Lineage for Species: Merkel cell polyomavirus [TaxId: 493803]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2076457Superfamily b.121.6: Group I dsDNA viruses [88648] (2 families) (S)
  5. 2076458Family b.121.6.1: Papovaviridae-like VP [88649] (3 protein domains)
  6. 2076528Protein automated matches [191200] (7 species)
    not a true protein
  7. 2076673Species Merkel cell polyomavirus [TaxId:493803] [226460] (4 PDB entries)

PDB entries in Species: Merkel cell polyomavirus [TaxId: 493803]:

  1. Domain(s) for 4fmg:
    1. 2076714Domain d4fmga_: 4fmg A: [221283]
      automated match to d1vpsb_
      complexed with cl, gol
    2. 2076715Domain d4fmgb_: 4fmg B: [221284]
      automated match to d1vpsb_
      complexed with cl, gol
    3. 2076716Domain d4fmgc_: 4fmg C: [221285]
      automated match to d1vpsb_
      complexed with cl, gol
    4. 2076717Domain d4fmgd_: 4fmg D: [221286]
      automated match to d1vpsb_
      complexed with cl, gol
    5. 2076718Domain d4fmge_: 4fmg E: [221287]
      automated match to d1vpsb_
      complexed with cl, gol
    6. 2076719Domain d4fmgf_: 4fmg F: [221288]
      automated match to d1vpsb_
      complexed with cl, gol
    7. 2076720Domain d4fmgg_: 4fmg G: [221289]
      automated match to d1vpsb_
      complexed with cl, gol
    8. 2076721Domain d4fmgh_: 4fmg H: [221290]
      automated match to d1vpsb_
      complexed with cl, gol
    9. 2076722Domain d4fmgi_: 4fmg I: [221291]
      automated match to d1vpsb_
      complexed with cl, gol
    10. 2076723Domain d4fmgj_: 4fmg J: [221292]
      automated match to d1vpsb_
      complexed with cl, gol
    11. 2076724Domain d4fmgk_: 4fmg K: [221293]
      automated match to d1vpsb_
      complexed with cl, gol
    12. 2076725Domain d4fmgl_: 4fmg L: [221294]
      automated match to d1vpsb_
      complexed with cl, gol
    13. 2076726Domain d4fmgm_: 4fmg M: [221295]
      automated match to d1vpsb_
      complexed with cl, gol
    14. 2076727Domain d4fmgn_: 4fmg N: [221296]
      automated match to d1vpsb_
      complexed with cl, gol
    15. 2076728Domain d4fmgo_: 4fmg O: [221297]
      automated match to d1vpsb_
      complexed with cl, gol
    16. 2076729Domain d4fmgp_: 4fmg P: [221298]
      automated match to d1vpsb_
      complexed with cl, gol
    17. 2076730Domain d4fmgq_: 4fmg Q: [221299]
      automated match to d1vpsb_
      complexed with cl, gol
    18. 2076731Domain d4fmgr_: 4fmg R: [221300]
      automated match to d1vpsb_
      complexed with cl, gol
    19. 2076732Domain d4fmgs_: 4fmg S: [221301]
      automated match to d1vpsb_
      complexed with cl, gol
    20. 2076733Domain d4fmgt_: 4fmg T: [221302]
      automated match to d1vpsb_
      complexed with cl, gol
  2. Domain(s) for 4fmh:
    1. 2076694Domain d4fmha_: 4fmh A: [221303]
      automated match to d1vpsb_
      complexed with cl, gol
    2. 2076695Domain d4fmhb_: 4fmh B: [221304]
      automated match to d1vpsb_
      complexed with cl, gol
    3. 2076696Domain d4fmhc_: 4fmh C: [221305]
      automated match to d1vpsb_
      complexed with cl, gol
    4. 2076697Domain d4fmhd_: 4fmh D: [221306]
      automated match to d1vpsb_
      complexed with cl, gol
    5. 2076698Domain d4fmhe_: 4fmh E: [221307]
      automated match to d1vpsb_
      complexed with cl, gol
    6. 2076699Domain d4fmhf_: 4fmh F: [221308]
      automated match to d1vpsb_
      complexed with cl, gol
    7. 2076700Domain d4fmhg_: 4fmh G: [221309]
      automated match to d1vpsb_
      complexed with cl, gol
    8. 2076701Domain d4fmhh_: 4fmh H: [221310]
      automated match to d1vpsb_
      complexed with cl, gol
    9. 2076702Domain d4fmhi_: 4fmh I: [221311]
      automated match to d1vpsb_
      complexed with cl, gol
    10. 2076703Domain d4fmhj_: 4fmh J: [221312]
      automated match to d1vpsb_
      complexed with cl, gol
    11. 2076704Domain d4fmhk_: 4fmh K: [221313]
      automated match to d1vpsb_
      complexed with cl, gol
    12. 2076705Domain d4fmhl_: 4fmh L: [221314]
      automated match to d1vpsb_
      complexed with cl, gol
    13. 2076706Domain d4fmhm_: 4fmh M: [221315]
      automated match to d1vpsb_
      complexed with cl, gol
    14. 2076707Domain d4fmhn_: 4fmh N: [221316]
      automated match to d1vpsb_
      complexed with cl, gol
    15. 2076708Domain d4fmho_: 4fmh O: [221317]
      automated match to d1vpsb_
      complexed with cl, gol
    16. 2076709Domain d4fmhp_: 4fmh P: [221318]
      automated match to d1vpsb_
      complexed with cl, gol
    17. 2076710Domain d4fmhq_: 4fmh Q: [221319]
      automated match to d1vpsb_
      complexed with cl, gol
    18. 2076711Domain d4fmhr_: 4fmh R: [221320]
      automated match to d1vpsb_
      complexed with cl, gol
    19. 2076712Domain d4fmhs_: 4fmh S: [221321]
      automated match to d1vpsb_
      complexed with cl, gol
    20. 2076713Domain d4fmht_: 4fmh T: [221322]
      automated match to d1vpsb_
      complexed with cl, gol
  3. Domain(s) for 4fmi:
    1. 2076674Domain d4fmia_: 4fmi A: [221323]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    2. 2076675Domain d4fmib_: 4fmi B: [221324]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    3. 2076676Domain d4fmic_: 4fmi C: [221325]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    4. 2076677Domain d4fmid_: 4fmi D: [221326]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    5. 2076678Domain d4fmie_: 4fmi E: [221327]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    6. 2076679Domain d4fmif_: 4fmi F: [221328]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    7. 2076680Domain d4fmig_: 4fmi G: [221329]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    8. 2076681Domain d4fmih_: 4fmi H: [221330]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    9. 2076682Domain d4fmii_: 4fmi I: [221331]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    10. 2076683Domain d4fmij_: 4fmi J: [221332]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    11. 2076684Domain d4fmik_: 4fmi K: [221333]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    12. 2076685Domain d4fmil_: 4fmi L: [221334]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    13. 2076686Domain d4fmim_: 4fmi M: [221335]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    14. 2076687Domain d4fmin_: 4fmi N: [221336]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    15. 2076688Domain d4fmio_: 4fmi O: [221337]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    16. 2076689Domain d4fmip_: 4fmi P: [221338]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    17. 2076690Domain d4fmiq_: 4fmi Q: [221339]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    18. 2076691Domain d4fmir_: 4fmi R: [221340]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    19. 2076692Domain d4fmis_: 4fmi S: [221341]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    20. 2076693Domain d4fmit_: 4fmi T: [221342]
      automated match to d1vpsb_
      complexed with cl, gol, sia
  4. Domain(s) for 4fmj:
    1. 2076734Domain d4fmja_: 4fmj A: [221343]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    2. 2076735Domain d4fmjb_: 4fmj B: [221344]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    3. 2076736Domain d4fmjc_: 4fmj C: [221345]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    4. 2076737Domain d4fmjd_: 4fmj D: [221346]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    5. 2076738Domain d4fmje_: 4fmj E: [221347]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    6. 2076739Domain d4fmjf_: 4fmj F: [221348]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    7. 2076740Domain d4fmjg_: 4fmj G: [221349]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    8. 2076741Domain d4fmjh_: 4fmj H: [221350]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    9. 2076742Domain d4fmji_: 4fmj I: [221351]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    10. 2076743Domain d4fmjj_: 4fmj J: [221352]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    11. 2076744Domain d4fmjk_: 4fmj K: [221353]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    12. 2076745Domain d4fmjl_: 4fmj L: [221354]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    13. 2076746Domain d4fmjm_: 4fmj M: [221355]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    14. 2076747Domain d4fmjn_: 4fmj N: [221356]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    15. 2076748Domain d4fmjo_: 4fmj O: [221357]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    16. 2076749Domain d4fmjp_: 4fmj P: [221358]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    17. 2076750Domain d4fmjq_: 4fmj Q: [221359]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    18. 2076751Domain d4fmjr_: 4fmj R: [221360]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    19. 2076752Domain d4fmjs_: 4fmj S: [221361]
      automated match to d1vpsb_
      complexed with cl, gol, sia
    20. 2076753Domain d4fmjt_: 4fmj T: [221362]
      automated match to d1vpsb_
      complexed with cl, gol, sia

More info for Species Merkel cell polyomavirus [TaxId:493803] from b.121.6.1 automated matches

Timeline for Species Merkel cell polyomavirus [TaxId:493803] from b.121.6.1 automated matches: