Lineage for d1vkxb2 (1vkx B:339-546)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2033752Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. 2034243Superfamily b.2.5: p53-like transcription factors [49417] (8 families) (S)
  5. 2034491Family b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain [81315] (7 protein domains)
    automatically mapped to Pfam PF00554
  6. 2034495Protein p50 subunit of NF-kappa B (NFKB), N-terminal domain [49423] (2 species)
  7. 2034499Species Mouse (Mus musculus) [TaxId:10090] [49425] (7 PDB entries)
  8. 2034506Domain d1vkxb2: 1vkx B:339-546 [22446]
    Other proteins in same PDB: d1vkxa1, d1vkxa2, d1vkxb1
    protein/DNA complex

Details for d1vkxb2

PDB Entry: 1vkx (more details), 2.9 Å

PDB Description: crystal structure of the nfkb p50/p65 heterodimer complexed to the immunoglobulin kb dna
PDB Compounds: (B:) protein (nf-kappa b p50 subunit)

SCOPe Domain Sequences for d1vkxb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vkxb2 b.2.5.3 (B:339-546) p50 subunit of NF-kappa B (NFKB), N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

SCOPe Domain Coordinates for d1vkxb2:

Click to download the PDB-style file with coordinates for d1vkxb2.
(The format of our PDB-style files is described here.)

Timeline for d1vkxb2:

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