Lineage for Species: Shewanella oneidensis [TaxId: 70863]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2164557Fold d.21: Diaminopimelate epimerase-like [54505] (1 superfamily)
    mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix
  4. 2164558Superfamily d.21.1: Diaminopimelate epimerase-like [54506] (5 families) (S)
    duplication: consists of two similar domain swapped with C-terminal strands
  5. 2164670Family d.21.1.0: automated matches [191386] (1 protein)
    not a true family
  6. 2164671Protein automated matches [190491] (15 species)
    not a true protein
  7. 2164714Species Shewanella oneidensis [TaxId:70863] [225314] (3 PDB entries)

PDB entries in Species: Shewanella oneidensis [TaxId: 70863]:

  1. Domain(s) for 2pvz:
    1. 2164719Domain d2pvza1: 2pvz A:5-185 [205656]
      automated match to d2h9fa1
      complexed with ca, edo
    2. 2164720Domain d2pvza2: 2pvz A:186-397 [205657]
      automated match to d2h9fa2
      complexed with ca, edo
    3. 2164721Domain d2pvzb1: 2pvz B:5-185 [205658]
      automated match to d2h9fa1
      complexed with ca, edo
    4. 2164722Domain d2pvzb2: 2pvz B:186-397 [205659]
      automated match to d2h9fa2
      complexed with ca, edo
  2. Domain(s) for 2pw0:
    1. 2164715Domain d2pw0a1: 2pw0 A:6-185 [205660]
      automated match to d2h9fa1
      complexed with edo, trc
    2. 2164716Domain d2pw0a2: 2pw0 A:186-397 [205661]
      automated match to d2h9fa2
      complexed with edo, trc
    3. 2164717Domain d2pw0b1: 2pw0 B:5-185 [205662]
      automated match to d2h9fa1
      complexed with edo, trc
    4. 2164718Domain d2pw0b2: 2pw0 B:186-397 [205663]
      automated match to d2h9fa2
      complexed with edo, trc
  3. Domain(s) for 5k87:
    1. 2291558Domain d5k87a2: 5k87 A:186-397 [334859]
      automated match to d2pw0a2
      complexed with mli
    2. 2291614Domain d5k87b1: 5k87 B:5-185 [334915]
      automated match to d2pw0b1
      complexed with mli
    3. 2291615Domain d5k87b2: 5k87 B:186-397 [334916]
      automated match to d2pw0a2
      complexed with mli

More info for Species Shewanella oneidensis [TaxId:70863] from d.21.1.0 automated matches

Timeline for Species Shewanella oneidensis [TaxId:70863] from d.21.1.0 automated matches: