Lineage for Species: Thermococcus kodakaraensis [TaxId: 69014]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2175267Superfamily d.58.9: RuBisCO, large subunit, small (N-terminal) domain [54966] (2 families) (S)
    C-terminal domain is beta/alpha barrel
  5. 2175463Family d.58.9.0: automated matches [227234] (1 protein)
    not a true family
  6. 2175464Protein automated matches [226983] (18 species)
    not a true protein
  7. 2175611Species Thermococcus kodakaraensis [TaxId:69014] [225982] (2 PDB entries)

PDB entries in Species: Thermococcus kodakaraensis [TaxId: 69014]:

  1. Domain(s) for 3kdn:
    1. 2175612Domain d3kdna1: 3kdn A:8-135 [212303]
      Other proteins in same PDB: d3kdna2, d3kdnb2, d3kdnc2, d3kdnd2, d3kdne2, d3kdnf2, d3kdng2, d3kdnh2, d3kdni2, d3kdnj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    2. 2175613Domain d3kdnb1: 3kdn B:8-135 [212305]
      Other proteins in same PDB: d3kdna2, d3kdnb2, d3kdnc2, d3kdnd2, d3kdne2, d3kdnf2, d3kdng2, d3kdnh2, d3kdni2, d3kdnj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    3. 2175614Domain d3kdnc1: 3kdn C:8-135 [212307]
      Other proteins in same PDB: d3kdna2, d3kdnb2, d3kdnc2, d3kdnd2, d3kdne2, d3kdnf2, d3kdng2, d3kdnh2, d3kdni2, d3kdnj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    4. 2175615Domain d3kdnd1: 3kdn D:8-135 [212309]
      Other proteins in same PDB: d3kdna2, d3kdnb2, d3kdnc2, d3kdnd2, d3kdne2, d3kdnf2, d3kdng2, d3kdnh2, d3kdni2, d3kdnj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    5. 2175616Domain d3kdne1: 3kdn E:7-135 [212311]
      Other proteins in same PDB: d3kdna2, d3kdnb2, d3kdnc2, d3kdnd2, d3kdne2, d3kdnf2, d3kdng2, d3kdnh2, d3kdni2, d3kdnj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    6. 2175617Domain d3kdnf1: 3kdn F:8-135 [212313]
      Other proteins in same PDB: d3kdna2, d3kdnb2, d3kdnc2, d3kdnd2, d3kdne2, d3kdnf2, d3kdng2, d3kdnh2, d3kdni2, d3kdnj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    7. 2175618Domain d3kdng1: 3kdn G:8-135 [212315]
      Other proteins in same PDB: d3kdna2, d3kdnb2, d3kdnc2, d3kdnd2, d3kdne2, d3kdnf2, d3kdng2, d3kdnh2, d3kdni2, d3kdnj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    8. 2175619Domain d3kdnh1: 3kdn H:7-135 [212317]
      Other proteins in same PDB: d3kdna2, d3kdnb2, d3kdnc2, d3kdnd2, d3kdne2, d3kdnf2, d3kdng2, d3kdnh2, d3kdni2, d3kdnj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    9. 2175620Domain d3kdni1: 3kdn I:9-135 [212319]
      Other proteins in same PDB: d3kdna2, d3kdnb2, d3kdnc2, d3kdnd2, d3kdne2, d3kdnf2, d3kdng2, d3kdnh2, d3kdni2, d3kdnj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    10. 2175621Domain d3kdnj1: 3kdn J:8-135 [212321]
      Other proteins in same PDB: d3kdna2, d3kdnb2, d3kdnc2, d3kdnd2, d3kdne2, d3kdnf2, d3kdng2, d3kdnh2, d3kdni2, d3kdnj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
  2. Domain(s) for 3kdo:
    1. 2175622Domain d3kdoa1: 3kdo A:9-135 [212323]
      Other proteins in same PDB: d3kdoa2, d3kdob2, d3kdoc2, d3kdod2, d3kdoe2, d3kdof2, d3kdog2, d3kdoh2, d3kdoi2, d3kdoj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    2. 2175623Domain d3kdob1: 3kdo B:7-135 [212325]
      Other proteins in same PDB: d3kdoa2, d3kdob2, d3kdoc2, d3kdod2, d3kdoe2, d3kdof2, d3kdog2, d3kdoh2, d3kdoi2, d3kdoj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    3. 2175624Domain d3kdoc1: 3kdo C:5-135 [212327]
      Other proteins in same PDB: d3kdoa2, d3kdob2, d3kdoc2, d3kdod2, d3kdoe2, d3kdof2, d3kdog2, d3kdoh2, d3kdoi2, d3kdoj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    4. 2175625Domain d3kdod1: 3kdo D:8-135 [212329]
      Other proteins in same PDB: d3kdoa2, d3kdob2, d3kdoc2, d3kdod2, d3kdoe2, d3kdof2, d3kdog2, d3kdoh2, d3kdoi2, d3kdoj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    5. 2175626Domain d3kdoe1: 3kdo E:5-135 [212331]
      Other proteins in same PDB: d3kdoa2, d3kdob2, d3kdoc2, d3kdod2, d3kdoe2, d3kdof2, d3kdog2, d3kdoh2, d3kdoi2, d3kdoj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    6. 2175627Domain d3kdof1: 3kdo F:8-135 [212333]
      Other proteins in same PDB: d3kdoa2, d3kdob2, d3kdoc2, d3kdod2, d3kdoe2, d3kdof2, d3kdog2, d3kdoh2, d3kdoi2, d3kdoj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    7. 2175628Domain d3kdog1: 3kdo G:8-135 [212335]
      Other proteins in same PDB: d3kdoa2, d3kdob2, d3kdoc2, d3kdod2, d3kdoe2, d3kdof2, d3kdog2, d3kdoh2, d3kdoi2, d3kdoj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    8. 2175629Domain d3kdoh1: 3kdo H:7-135 [212337]
      Other proteins in same PDB: d3kdoa2, d3kdob2, d3kdoc2, d3kdod2, d3kdoe2, d3kdof2, d3kdog2, d3kdoh2, d3kdoi2, d3kdoj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    9. 2175630Domain d3kdoi1: 3kdo I:7-135 [212339]
      Other proteins in same PDB: d3kdoa2, d3kdob2, d3kdoc2, d3kdod2, d3kdoe2, d3kdof2, d3kdog2, d3kdoh2, d3kdoi2, d3kdoj2
      automated match to d1bxna2
      complexed with cap, mg; mutant
    10. 2175631Domain d3kdoj1: 3kdo J:7-135 [212341]
      Other proteins in same PDB: d3kdoa2, d3kdob2, d3kdoc2, d3kdod2, d3kdoe2, d3kdof2, d3kdog2, d3kdoh2, d3kdoi2, d3kdoj2
      automated match to d1bxna2
      complexed with cap, mg; mutant

More info for Species Thermococcus kodakaraensis [TaxId:69014] from d.58.9.0 automated matches

Timeline for Species Thermococcus kodakaraensis [TaxId:69014] from d.58.9.0 automated matches: