Lineage for Species: Agrobacterium tumefaciens [TaxId: 176299]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2086988Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families) (S)
    binds metal ion (magnesium or manganese) in conserved site inside barrel
    N-terminal alpha+beta domain is common to this superfamily
  5. 2087095Family c.1.11.2: D-glucarate dehydratase-like [51609] (15 protein domains)
  6. 2087289Protein automated matches [226997] (13 species)
    not a true protein
  7. 2087298Species Agrobacterium tumefaciens [TaxId:176299] [226506] (6 PDB entries)

PDB entries in Species: Agrobacterium tumefaciens [TaxId: 176299]:

  1. Domain(s) for 3shh:
    1. 2087301Domain d3shha2: 3shh A:127-382 [306498]
      Other proteins in same PDB: d3shha1, d3shha3, d3shhb1, d3shhb3
      automated match to d4hcha2
      complexed with gol, mg, na, peg, tla
    2. 2087302Domain d3shhb2: 3shh B:127-382 [306501]
      Other proteins in same PDB: d3shha1, d3shha3, d3shhb1, d3shhb3
      automated match to d4hcha2
      complexed with gol, mg, na, peg, tla
  2. Domain(s) for 3tu2:
    1. 2087307Domain d3tu2a2: 3tu2 A:127-382 [306595]
      Other proteins in same PDB: d3tu2a1, d3tu2a3, d3tu2b1, d3tu2b3
      automated match to d4hcha2
      complexed with llh, mg
    2. 2087308Domain d3tu2b2: 3tu2 B:127-382 [306598]
      Other proteins in same PDB: d3tu2a1, d3tu2a3, d3tu2b1, d3tu2b3
      automated match to d4hcha2
      complexed with llh, mg
  3. Domain(s) for 4hcd:
  4. Domain(s) for 4hch:
    1. 2087299Domain d4hcha2: 4hch A:127-382 [222499]
      Other proteins in same PDB: d4hcha1, d4hcha3, d4hchb1, d4hchb3
      automated match to d1rvka1
      complexed with edo, gol, mg, na, pge, tla
    2. 2087300Domain d4hchb2: 4hch B:127-382 [222501]
      Other proteins in same PDB: d4hcha1, d4hcha3, d4hchb1, d4hchb3
      automated match to d1rvka1
      complexed with edo, gol, mg, na, pge, tla
  5. Domain(s) for 4hcl:
    1. 2087305Domain d4hcla2: 4hcl A:127-382 [222503]
      Other proteins in same PDB: d4hcla1, d4hcla3, d4hclb1, d4hclb3
      automated match to d1rvka1
      complexed with llh, mg, pg4
    2. 2087306Domain d4hclb2: 4hcl B:127-382 [222505]
      Other proteins in same PDB: d4hcla1, d4hcla3, d4hclb1, d4hclb3
      automated match to d1rvka1
      complexed with llh, mg, pg4
  6. Domain(s) for 4mmw:
    1. 2087303Domain d4mmwa2: 4mmw A:127-381 [235678]
      Other proteins in same PDB: d4mmwa1, d4mmwb1
      automated match to d4mmwb2
      complexed with cl, llh, mg, pge, xyh
    2. 2087304Domain d4mmwb2: 4mmw B:127-381 [228012]
      Other proteins in same PDB: d4mmwa1, d4mmwb1
      automated match to d4hcha2
      complexed with cl, llh, mg, pge, xyh

More info for Species Agrobacterium tumefaciens [TaxId:176299] from c.1.11.2 automated matches

Timeline for Species Agrobacterium tumefaciens [TaxId:176299] from c.1.11.2 automated matches: