Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies) 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest |
Superfamily c.55.3: Ribonuclease H-like [53098] (16 families) consists of one domain of this fold |
Family c.55.3.0: automated matches [191357] (1 protein) not a true family |
Protein automated matches [190396] (40 species) not a true protein |
Species Human immunodeficiency virus 1 [TaxId:11676] [225129] (16 PDB entries) |
Domain d2hnda2: 2hnd A:430-537 [204627] Other proteins in same PDB: d2hnda1, d2hndb_ automated match to d1vrta1 complexed with mg, nvp, po4; mutant |
Domain d2hnya2: 2hny A:430-537 [204630] Other proteins in same PDB: d2hnya1, d2hnyb_ automated match to d1vrta1 complexed with mg, nvp, po4; mutant |
Domain d2hnza2: 2hnz A:430-537 [242051] Other proteins in same PDB: d2hnza1, d2hnzb_ automated match to d3dlga2 complexed with pc0, po4; mutant |
Domain d2i5ja2: 2i5j A:430-552 [238682] Other proteins in same PDB: d2i5ja1, d2i5jb_ automated match to d2ykna2 protein/RNA complex; complexed with glc, k05, mg, suc |
Domain d2jlea2: 2jle A:430-545 [205112] Other proteins in same PDB: d2jlea1, d2jleb_ automated match to d1bqna1 complexed with i15 |
Domain d2vg5a2: 2vg5 A:430-557 [198438] Other proteins in same PDB: d2vg5a1, d2vg5b_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with nnc |
Domain d2vg6a2: 2vg6 A:430-551 [238890] Other proteins in same PDB: d2vg6a1, d2vg6b_ automated match to d2ykna2 protein/DNA complex; protein/RNA complex; complexed with nnb |
Domain d2vg7a2: 2vg7 A:430-551 [198440] Other proteins in same PDB: d2vg7a1, d2vg7b_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with nni |
Domain d2zd1a2: 2zd1 A:430-552 [198799] Other proteins in same PDB: d2zd1a1, d2zd1a3, d2zd1b_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with edo, so4, t27 |
Domain d2ze2a2: 2ze2 A:430-552 [198801] Other proteins in same PDB: d2ze2a1, d2ze2b_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with t27; mutant |
Domain d3bgra2: 3bgr A:430-552 [199092] Other proteins in same PDB: d3bgra1, d3bgra3, d3bgrb_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with edo, t27; mutant |
Domain d4kkoa2: 4kko A:430-552 [227598] Other proteins in same PDB: d4kkoa1, d4kkoa3, d4kkob_ automated match to d2zd1a2 complexed with 1re |
Domain d4lsla2: 4lsl A:430-548 [230149] Other proteins in same PDB: d4lsla1, d4lslb_ automated match to d2zd1a2 complexed with 1yq |
Domain d4mfba2: 4mfb A:430-547 [228815] Other proteins in same PDB: d4mfba1, d4mfbb_ automated match to d2zd1a2 complexed with 29t |
Domain d4zhra2: 4zhr A:430-553 [279398] Other proteins in same PDB: d4zhra1, d4zhrb_ automated match to d1bqna1 mutant |
Domain d5fdla2: 5fdl A:430-554 [314386] Other proteins in same PDB: d5fdla1, d5fdlb_ automated match to d1bqna1 complexed with 5dv; mutant |
Timeline for Species Human immunodeficiency virus 1 [TaxId:11676] from c.55.3.0 automated matches: