Lineage for d2rama2 (2ram A:19-191)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2363595Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. 2364216Superfamily b.2.5: p53-like transcription factors [49417] (8 families) (S)
  5. 2364474Family b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain [81315] (7 protein domains)
    automatically mapped to Pfam PF00554
  6. 2364498Protein p65 subunit of NF-kappa B (NFKB), N-terminal domain [49428] (3 species)
  7. 2364505Species Mouse (Mus musculus) [TaxId:10090] [49429] (8 PDB entries)
  8. 2364507Domain d2rama2: 2ram A:19-191 [22450]
    Other proteins in same PDB: d2rama1, d2ramb1
    protein/DNA complex; complexed with dtv

Details for d2rama2

PDB Entry: 2ram (more details), 2.4 Å

PDB Description: a novel dna recognition mode by nf-kb p65 homodimer
PDB Compounds: (A:) protein (transcription factor nf-kb p65)

SCOPe Domain Sequences for d2rama2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2rama2 b.2.5.3 (A:19-191) p65 subunit of NF-kappa B (NFKB), N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

SCOPe Domain Coordinates for d2rama2:

Click to download the PDB-style file with coordinates for d2rama2.
(The format of our PDB-style files is described here.)

Timeline for d2rama2:

View in 3D
Domains from same chain:
(mouse over for more information)