Lineage for Species: Sambucus nigra [TaxId: 4202]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2053108Fold b.42: beta-Trefoil [50352] (8 superfamilies)
    barrel, closed; n=6, S=12; and a hairpin triplet; meander
    duplication: has internal pseudo threefold symmetry
  4. 2053527Superfamily b.42.2: Ricin B-like lectins [50370] (4 families) (S)
  5. 2053753Family b.42.2.0: automated matches [227190] (1 protein)
    not a true family
  6. 2053754Protein automated matches [226913] (9 species)
    not a true protein
  7. 2053803Species Sambucus nigra [TaxId:4202] [225559] (8 PDB entries)

PDB entries in Species: Sambucus nigra [TaxId: 4202]:

  1. Domain(s) for 3c9z:
    1. 2053804Domain d3c9za1: 3c9z A:1-128 [208821]
      automated match to d1onkb1
      complexed with act, nag, so4
    2. 2053805Domain d3c9za2: 3c9z A:129-257 [208822]
      automated match to d1onkb2
      complexed with act, nag, so4
  2. Domain(s) for 3ca0:
    1. 2053818Domain d3ca0a1: 3ca0 A:1-128 [208823]
      automated match to d1onkb1
      complexed with act, so4
    2. 2053819Domain d3ca0a2: 3ca0 A:129-257 [208824]
      automated match to d1onkb2
      complexed with act, so4
  3. Domain(s) for 3ca1:
    1. 2053808Domain d3ca1a1: 3ca1 A:1-128 [208825]
      automated match to d1onkb1
      complexed with act, gla, nag, so4
    2. 2053809Domain d3ca1a2: 3ca1 A:129-257 [208826]
      automated match to d1onkb2
      complexed with act, gla, nag, so4
  4. Domain(s) for 3ca3:
    1. 2053812Domain d3ca3a1: 3ca3 A:1-128 [208827]
      automated match to d1onkb1
      complexed with a2g, act, nag, nga, so4
    2. 2053813Domain d3ca3a2: 3ca3 A:129-257 [208828]
      automated match to d1onkb2
      complexed with a2g, act, nag, nga, so4
  5. Domain(s) for 3ca4:
    1. 2053816Domain d3ca4a1: 3ca4 A:1-128 [208829]
      automated match to d1onkb1
      complexed with act, lat, nag, so4
    2. 2053817Domain d3ca4a2: 3ca4 A:129-257 [208830]
      automated match to d1onkb2
      complexed with act, lat, nag, so4
  6. Domain(s) for 3ca5:
    1. 2053814Domain d3ca5a1: 3ca5 A:1-128 [208831]
      automated match to d1onkb1
      complexed with act, amg, nag, so4
    2. 2053815Domain d3ca5a2: 3ca5 A:129-257 [208832]
      automated match to d1onkb2
      complexed with act, amg, nag, so4
  7. Domain(s) for 3ca6:
    1. 2053806Domain d3ca6a1: 3ca6 A:1-128 [208833]
      automated match to d1onkb1
      complexed with a2g, act, nag, ser, so4
    2. 2053807Domain d3ca6a2: 3ca6 A:129-257 [208834]
      automated match to d1onkb2
      complexed with a2g, act, nag, ser, so4
  8. Domain(s) for 3cah:
    1. 2053810Domain d3caha1: 3cah A:1-128 [208842]
      automated match to d1onkb1
      complexed with act, fca, nag, so4
    2. 2053811Domain d3caha2: 3cah A:129-257 [208843]
      automated match to d1onkb2
      complexed with act, fca, nag, so4

More info for Species Sambucus nigra [TaxId:4202] from b.42.2.0 automated matches

Timeline for Species Sambucus nigra [TaxId:4202] from b.42.2.0 automated matches: