Lineage for d4k62a1 (4k62 A:5-324)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2040266Fold b.19: Viral protein domain [49817] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. 2040267Superfamily b.19.1: Viral protein domain [49818] (4 families) (S)
    forms homotrimers
  5. 2040314Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 protein domains)
  6. 2040315Protein Hemagglutinin [49824] (9 species)
    includes rudiment esterase domain
  7. 2040355Species Influenza A virus, different strains [TaxId:11320] [49825] (116 PDB entries)
  8. 2040450Domain d4k62a1: 4k62 A:5-324 [224171]
    Other proteins in same PDB: d4k62a2, d4k62b_, d4k62c2, d4k62d_, d4k62e2, d4k62f_, d4k62g2, d4k62h_
    automated match to d4k64a_
    complexed with nag

Details for d4k62a1

PDB Entry: 4k62 (more details), 2.5 Å

PDB Description: Structure of an avian influenza H5 hemagglutinin from the influenza virus A/Indonesia/5/2005
PDB Compounds: (A:) Hemagglutinin

SCOPe Domain Sequences for d4k62a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4k62a1 b.19.1.2 (A:5-324) Hemagglutinin {Influenza A virus, different strains [TaxId: 11320]}
dqicigyhannsteqvdtimeknvtvthaqdilekthngklcdldgvkplilrdcsvagw
llgnpmcdefinvpewsyivekanptndlcypgsfndyeelkhllsrinhfekiqiipks
swsdheassgvssacpylgspsffrnvvwlikknstyptikksynntnqedllvlwgihh
pndaaeqtrlyqnpttyisigtstlnqrlvpkiatrskvngqsgrmeffwtilkpndain
fesngnfiapeyaykivkkgdsaimkseleygncntkcqtpmgainssmpfhnihpltig
ecpkyvksnrlvlatglrns

SCOPe Domain Coordinates for d4k62a1:

Click to download the PDB-style file with coordinates for d4k62a1.
(The format of our PDB-style files is described here.)

Timeline for d4k62a1: