Lineage for Species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2344609Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2355236Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2355237Protein automated matches [190740] (24 species)
    not a true protein
  7. 2358834Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [225523] (20 PDB entries)

PDB entries in Species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]:

  1. Domain(s) for 2rik:
    1. 2358835Domain d2rika1: 2rik A:-2-92 [243699]
      automated match to d1fhga_
    2. 2358836Domain d2rika2: 2rik A:93-186 [243700]
      automated match to d1fhga_
    3. 2358837Domain d2rika3: 2rik A:187-280 [243701]
      automated match to d1fhga_
  2. Domain(s) for 2rjm:
    1. 2358846Domain d2rjma1: 2rjm A:-2-92 [243714]
      automated match to d1fhga_
    2. 2358847Domain d2rjma2: 2rjm A:93-186 [243715]
      automated match to d1fhga_
    3. 2358848Domain d2rjma3: 2rjm A:187-280 [243716]
      automated match to d1fhga_
  3. Domain(s) for 2vuo:
    1. 2358842Domain d2vuoa1: 2vuo A:230-341 [206483]
      automated match to d1igyb3
      complexed with azi, fmt, gol
    2. 2358843Domain d2vuoa2: 2vuo A:342-444 [206484]
      automated match to d1igyb4
      complexed with azi, fmt, gol
    3. 2358844Domain d2vuob1: 2vuo B:231-341 [206485]
      automated match to d1igyb3
      complexed with azi, fmt, gol
    4. 2358845Domain d2vuob2: 2vuo B:342-444 [206486]
      automated match to d1igyb4
      complexed with azi, fmt, gol
  4. Domain(s) for 3nl4:
    1. 2358840Domain d3nl4l1: 3nl4 L:1-109 [306044]
      automated match to d4hbcl1
      complexed with so4
    2. 2358841Domain d3nl4l2: 3nl4 L:110-213 [306045]
      automated match to d4hbcl2
      complexed with so4
  5. Domain(s) for 4d3c:
  6. Domain(s) for 4hbc:
    1. 2358838Domain d4hbcl1: 4hbc L:1-109 [222477]
      complexed with so4
    2. 2358839Domain d4hbcl2: 4hbc L:110-213 [222478]
      complexed with so4
  7. Domain(s) for 4ht1:
  8. Domain(s) for 4jo1:
    1. 2358849Domain d4jo1l1: 4jo1 L:2-108 [252988]
      automated match to d4jo2m1
      complexed with ca
    2. 2358850Domain d4jo1l2: 4jo1 L:109-211 [252989]
      automated match to d4jo2m2
      complexed with ca
    3. 2358851Domain d4jo1m1: 4jo1 M:2-108 [252990]
      automated match to d4jo2m1
      complexed with ca
    4. 2358852Domain d4jo1m2: 4jo1 M:109-211 [252991]
      automated match to d4jo2m2
      complexed with ca
  9. Domain(s) for 4jo2:
    1. 2358871Domain d4jo2l1: 4jo2 L:2-108 [235020]
      automated match to d3lmjl1
      complexed with ca
    2. 2358872Domain d4jo2l2: 4jo2 L:109-211 [235021]
      automated match to d3lmjl2
      complexed with ca
    3. 2358873Domain d4jo2m1: 4jo2 M:2-108 [235018]
      automated match to d3lmjl1
      complexed with ca
    4. 2358874Domain d4jo2m2: 4jo2 M:109-211 [235019]
      automated match to d3lmjl2
      complexed with ca
  10. Domain(s) for 4jo3:
    1. 2358876Domain d4jo3l1: 4jo3 L:1-107 [235022]
      automated match to d2dtgb1
      complexed with so4
    2. 2358877Domain d4jo3l2: 4jo3 L:108-211 [235023]
      automated match to d2dtgb2
      complexed with so4
    3. 2358878Domain d4jo3m1: 4jo3 M:1-107 [235024]
      automated match to d2dtgb1
      complexed with so4
    4. 2358879Domain d4jo3m2: 4jo3 M:108-211 [235025]
      automated match to d2dtgb2
      complexed with so4
  11. Domain(s) for 4jo4:
    1. 2358863Domain d4jo4l1: 4jo4 L:1-107 [252992]
      automated match to d4jo3l1
      complexed with 1pe, so4
    2. 2358864Domain d4jo4l2: 4jo4 L:108-211 [252993]
      automated match to d4jo3l2
      complexed with 1pe, so4
    3. 2358865Domain d4jo4m1: 4jo4 M:1-107 [252994]
      automated match to d4jo3l1
      complexed with 1pe, so4
    4. 2358866Domain d4jo4m2: 4jo4 M:108-211 [252995]
      automated match to d4jo3l2
      complexed with 1pe, so4
  12. Domain(s) for 4ma3:
    1. 2358855Domain d4ma3a1: 4ma3 A:1-112 [238019]
      automated match to d3ngbc1
      complexed with act, so4
    2. 2358856Domain d4ma3a2: 4ma3 A:113-219 [238020]
      automated match to d3ngbc2
      complexed with act, so4
    3. 2358857Domain d4ma3l1: 4ma3 L:1-112 [238021]
      automated match to d3ngbc1
      complexed with act, so4
    4. 2358858Domain d4ma3l2: 4ma3 L:113-219 [238022]
      automated match to d3ngbc2
      complexed with act, so4
  13. Domain(s) for 4rzc:
    1. 2358881Domain d4rzcb_: 4rzc B: [279017]
      Other proteins in same PDB: d4rzca_, d4rzcc_, d4rzce_, d4rzch_
      automated match to d3t0va_
      complexed with m6p, so4
    2. 2358882Domain d4rzcd_: 4rzc D: [279018]
      Other proteins in same PDB: d4rzca_, d4rzcc_, d4rzce_, d4rzch_
      automated match to d3t0va_
      complexed with m6p, so4
    3. 2358883Domain d4rzcf_: 4rzc F: [279020]
      Other proteins in same PDB: d4rzca_, d4rzcc_, d4rzce_, d4rzch_
      automated match to d3t0va_
      complexed with m6p, so4
    4. 2358884Domain d4rzcl_: 4rzc L: [279019]
      Other proteins in same PDB: d4rzca_, d4rzcc_, d4rzce_, d4rzch_
      automated match to d3t0va_
      complexed with m6p, so4
  14. Domain(s) for 4ztp:
    1. 2358853Domain d4ztpl1: 4ztp L:1-107 [276213]
      automated match to d4jo4l1
    2. 2358854Domain d4ztpl2: 4ztp L:108-211 [276214]
      automated match to d4jo4l2
  15. Domain(s) for 5dhv:
    1. 2358867Domain d5dhva1: 5dhv A:1-116 [318699]
      Other proteins in same PDB: d5dhva2
      automated match to d4v1dd_
      complexed with cl
    2. 2358868Domain d5dhvb_: 5dhv B: [318721]
      Other proteins in same PDB: d5dhva2
      automated match to d3t0va_
      complexed with cl
    3. 2358869Domain d5dhvh_: 5dhv H: [318765]
      Other proteins in same PDB: d5dhva2
      automated match to d4v1dd_
      complexed with cl
    4. 2358870Domain d5dhvl_: 5dhv L: [318780]
      Other proteins in same PDB: d5dhva2
      automated match to d3t0va_
      complexed with cl
  16. Domain(s) for 5dhx:
    1. 2358889Domain d5dhxb1: 5dhx B:1-110 [344188]
      Other proteins in same PDB: d5dhxb2, d5dhxl3
      automated match to d3t0va_
    2. 2358890Domain d5dhxb3: 5dhx B:111-226 [344190]
      Other proteins in same PDB: d5dhxb2, d5dhxl3
    3. 2358891Domain d5dhxl1: 5dhx L:1-110 [344191]
      Other proteins in same PDB: d5dhxb2, d5dhxl3
      automated match to d3t0va_
    4. 2358892Domain d5dhxl2: 5dhx L:111-226 [344192]
      Other proteins in same PDB: d5dhxb2, d5dhxl3
  17. Domain(s) for 5dhy:
    1. 2358895Domain d5dhya_: 5dhy A: [318782]
      automated match to d4v1dd_
    2. 2358896Domain d5dhyb_: 5dhy B: [318766]
      automated match to d3t0va_
    3. 2358897Domain d5dhyh_: 5dhy H: [318785]
      automated match to d4v1dd_
    4. 2358898Domain d5dhyl_: 5dhy L: [318714]
      automated match to d3t0va_
  18. Domain(s) for 5drn:
    1. 2358859Domain d5drnb1: 5drn B:1-107 [313450]
      automated match to d4jo4l1
      complexed with 5ct, gol
    2. 2358860Domain d5drnb2: 5drn B:108-211 [313451]
      automated match to d4ztpl2
      complexed with 5ct, gol
    3. 2358861Domain d5drnl1: 5drn L:1-107 [313531]
      automated match to d4jo4l1
      complexed with 5ct, gol
    4. 2358862Domain d5drnl2: 5drn L:108-209 [313533]
      automated match to d4ztpl2
      complexed with 5ct, gol
  19. Domain(s) for 5m63:
    1. 2358885Domain d5m63l1: 5m63 L:24-134 [333832]
      automated match to d4jo4l1
      complexed with 7gw, bgc, edo, gal, nag, sia
    2. 2358886Domain d5m63l2: 5m63 L:135-238 [333833]
      automated match to d4ztpl2
      complexed with 7gw, bgc, edo, gal, nag, sia
    3. 2358887Domain d5m63n1: 5m63 N:24-134 [333869]
      automated match to d4jo4l1
      complexed with 7gw, bgc, edo, gal, nag, sia
    4. 2358888Domain d5m63n2: 5m63 N:135-239 [333870]
      automated match to d4ztpl2
      complexed with 7gw, bgc, edo, gal, nag, sia
  20. Domain(s) for 5th9:
    1. 2358893Domain d5th9l1: 5th9 L:1-106 [331474]
      Other proteins in same PDB: d5th9l2, d5th9m2, d5th9n_
      automated match to d1dn0a1
      complexed with ca, nco, zn
    2. 2358894Domain d5th9m1: 5th9 M:1-106 [331347]
      Other proteins in same PDB: d5th9l2, d5th9m2, d5th9n_
      automated match to d1dn0a1
      complexed with ca, nco, zn

More info for Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] from b.1.1.0 automated matches

Timeline for Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] from b.1.1.0 automated matches: