SCOPe 2.08: Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Lineage for Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
Similar in architecture to the superfamily I but partly differs in topology
Family c.94.1.0: automated matches [191309] (1 protein)
not a true family
Protein automated matches [190039] (161 species)
not a true protein
Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [226598] (7 PDB entries)

PDB entries in Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]:

Domain(s) for 4htg:
- Domain d4htga1: 4htg A:10-231 [222740]
  Other proteins in same PDB: d4htga2
  automated match to d1pdaa1
  complexed with 18w, act
Domain(s) for 6r85:
1. Domain d6r85a_: 6r85 A: [416510]
  automated match to d6veaa_
  complexed with edo, glu, na, so4
2. Domain d6r85b_: 6r85 B: [416511]
  automated match to d6veaa_
  complexed with edo, glu, na, so4
Domain(s) for 6r88:
1. Domain d6r88a_: 6r88 A: [378750]
  automated match to d4la9a_
  complexed with cl, gly, gol, na, so4
2. Domain d6r88b_: 6r88 B: [411768]
  automated match to d6veaa_
  complexed with cl, gly, gol, na, so4
3. Domain d6r88c_: 6r88 C: [411769]
  automated match to d6veaa_
  complexed with cl, gly, gol, na, so4
4. Domain d6r88d_: 6r88 D: [378746]
  automated match to d4la9a_
  complexed with cl, gly, gol, na, so4
Domain(s) for 6r89:
1. Domain d6r89a_: 6r89 A: [378763]
  automated match to d4la9a_
  complexed with cl, cys, gol, na
2. Domain d6r89b_: 6r89 B: [411770]
  automated match to d6veaa_
  complexed with cl, cys, gol, na
3. Domain d6r89c_: 6r89 C: [411771]
  automated match to d6veaa_
  complexed with cl, cys, gol, na
4. Domain d6r89d_: 6r89 D: [378744]
  automated match to d4la9a_
  complexed with cl, cys, gol, na
Domain(s) for 6r8a:
1. Domain d6r8aa_: 6r8a A: [411772]
  automated match to d6veaa_
  complexed with met, na, so4
2. Domain d6r8ab_: 6r8a B: [411773]
  automated match to d6veaa_
  complexed with met, na, so4
3. Domain d6r8ac_: 6r8a C: [411774]
  automated match to d6veaa_
  complexed with met, na, so4
4. Domain d6r8ad_: 6r8a D: [378753]
  automated match to d4la9a_
  complexed with met, na, so4
Domain(s) for 6ve8:
- Domain d6ve8a_: 6ve8 A: [392612]
  automated match to d2y7ia_
  complexed with bme, cl, gol, met
Domain(s) for 6vea:
- Domain d6veaa_: 6vea A: [392633]
  automated match to d2y7ia_
  complexed with bme, gly, na

More info for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.94.1.0 automated matches

Timeline for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.94.1.0 automated matches:

Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.94.1.0 automated matches first appeared in SCOPe 2.03
Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.94.1.0 automated matches appears in SCOPe 2.07