Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies) 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest |
Superfamily c.55.3: Ribonuclease H-like [53098] (18 families) consists of one domain of this fold |
Family c.55.3.0: automated matches [191357] (1 protein) not a true family |
Protein automated matches [190396] (40 species) not a true protein |
Species Hiv-1 m:b_hxb2r [TaxId:11706] [225268] (21 PDB entries) |
Domain d2oppa3: 2opp A:430-539 [198207] Other proteins in same PDB: d2oppa2, d2oppb_ complexed with hbq, mg, po4 |
Domain d2opqa2: 2opq A:430-537 [198209] Other proteins in same PDB: d2opqa1, d2opqb_ automated match to d1vrta1 complexed with hbq, po4; mutant |
Domain d2opra2: 2opr A:430-548 [198211] Other proteins in same PDB: d2opra1, d2oprb_ automated match to d1rtda1 complexed with hbq; mutant |
Domain d2opsa3: 2ops A:430-543 [198213] Other proteins in same PDB: d2opsa2, d2opsb_ complexed with hbq, po4; mutant |
Domain d2rf2a3: 2rf2 A:430-557 [198340] Other proteins in same PDB: d2rf2a2, d2rf2b_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with mrx |
Domain d2ynfa2: 2ynf A:430-558 [207670] Other proteins in same PDB: d2ynfa1, d2ynfa3, d2ynfb_ automated match to d1bqna1 complexed with mg, tar, whu; mutant |
Domain d2ynga2: 2yng A:430-558 [207673] Other proteins in same PDB: d2ynga1, d2ynga3, d2yngb_ automated match to d1bqna1 complexed with mg, srt, whu |
Domain d2ynha2: 2ynh A:430-558 [207676] Other proteins in same PDB: d2ynha1, d2ynha3, d2ynhb_ automated match to d1bqna1 complexed with eur, tar |
Domain d2ynia2: 2yni A:430-558 [207679] Other proteins in same PDB: d2ynia1, d2ynia3, d2ynib_ automated match to d1bqna1 complexed with cxd, mg, tar |
Domain d3c6ta3: 3c6t A:430-557 [199171] Other proteins in same PDB: d3c6ta2, d3c6ta4, d3c6tb_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with m14 |
Domain d3c6ua3: 3c6u A:430-557 [199173] Other proteins in same PDB: d3c6ua2, d3c6ua4, d3c6ub_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with m22 |
Domain d3ffia2: 3ffi A:430-553 [199403] Other proteins in same PDB: d3ffia1, d3ffib_ automated match to d1bqna1 complexed with 3ob |
Domain d3i0ra2: 3i0r A:430-544 [199537] Other proteins in same PDB: d3i0ra1, d3i0ra3, d3i0rb_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with rt3 |
Domain d3i0sa2: 3i0s A:430-557 [199539] Other proteins in same PDB: d3i0sa1, d3i0sa3, d3i0sb_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with rt7 |
Domain d3meda2: 3med A:430-552 [199832] Other proteins in same PDB: d3meda1, d3medb_ automated match to d1bqna1 complexed with 65b, cl, so4 |
Domain d3mega2: 3meg A:430-552 [199836] Other proteins in same PDB: d3mega1, d3megb_ automated match to d1bqna1 complexed with so4, t27 |
Domain d3t19a2: 3t19 A:430-557 [216636] Other proteins in same PDB: d3t19a1, d3t19a3, d3t19b_ automated match to d1bqna1 complexed with 5ma |
Domain d3t1aa2: 3t1a A:430-557 [216638] Other proteins in same PDB: d3t1aa1, d3t1aa3, d3t1ab_ automated match to d1bqna1 complexed with 5ma; mutant |
Domain d3tama2: 3tam A:430-557 [200791] Other proteins in same PDB: d3tama1, d3tama3, d3tamb_ automated match to d1bqna1 complexed with m06; mutant |
Domain d4kv8a2: 4kv8 A:430-554 [224482] Other proteins in same PDB: d4kv8a1, d4kv8b_ automated match to d1bqna1 complexed with 1wt, mla |
Domain d4ncga2: 4ncg A:430-556 [236816] Other proteins in same PDB: d4ncga1, d4ncgb_ automated match to d2rf2a3 complexed with 2kw; mutant |
Timeline for Species Hiv-1 m:b_hxb2r [TaxId:11706] from c.55.3.0 automated matches: