Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies) 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest |
Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) consists of one domain of this fold |
Family c.55.3.0: automated matches [191357] (1 protein) not a true family |
Protein automated matches [190396] (35 species) not a true protein |
Species Human immunodeficiency virus type 1 [TaxId:11706] [225515] (19 PDB entries) |
Domain d3di6a3: 3di6 A:430-555 [199235] Other proteins in same PDB: d3di6a2, d3di6b_ complexed with pdz |
Domain d3dm2a2: 3dm2 A:430-539 [239216] Other proteins in same PDB: d3dm2a1, d3dm2b_ automated match to d1bqna1 complexed with gwe, po4; mutant |
Domain d3dmja2: 3dmj A:430-539 [199254] Other proteins in same PDB: d3dmja1, d3dmjb_ automated match to d1bqna1 complexed with gwe, po4; mutant |
Domain d3doka2: 3dok A:430-539 [199256] Other proteins in same PDB: d3doka1, d3dokb_ automated match to d1bqna1 complexed with gwj, po4; mutant |
Domain d3drpa3: 3drp A:430-557 [199266] Other proteins in same PDB: d3drpa2, d3drpa4, d3drpb_ automated match to d1bqna1 complexed with r8e |
Domain d3drra3: 3drr A:430-557 [199268] Other proteins in same PDB: d3drra2, d3drra4, d3drrb_ complexed with r8e; mutant |
Domain d3drsa3: 3drs A:430-548 [199270] Other proteins in same PDB: d3drsa2, d3drsa4, d3drsb_ complexed with r8d; mutant |
Domain d3dyaa2: 3dya A:430-555 [232042] Other proteins in same PDB: d3dyaa1, d3dyab_ automated match to d3di6a3 complexed with pzl |
Domain d3e01a2: 3e01 A:430-556 [232044] Other proteins in same PDB: d3e01a1, d3e01b_ automated match to d3di6a3 complexed with pz2 |
Domain d3kjva2: 3kjv A:430-556 [247215] Other proteins in same PDB: d3kjva1, d3kjvb_ automated match to d1bqna1 protein/DNA complex; complexed with mg, so4 |
Domain d3kk1a2: 3kk1 A:430-555 [199618] Other proteins in same PDB: d3kk1a1, d3kk1b_ automated match to d1bqna1 protein/DNA complex; complexed with 914, mg, so4 |
Domain d3kk2a2: 3kk2 A:430-555 [199620] Other proteins in same PDB: d3kk2a1, d3kk2b_ automated match to d1bqna1 protein/DNA complex; complexed with dtp, mg, so4 |
Domain d3kk3a2: 3kk3 A:430-555 [199622] Other proteins in same PDB: d3kk3a1, d3kk3b_ automated match to d1bqna1 protein/DNA complex; complexed with mg, so4 |
Domain d3lp0a2: 3lp0 A:430-557 [199755] Other proteins in same PDB: d3lp0a1, d3lp0a3, d3lp0b_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with lp7, mn, nvp |
Domain d3lp1a2: 3lp1 A:430-557 [199757] Other proteins in same PDB: d3lp1a1, d3lp1a3, d3lp1b_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with lp8, mn, nvp |
Domain d3lp2a2: 3lp2 A:430-557 [199759] Other proteins in same PDB: d3lp2a1, d3lp2a3, d3lp2b_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with lp9, mn |
Domain d3m8pa2: 3m8p A:430-555 [232904] Other proteins in same PDB: d3m8pa1, d3m8pb_ automated match to d3di6a3 complexed with 65b |
Domain d3m8qa2: 3m8q A:430-557 [232906] Other proteins in same PDB: d3m8qa1, d3m8qb_ automated match to d3di6a3 complexed with djz |
Domain d3nbpa2: 3nbp A:430-557 [232996] Other proteins in same PDB: d3nbpa1, d3nbpb_ automated match to d3di6a3 complexed with jgz, mn |
Timeline for Species Human immunodeficiency virus type 1 [TaxId:11706] from c.55.3.0 automated matches: