Lineage for Species: Hepatitis C virus subtype 1a [TaxId: 31646]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2387558Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 2387559Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) (S)
  5. 2389767Family b.47.1.3: Viral proteases [50596] (5 protein domains)
    beta sheet in the first domain is opened rather than forms a barrel
  6. 2389857Protein automated matches [190658] (7 species)
    not a true protein
  7. 2389866Species Hepatitis C virus subtype 1a [TaxId:31646] [226463] (20 PDB entries)

PDB entries in Species: Hepatitis C virus subtype 1a [TaxId: 31646]:

  1. Domain(s) for 3su0:
  2. Domain(s) for 3su1:
  3. Domain(s) for 3su2:
  4. Domain(s) for 3su3:
  5. Domain(s) for 3su5:
  6. Domain(s) for 3su6:
  7. Domain(s) for 3sud:
    1. 2389881Domain d3suda_: 3sud A: [265371]
      automated match to d3sv6a_
      complexed with so4, sue, zn
    2. 2389882Domain d3sudb_: 3sud B: [265372]
      automated match to d3sv6a_
      complexed with so4, sue, zn
    3. 2389883Domain d3sudc_: 3sud C: [265373]
      automated match to d3sv6a_
      complexed with so4, sue, zn
    4. 2389884Domain d3sudd_: 3sud D: [265374]
      automated match to d3sv6a_
      complexed with so4, sue, zn
  8. Domain(s) for 3sue:
    1. 2389887Domain d3suea_: 3sue A: [233636]
      automated match to d3sv8a_
      complexed with sue, zn
    2. 2389888Domain d3sueb_: 3sue B: [239775]
      automated match to d3suea_
      complexed with sue, zn
    3. 2389889Domain d3suec_: 3sue C: [239776]
      automated match to d3suea_
      complexed with sue, zn
    4. 2389890Domain d3sued_: 3sue D: [239777]
      automated match to d3suea_
      complexed with sue, zn
  9. Domain(s) for 3suf:
    1. 2389891Domain d3sufa_: 3suf A: [233637]
      automated match to d3sv8a_
      complexed with so4, sue, zn
    2. 2389892Domain d3sufb_: 3suf B: [239778]
      automated match to d3sufa_
      complexed with so4, sue, zn
    3. 2389893Domain d3sufc_: 3suf C: [239779]
      automated match to d3sufa_
      complexed with so4, sue, zn
    4. 2389894Domain d3sufd_: 3suf D: [239780]
      automated match to d3sufa_
      complexed with so4, sue, zn
  10. Domain(s) for 3sug:
  11. Domain(s) for 3sv6:
  12. Domain(s) for 3sv7:
  13. Domain(s) for 3sv8:
  14. Domain(s) for 3sv9:
  15. Domain(s) for 4nwk:
  16. Domain(s) for 4nwl:
    1. 2389885Domain d4nwla1: 4nwl A:-10-182 [254029]
      Other proteins in same PDB: d4nwla2, d4nwlb2
      automated match to d4nwka_
      complexed with 2r9, zn
    2. 2389886Domain d4nwlb1: 4nwl B:-10-182 [254030]
      Other proteins in same PDB: d4nwla2, d4nwlb2
      automated match to d4nwka_
      complexed with 2r9, zn
  17. Domain(s) for 4wh6:
  18. Domain(s) for 4wh8:
    1. 2389896Domain d4wh8a1: 4wh8 A:1004-1179 [260466]
      Other proteins in same PDB: d4wh8a2, d4wh8b2
      automated match to d3m5la_
      complexed with 3m7, so4, zn
    2. 2389897Domain d4wh8b1: 4wh8 B:1004-1179 [261475]
      Other proteins in same PDB: d4wh8a2, d4wh8b2
      automated match to d3m5la_
      complexed with 3m7, so4, zn
  19. Domain(s) for 5voj:
  20. Domain(s) for 5vp9:

More info for Species Hepatitis C virus subtype 1a [TaxId:31646] from b.47.1.3 automated matches

Timeline for Species Hepatitis C virus subtype 1a [TaxId:31646] from b.47.1.3 automated matches: