SCOPe 2.08: Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
sandwich; 7 strands in 2 sheets; greek-key
some members of the fold have additional strands
Superfamily b.1.1: Immunoglobulin [48726] (5 families)
Family b.1.1.0: automated matches [191470] (1 protein)
not a true family
Protein automated matches [190740] (31 species)
not a true protein
Species Norway rat (Rattus norvegicus) [TaxId:10116] [225064] (19 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

Domain(s) for 1zan:
1. Domain d1zanh_: 1zan H: [407996]
  automated match to d6shgh_
  complexed with cl
2. Domain d1zanl1: 1zan L:1-108 [203312]
  automated match to d1cica1
  complexed with cl
3. Domain d1zanl2: 1zan L:109-214 [203313]
  automated match to d1e4wl2
  complexed with cl
Domain(s) for 2iep:
1. Domain d2iepa1: 2iep A:24-118 [264312]
  automated match to d4c4ko_
  complexed with so4
2. Domain d2iepa2: 2iep A:119-210 [264313]
  automated match to d4c4ko_
  complexed with so4
3. Domain d2iepb1: 2iep B:25-118 [264314]
  automated match to d4c4ko_
  complexed with so4
4. Domain d2iepb2: 2iep B:119-211 [264315]
  automated match to d4c4ko_
  complexed with so4
Domain(s) for 3u9p:
1. Domain d3u9ph_: 3u9p H: [408712]
  Other proteins in same PDB: d3u9pc_, d3u9pd_
  automated match to d6shgh_
2. Domain d3u9pk_: 3u9p K: [408713]
  Other proteins in same PDB: d3u9pc_, d3u9pd_
  automated match to d6shgh_
3. Domain d3u9pl1: 3u9p L:1-107 [233773]
  Other proteins in same PDB: d3u9pc_, d3u9pd_
  automated match to d1l7tl1
4. Domain d3u9pl2: 3u9p L:108-212 [233774]
  Other proteins in same PDB: d3u9pc_, d3u9pd_
  automated match to d1l7tl2
5. Domain d3u9pm1: 3u9p M:1-107 [233771]
  Other proteins in same PDB: d3u9pc_, d3u9pd_
  automated match to d1l7tl1
6. Domain d3u9pm2: 3u9p M:108-211 [233772]
  Other proteins in same PDB: d3u9pc_, d3u9pd_
  automated match to d1l7tl2
Domain(s) for 4uao:
- Domain d4uaob1: 4uao B:1-107 [271997]
  Other proteins in same PDB: d4uaob2, d4uaoc_
  automated match to d1c5da1
Domain(s) for 4wht:
1. Domain d4whtb1: 4wht B:1-111 [262078]
  Other proteins in same PDB: d4whtb2, d4whtd2, d4whtl2, d4whtn2, d4whtp2, d4whtr2, d4whtt2, d4whtv2, d4whty2
  automated match to d1c5da1
2. Domain d4whtd1: 4wht D:1-111 [262074]
  Other proteins in same PDB: d4whtb2, d4whtd2, d4whtl2, d4whtn2, d4whtp2, d4whtr2, d4whtt2, d4whtv2, d4whty2
  automated match to d1c5da1
3. Domain d4whtf1: 4wht F:1-111 [262075]
  Other proteins in same PDB: d4whtb2, d4whtd2, d4whtl2, d4whtn2, d4whtp2, d4whtr2, d4whtt2, d4whtv2, d4whty2
  automated match to d1c5da1
4. Domain d4whth1: 4wht H:0-111 [262073]
  Other proteins in same PDB: d4whtb2, d4whtd2, d4whtl2, d4whtn2, d4whtp2, d4whtr2, d4whtt2, d4whtv2, d4whty2
  automated match to d1c5da1
5. Domain d4whtj1: 4wht J:1-111 [262076]
  Other proteins in same PDB: d4whtb2, d4whtd2, d4whtl2, d4whtn2, d4whtp2, d4whtr2, d4whtt2, d4whtv2, d4whty2
  automated match to d1c5da1
6. Domain d4whtl1: 4wht L:1-111 [262077]
  Other proteins in same PDB: d4whtb2, d4whtd2, d4whtl2, d4whtn2, d4whtp2, d4whtr2, d4whtt2, d4whtv2, d4whty2
  automated match to d1c5da1
7. Domain d4whtn1: 4wht N:1-111 [262089]
  Other proteins in same PDB: d4whtb2, d4whtd2, d4whtl2, d4whtn2, d4whtp2, d4whtr2, d4whtt2, d4whtv2, d4whty2
  automated match to d1c5da1
8. Domain d4whtp1: 4wht P:1-111 [262093]
  Other proteins in same PDB: d4whtb2, d4whtd2, d4whtl2, d4whtn2, d4whtp2, d4whtr2, d4whtt2, d4whtv2, d4whty2
  automated match to d1c5da1
9. Domain d4whtr1: 4wht R:1-111 [262091]
  Other proteins in same PDB: d4whtb2, d4whtd2, d4whtl2, d4whtn2, d4whtp2, d4whtr2, d4whtt2, d4whtv2, d4whty2
  automated match to d1c5da1
10. Domain d4whtt1: 4wht T:1-111 [264105]
  Other proteins in same PDB: d4whtb2, d4whtd2, d4whtl2, d4whtn2, d4whtp2, d4whtr2, d4whtt2, d4whtv2, d4whty2
  automated match to d1c5da1
11. Domain d4whtv1: 4wht V:1-111 [264107]
  Other proteins in same PDB: d4whtb2, d4whtd2, d4whtl2, d4whtn2, d4whtp2, d4whtr2, d4whtt2, d4whtv2, d4whty2
  automated match to d1c5da1
12. Domain d4whty1: 4wht Y:1-111 [264109]
  Other proteins in same PDB: d4whtb2, d4whtd2, d4whtl2, d4whtn2, d4whtp2, d4whtr2, d4whtt2, d4whtv2, d4whty2
  automated match to d1c5da1
Domain(s) for 4yny:
1. Domain d4ynyb1: 4yny B:20-129 [312237]
  Other proteins in same PDB: d4ynya_, d4ynyc_
  automated match to d2mcg11
2. Domain d4ynyb2: 4yny B:130-229 [312238]
  Other proteins in same PDB: d4ynya_, d4ynyc_
  automated match to d2fb4l2
3. Domain d4ynyd1: 4yny D:20-129 [312407]
  Other proteins in same PDB: d4ynya_, d4ynyc_
  automated match to d2mcg11
4. Domain d4ynyd2: 4yny D:130-229 [312408]
  Other proteins in same PDB: d4ynya_, d4ynyc_
  automated match to d2fb4l2
Domain(s) for 5hbt:
- Domain d5hbtc1: 5hbt C:1-106 [333717]
  Other proteins in same PDB: d5hbta_, d5hbtb1, d5hbtb2, d5hbtc2
  automated match to d1c5da1
Domain(s) for 5hbv:
- Domain d5hbvc1: 5hbv C:1-106 [333853]
  Other proteins in same PDB: d5hbva_, d5hbvb1, d5hbvb2, d5hbvc2
  automated match to d1c5da1
Domain(s) for 5w5x:
1. Domain d5w5xl1: 5w5x L:1-106 [354104]
  Other proteins in same PDB: d5w5xa_, d5w5xh_
  automated match to d3b9kc1
  complexed with edo, zn
2. Domain d5w5xl2: 5w5x L:107-212 [354105]
  Other proteins in same PDB: d5w5xa_, d5w5xh_
  automated match to d3b9kc2
  complexed with edo, zn
Domain(s) for 5w5z:
1. Domain d5w5zl1: 5w5z L:1-106 [354067]
  Other proteins in same PDB: d5w5zh_
  automated match to d3b9kc1
  complexed with edo, mes, pg4, pge
2. Domain d5w5zl2: 5w5z L:107-212 [354068]
  Other proteins in same PDB: d5w5zh_
  automated match to d3b9kc2
  complexed with edo, mes, pg4, pge
Domain(s) for 6al0:
1. Domain d6al0l1: 6al0 L:20-129 [364780]
  Other proteins in same PDB: d6al0h_
  automated match to d2mcg11
2. Domain d6al0l2: 6al0 L:130-233 [364781]
  Other proteins in same PDB: d6al0h_
  automated match to d2fb4l2
Domain(s) for 6e62:
1. Domain d6e62c1: 6e62 C:1-107 [360653]
  Other proteins in same PDB: d6e62b_, d6e62h_
  automated match to d4k3el1
  complexed with gol, nag
2. Domain d6e62c2: 6e62 C:108-209 [360654]
  Other proteins in same PDB: d6e62b_, d6e62h_
  automated match to d4k3dl2
  complexed with gol, nag
3. Domain d6e62l1: 6e62 L:1-107 [360706]
  Other proteins in same PDB: d6e62b_, d6e62h_
  automated match to d4k3el1
  complexed with gol, nag
4. Domain d6e62l2: 6e62 L:108-209 [360707]
  Other proteins in same PDB: d6e62b_, d6e62h_
  automated match to d4k3dl2
  complexed with gol, nag
Domain(s) for 6e64:
1. Domain d6e64b1: 6e64 B:1-107 [360698]
  Other proteins in same PDB: d6e64a_, d6e64h_
  automated match to d4k3el1
2. Domain d6e64b2: 6e64 B:108-209 [360699]
  Other proteins in same PDB: d6e64a_, d6e64h_
  automated match to d4k3dl2
3. Domain d6e64l1: 6e64 L:1-107 [360600]
  Other proteins in same PDB: d6e64a_, d6e64h_
  automated match to d4k3el1
4. Domain d6e64l2: 6e64 L:108-209 [360601]
  Other proteins in same PDB: d6e64a_, d6e64h_
  automated match to d4k3dl2
Domain(s) for 6icc:
1. Domain d6iccl1: 6icc L:20-129 [364931]
  Other proteins in same PDB: d6icch_
  automated match to d2mcg11
2. Domain d6iccl2: 6icc L:130-233 [364932]
  Other proteins in same PDB: d6icch_
  automated match to d2fb4l2
Domain(s) for 6oor:
1. Domain d6oorl1: 6oor L:1-112 [371227]
  Other proteins in same PDB: d6oora1, d6oorb_, d6oorh_
  automated match to d1sy6l1
  complexed with na, unl
2. Domain d6oorl2: 6oor L:113-219 [371228]
  Other proteins in same PDB: d6oora1, d6oorb_, d6oorh_
  automated match to d1z3gl2
  complexed with na, unl
Domain(s) for 6qig:
- Domain d6qigl1: 6qig L:1-107 [373785]
  Other proteins in same PDB: d6qigh_, d6qigl2
  automated match to d1c12a1
  complexed with ca, cl, fuc, gol, man, nag, peg, zn
Domain(s) for 6xsw:
1. Domain d6xswb_: 6xsw B: [417155]
  Other proteins in same PDB: d6xswa_, d6xswd_, d6xswg_, d6xswh_
  automated match to d6shgl_
  complexed with ca, nag
2. Domain d6xswe_: 6xsw E: [417157]
  Other proteins in same PDB: d6xswa_, d6xswd_, d6xswg_, d6xswh_
  automated match to d6shgl_
  complexed with ca, nag
3. Domain d6xswi_: 6xsw I: [417160]
  Other proteins in same PDB: d6xswa_, d6xswd_, d6xswg_, d6xswh_
  automated match to d6shgl_
  complexed with ca, nag
4. Domain d6xswl_: 6xsw L: [417161]
  Other proteins in same PDB: d6xswa_, d6xswd_, d6xswg_, d6xswh_
  automated match to d6shgl_
  complexed with ca, nag
Domain(s) for 7cqc:
1. Domain d7cqcl1: 7cqc L:20-129 [404936]
  Other proteins in same PDB: d7cqch_
  automated match to d2mcg11
2. Domain d7cqcl2: 7cqc L:130-233 [404937]
  Other proteins in same PDB: d7cqch_
  automated match to d2fb4l2
Domain(s) for 7kq7:
- Domain d7kq7l1: 7kq7 L:1-110 [402172]
  Other proteins in same PDB: d7kq7h_, d7kq7l2
  automated match to d1dn0a1

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.0 automated matches

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.0 automated matches:

Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.0 automated matches first appeared in SCOPe 2.03
Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.1.1.0 automated matches appears in SCOPe 2.07