SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Klebsiella pneumoniae [TaxId: 272620]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2137471Fold c.72: Ribokinase-like [53612] (3 superfamilies)
    core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
    potential superfamily: members of this fold have similar functions but different ATP-binding sites
  4. 2137472Superfamily c.72.1: Ribokinase-like [53613] (6 families) (S)
    has extra strand located between strands 2 and 3
  5. 2137707Family c.72.1.0: automated matches [191321] (1 protein)
    not a true family
  6. 2137708Protein automated matches [190117] (40 species)
    not a true protein
  7. 2137803Species Klebsiella pneumoniae [TaxId:272620] [225726] (2 PDB entries)

PDB entries in Species: Klebsiella pneumoniae [TaxId: 272620]:

  1. Domain(s) for 3i3y:
    1. 2137808Domain d3i3ya1: 3i3y A:2-285 [211455]
      Other proteins in same PDB: d3i3ya2, d3i3yb2, d3i3yc2, d3i3yd2
      automated match to d2fv7a1
      complexed with gol, rib, so4
    2. 2137809Domain d3i3yb1: 3i3y B:2-285 [211456]
      Other proteins in same PDB: d3i3ya2, d3i3yb2, d3i3yc2, d3i3yd2
      automated match to d2fv7a1
      complexed with gol, rib, so4
    3. 2137810Domain d3i3yc1: 3i3y C:2-285 [211457]
      Other proteins in same PDB: d3i3ya2, d3i3yb2, d3i3yc2, d3i3yd2
      automated match to d2fv7a1
      complexed with gol, rib, so4
    4. 2137811Domain d3i3yd1: 3i3y D:2-285 [211458]
      Other proteins in same PDB: d3i3ya2, d3i3yb2, d3i3yc2, d3i3yd2
      automated match to d2fv7a1
      complexed with gol, rib, so4
  2. Domain(s) for 3ikh:
    1. 2137804Domain d3ikha1: 3ikh A:2-285 [211781]
      Other proteins in same PDB: d3ikha2, d3ikhb2, d3ikhc2, d3ikhd2
      automated match to d2fv7a1
      complexed with atp, gol
    2. 2137805Domain d3ikhb1: 3ikh B:2-285 [211782]
      Other proteins in same PDB: d3ikha2, d3ikhb2, d3ikhc2, d3ikhd2
      automated match to d2fv7a1
      complexed with atp, gol
    3. 2137806Domain d3ikhc1: 3ikh C:2-285 [211783]
      Other proteins in same PDB: d3ikha2, d3ikhb2, d3ikhc2, d3ikhd2
      automated match to d2fv7a1
      complexed with atp, gol
    4. 2137807Domain d3ikhd1: 3ikh D:2-285 [211784]
      Other proteins in same PDB: d3ikha2, d3ikhb2, d3ikhc2, d3ikhd2
      automated match to d2fv7a1
      complexed with atp, gol

More info for Species Klebsiella pneumoniae [TaxId:272620] from c.72.1.0 automated matches

Timeline for Species Klebsiella pneumoniae [TaxId:272620] from c.72.1.0 automated matches: