SCOPe 2.08: Domain d4k62c1: 4k62 C:5-324

Lineage for d4k62c1 (4k62 C:5-324)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (4 families)
   forms homotrimers

5. Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 proteins)

6. Protein Hemagglutinin [49824] (22 species)
   includes rudiment esterase domain

7. Species Influenza A virus, different strains [TaxId:11320] [49825] (131 PDB entries)

8. Domain d4k62c1: 4k62 C:5-324 [224172]
   Other proteins in same PDB: d4k62a2, d4k62b_, d4k62c2, d4k62d_, d4k62e2, d4k62f_, d4k62g2, d4k62h_
   automated match to d4k64a_
   complexed with nag

Details for d4k62c1

PDB Entry: 4k62, 2.5 Å

PDB Description: structure of an avian influenza h5 hemagglutinin from the influenza virus a/indonesia/5/2005

PDB Compounds: (C:) Hemagglutinin

SCOPe Domain Sequences for d4k62c1:

Sequence; same for both SEQRES and ATOM records:

>d4k62c1 b.19.1.2 (C:5-324) Hemagglutinin {Influenza A virus, different strains [TaxId: 11320]}
dqicigyhannsteqvdtimeknvtvthaqdilekthngklcdldgvkplilrdcsvagw
llgnpmcdefinvpewsyivekanptndlcypgsfndyeelkhllsrinhfekiqiipks
swsdheassgvssacpylgspsffrnvvwlikknstyptikksynntnqedllvlwgihh
pndaaeqtrlyqnpttyisigtstlnqrlvpkiatrskvngqsgrmeffwtilkpndain
fesngnfiapeyaykivkkgdsaimkseleygncntkcqtpmgainssmpfhnihpltig
ecpkyvksnrlvlatglrns

Timeline for d4k62c1:

• d4k62c1 first appeared in SCOPe 2.03, called d4k62c_
  
• d4k62c1 appears in SCOPe 2.07