Lineage for Species: Clarkia breweri [TaxId: 36903]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1982196Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families) (S)
    contains a small beta-sheet (wing)
  5. 1983660Family a.4.5.0: automated matches [191329] (1 protein)
    not a true family
  6. 1983661Protein automated matches [190154] (68 species)
    not a true protein
  7. 1983701Species Clarkia breweri [TaxId:36903] [226317] (5 PDB entries)

PDB entries in Species: Clarkia breweri [TaxId: 36903]:

  1. Domain(s) for 3reo:
    1. 1983702Domain d3reoa1: 3reo A:17-122 [215776]
      Other proteins in same PDB: d3reoa2, d3reob2, d3reoc2, d3reod2
      automated match to d1kyze1
      complexed with eug, sah
    2. 1983703Domain d3reob1: 3reo B:16-122 [215778]
      Other proteins in same PDB: d3reoa2, d3reob2, d3reoc2, d3reod2
      automated match to d1kyze1
      complexed with eug, sah
    3. 1983704Domain d3reoc1: 3reo C:8-122 [233442]
      Other proteins in same PDB: d3reoa2, d3reob2, d3reoc2, d3reod2
      automated match to d3tkyd1
      complexed with eug, sah
    4. 1983705Domain d3reod1: 3reo D:9-122 [233440]
      Other proteins in same PDB: d3reoa2, d3reob2, d3reoc2, d3reod2
      automated match to d3tkyd1
      complexed with eug, sah
  2. Domain(s) for 3tky:
    1. 1983716Domain d3tkya1: 3tky A:16-122 [216857]
      Other proteins in same PDB: d3tkya2, d3tkyb2, d3tkyc2, d3tkyd2
      automated match to d1kyze1
      complexed with n7i, sah
    2. 1983717Domain d3tkyb1: 3tky B:9-122 [216859]
      Other proteins in same PDB: d3tkya2, d3tkyb2, d3tkyc2, d3tkyd2
      automated match to d1kyze1
      complexed with n7i, sah
    3. 1983718Domain d3tkyc1: 3tky C:16-122 [216861]
      Other proteins in same PDB: d3tkya2, d3tkyb2, d3tkyc2, d3tkyd2
      automated match to d1kyze1
      complexed with n7i, sah
    4. 1983719Domain d3tkyd1: 3tky D:9-122 [216863]
      Other proteins in same PDB: d3tkya2, d3tkyb2, d3tkyc2, d3tkyd2
      automated match to d1kyze1
      complexed with n7i, sah
  3. Domain(s) for 5cvj:
    1. 1983708Domain d5cvja1: 5cvj A:7-122 [276893]
      Other proteins in same PDB: d5cvja2, d5cvjb2, d5cvjc2, d5cvjd2
      automated match to d1kyze1
      complexed with n7i, no3, sah
    2. 1983709Domain d5cvjb1: 5cvj B:15-122 [276897]
      Other proteins in same PDB: d5cvja2, d5cvjb2, d5cvjc2, d5cvjd2
      automated match to d1kyze1
      complexed with n7i, no3, sah
    3. 1983710Domain d5cvjc1: 5cvj C:13-122 [276895]
      Other proteins in same PDB: d5cvja2, d5cvjb2, d5cvjc2, d5cvjd2
      automated match to d1kyze1
      complexed with n7i, no3, sah
    4. 1983711Domain d5cvjd1: 5cvj D:8-122 [276899]
      Other proteins in same PDB: d5cvja2, d5cvjb2, d5cvjc2, d5cvjd2
      automated match to d1kyze1
      complexed with n7i, no3, sah
  4. Domain(s) for 5cvu:
    1. 1983712Domain d5cvua1: 5cvu A:15-122 [276903]
      Other proteins in same PDB: d5cvua2, d5cvub2, d5cvuc2, d5cvud2
      automated match to d1kyze1
      complexed with 55b, no3, sah
    2. 1983713Domain d5cvub1: 5cvu B:9-122 [276901]
      Other proteins in same PDB: d5cvua2, d5cvub2, d5cvuc2, d5cvud2
      automated match to d1kyze1
      complexed with 55b, no3, sah
    3. 1983714Domain d5cvuc1: 5cvu C:15-122 [276907]
      Other proteins in same PDB: d5cvua2, d5cvub2, d5cvuc2, d5cvud2
      automated match to d1kyze1
      complexed with 55b, no3, sah
    4. 1983715Domain d5cvud1: 5cvu D:8-122 [276905]
      Other proteins in same PDB: d5cvua2, d5cvub2, d5cvuc2, d5cvud2
      automated match to d1kyze1
      complexed with 55b, no3, sah
  5. Domain(s) for 5cvv:
    1. 1983706Domain d5cvva1: 5cvv A:16-122 [276891]
      Other proteins in same PDB: d5cvva2, d5cvvb2
      automated match to d1kyze1
      complexed with n7i, sah
    2. 1983707Domain d5cvvb1: 5cvv B:16-122 [276889]
      Other proteins in same PDB: d5cvva2, d5cvvb2
      automated match to d1kyze1
      complexed with n7i, sah

More info for Species Clarkia breweri [TaxId:36903] from a.4.5.0 automated matches

Timeline for Species Clarkia breweri [TaxId:36903] from a.4.5.0 automated matches: