_
      complexed with act
    2. 2275517Domain d5l9aa1: 5l9a A:3-321 [318818]
      Other proteins in same PDB: d5l9aa2, d5l9ab2
      automated match to d4yraa_
      complexed with act
  20. Domain(s) for 5lc1:
    1. 2276820Domain d5lc1c1: 5lc1 C:3-321 [320121]
      Other proteins in same PDB: d5lc1a2, d5lc1b2, d5lc1c2, d5lc1d2, d5lc1e2, d5lc1f2
      automated match to d4yraa_
      complexed with act, bme, na, nad, pyr
    2. 2276822Domain d5lc1f1: 5lc1 F:3-319 [320123]
      Other proteins in same PDB: d5lc1a2, d5lc1b2, d5lc1c2, d5lc1d2, d5lc1e2, d5lc1f2
      automated match to d4yraa_
      complexed with act, bme, na, nad, pyr
    3. 2276846Domain d5lc1a1: 5lc1 A:3-321 [320147]
      Other proteins in same PDB: d5lc1a2, d5lc1b2, d5lc1c2, d5lc1d2, d5lc1e2, d5lc1f2
      automated match to d4yraa_
      complexed with act, bme, na, nad, pyr
    4. 2276851Domain d5lc1e1: 5lc1 E:3-321 [320152]
      Other proteins in same PDB: d5lc1a2, d5lc1b2, d5lc1c2, d5lc1d2, d5lc1e2, d5lc1f2
      automated match to d4yraa_
      complexed with act, bme, na, nad, pyr
    5. 2276923Domain d5lc1d1: 5lc1 D:3-321 [320224]
      Other proteins in same PDB: d5lc1a2, d5lc1b2, d5lc1c2, d5lc1d2, d5lc1e2, d5lc1f2
      automated match to d4yraa_
      complexed with act, bme, na, nad, pyr
    6. 2276931Domain d5lc1b1: 5lc1 B:3-321 [320232]
      Other proteins in same PDB: d5lc1a2, d5lc1b2, d5lc1c2, d5lc1d2, d5lc1e2, d5lc1f2
      automated match to d4yraa_
      complexed with act, bme, na, nad, pyr

More info for Species Trypanosome (Trypanosoma brucei) [TaxId:5691] from c.2.1.0 automated matches

Timeline for Species Trypanosome (Trypanosoma brucei) [TaxId:5691] from c.2.1.0 automated matches: