Lineage for Species: Merkel cell polyomavirus [TaxId: 493803]

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1812227Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 1813264Superfamily b.121.6: Group I dsDNA viruses [88648] (2 families) (S)
  5. 1813265Family b.121.6.1: Papovaviridae-like VP [88649] (3 proteins)
  6. 1813335Protein automated matches [191200] (6 species)
    not a true protein
  7. 1813480Species Merkel cell polyomavirus [TaxId:493803] [226460] (4 PDB entries)

PDB entries in Species: Merkel cell polyomavirus [TaxId: 493803]:

  1. Domain(s) for 4fmg:
    1. 1813521Domain d4fmga_: 4fmg A: [221283]
      automated match to d1vpsb_
      complexed with cl, gol
    2. 1813522Domain d4fmgb_: 4fmg B: [221284]
      automated match to d1vpsb_
      complexed with cl, gol
    3. 1813523Domain d4fmgc_: 4fmg C: [221285]
      automated match to d1vpsb_
      complexed with cl, gol
    4. 1813524Domain d4fmgd_: 4fmg D: [221286]
      automated match to d1vpsb_
      complexed with cl, gol
    5. 1813525Domain d4fmge_: 4fmg E: [221287]
      automated match to d1vpsb_
      complexed with cl, gol
    6. 1813526Domain d4fmgf_: 4fmg F: [221288]
      automated match to d1vpsb_
      complexed with cl, gol
    7. 1813527Domain d4fmgg_: 4fmg G: [221289]
      automated match to d1vpsb_
      complexed with cl, gol
    8. 1813528Domain d4fmgh_: 4fmg H: [221290]
      automated match to d1vpsb_
      complexed with cl, gol
    9. 1813529Domain d4fmgi_: 4fmg I: [221291]
      automated match to d1vpsb_
      complexed with cl, gol
    10. 1813530Domain d4fmgj_: 4fmg J: [221292]
      automated match to d1vpsb_
      complexed with cl, gol
    11. 1813531Domain d4fmgk_: 4fmg K: [221293]
      automated match to d1vpsb_
      complexed with cl, gol
    12. 1813532Domain d4fmgl_: 4fmg L: [221294]
      automated match to d1vpsb_
      complexed with cl, gol
    13. 1813533Domain d4fmgm_: 4fmg M: [221295]
      automated match to d1vpsb_
      complexed with cl, gol
    14. 1813534Domain d4fmgn_: 4fmg N: [221296]
      automated match to d1vpsb_
      complexed with cl, gol
    15. 1813535Domain d4fmgo_: 4fmg O: [221297]
      automated match to d1vpsb_
      complexed with cl, gol
    16. 1813536Domain d4fmgp_: 4fmg P: [221298]
      automated match to d1vpsb_
      complexed with cl, gol
    17. 1813537Domain d4fmgq_: 4fmg Q: [221299]
      automated match to d1vpsb_
      complexed with cl, gol
    18. 1813538Domain d4fmgr_: 4fmg R: [221300]
      automated match to d1vpsb_
      complexed with cl, gol
    19. 1813539Domain d4fmgs_: 4fmg S: [221301]
      automated match to d1vpsb_
      complexed with cl, gol
    20. 1813540Domain d4fmgt_: 4fmg T: [221302]
      automated match to d1vpsb_
      complexed with cl, gol
  2. Domain(s) for 4fmh:
    1. 1813501Domain d4fmha_: 4fmh A: [221303]
      automated match to d1vpsb_
      complexed with cl, gol
    2. 1813502Domain d4fmhb_: 4fmh B: [221304]
      automated match to d1vpsb_
      complexed with cl, gol
    3. 1813503Domain d4fmhc_: 4fmh C: [221305]
      automated match to d1vpsb_
      complexed with cl, gol
    4. 1813504Domain d4fmhd_: 4fmh D: [221306]
      automated match to d1vpsb_
      complexed with cl, gol
    5. 1813505Domain d4fmhe_: 4fmh E: [221307]
      automated match to d1vpsb_
      complexed with cl, gol
    6. 1813506Domain d4fmhf_: 4fmh F: [221308]
      automated match to d1vpsb_
      complexed with cl, gol
    7. 1813507Domain d4fmhg_: 4fmh G: [221309]
      automated match to d1vpsb_
      complexed with cl, gol
    8. 1813508Domain d4fmhh_: 4fmh H: [221310]
      automated match to d1vpsb_
      complexed with cl, gol
    9. 1813509Domain d4fmhi_: 4fmh I: [221311]
      automated match to d1vpsb_
      complexed with cl, gol
    10. 1813510Domain d4fmhj_: 4fmh J: [221312]
      automated match to d1vpsb_
      complexed with cl, gol
    11. 1813511Domain d4fmhk_: 4fmh K: [221313]
      automated match to d1vpsb_
      complexed with cl, gol
    12. 1813512Domain d4fmhl_: 4fmh L: [221314]
      automated match to d1vpsb_
      complexed with cl, gol
    13. 1813513Domain d4fmhm_: 4fmh M: [221315]
      automated match to d1vpsb_
      complexed with cl, gol
    14. 1813514Domain d4fmhn_: 4fmh N: [221316]
      automated match to d1vpsb_
      complexed with cl, gol
    15. 1813515Domain d4fmho_: 4fmh O: [221317]
      automated match to d1vpsb_
      complexed with cl, gol
    16. 1813516Domain d4fmhp_: 4fmh P: [221318]
      automated match to d1vpsb_
      complexed with cl, gol
    17. 1813517Domain d4fmhq_: 4fmh Q: [221319]
      automated match to d1vpsb_
      complexed with cl, gol
    18. 1813518Domain d4fmhr_: 4fmh R: [221320]
      automated match to d1vpsb_
      complexed with cl, gol
    19. 1813519Domain d4fmhs_: 4fmh S: [221321]
      automated match to d1vpsb_
      complexed with cl, gol
    20. 1813520Domain d4fmht_: 4fmh T: [221322]
      automated match to d1vpsb_
      complexed with cl, gol
  3. Domain(s) for 4fmi:
    1. 1813481Domain d4fmia_: 4fmi A: [221323]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    2. 1813482Domain d4fmib_: 4fmi B: [221324]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    3. 1813483Domain d4fmic_: 4fmi C: [221325]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    4. 1813484Domain d4fmid_: 4fmi D: [221326]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    5. 1813485Domain d4fmie_: 4fmi E: [221327]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    6. 1813486Domain d4fmif_: 4fmi F: [221328]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    7. 1813487Domain d4fmig_: 4fmi G: [221329]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    8. 1813488Domain d4fmih_: 4fmi H: [221330]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    9. 1813489Domain d4fmii_: 4fmi I: [221331]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    10. 1813490Domain d4fmij_: 4fmi J: [221332]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    11. 1813491Domain d4fmik_: 4fmi K: [221333]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    12. 1813492Domain d4fmil_: 4fmi L: [221334]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    13. 1813493Domain d4fmim_: 4fmi M: [221335]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    14. 1813494Domain d4fmin_: 4fmi N: [221336]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    15. 1813495Domain d4fmio_: 4fmi O: [221337]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    16. 1813496Domain d4fmip_: 4fmi P: [221338]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    17. 1813497Domain d4fmiq_: 4fmi Q: [221339]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    18. 1813498Domain d4fmir_: 4fmi R: [221340]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    19. 1813499Domain d4fmis_: 4fmi S: [221341]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    20. 1813500Domain d4fmit_: 4fmi T: [221342]
      automated match to d1vpsb_
      complexed with cl, gol, sia
  4. Domain(s) for 4fmj:
    1. 1813541Domain d4fmja_: 4fmj A: [221343]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    2. 1813542Domain d4fmjb_: 4fmj B: [221344]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    3. 1813543Domain d4fmjc_: 4fmj C: [221345]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    4. 1813544Domain d4fmjd_: 4fmj D: [221346]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    5. 1813545Domain d4fmje_: 4fmj E: [221347]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    6. 1813546Domain d4fmjf_: 4fmj F: [221348]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    7. 1813547Domain d4fmjg_: 4fmj G: [221349]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    8. 1813548Domain d4fmjh_: 4fmj H: [221350]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    9. 1813549Domain d4fmji_: 4fmj I: [221351]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    10. 1813550Domain d4fmjj_: 4fmj J: [221352]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    11. 1813551Domain d4fmjk_: 4fmj K: [221353]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    12. 1813552Domain d4fmjl_: 4fmj L: [221354]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    13. 1813553Domain d4fmjm_: 4fmj M: [221355]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    14. 1813554Domain d4fmjn_: 4fmj N: [221356]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    15. 1813555Domain d4fmjo_: 4fmj O: [221357]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    16. 1813556Domain d4fmjp_: 4fmj P: [221358]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    17. 1813557Domain d4fmjq_: 4fmj Q: [221359]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    18. 1813558Domain d4fmjr_: 4fmj R: [221360]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    19. 1813559Domain d4fmjs_: 4fmj S: [221361]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    20. 1813560Domain d4fmjt_: 4fmj T: [221362]
      automated match to d1vpsb_
      complexed with cl, gol, sia

More info for Species Merkel cell polyomavirus [TaxId:493803] from b.121.6.1 automated matches

Timeline for Species Merkel cell polyomavirus [TaxId:493803] from b.121.6.1 automated matches: